RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 C8orf37Q96NL8 207 aa4.59□□□□□ -1.67
MCF2-202ENST00000370573 KRTAP4-6Q9BYQ5 205 aa4.59□□□□□ -1.67
MCF2-202ENST00000370573 GDF2Q9UK05 429 aaPredicted RBP4.59□□□□□ -1.67
MCF2-202ENST00000370573 SPATA31A6Q5VVP1 1343 aa4.59□□□□□ -1.67
MCF2-202ENST00000370573 MEGF6O75095 1541 aa4.59□□□□□ -1.67
MCF2-202ENST00000370573 SLIT2O94813 1529 aa4.59□□□□□ -1.67
MCF2-202ENST00000370573 EFSO43281 561 aa4.59□□□□□ -1.67
MCF2-202ENST00000370573 KCNMA1Q12791 1236 aa4.59□□□□□ -1.67
MCF2-202ENST00000370573 IL17REQ8NFR9 667 aa4.59□□□□□ -1.67
MCF2-202ENST00000370573 RAPGEF4Q8WZA2 1011 aa4.59□□□□□ -1.67
MCF2-202ENST00000370573 SCARF2Q96GP6 870 aaPredicted RBP4.59□□□□□ -1.67
MCF2-202ENST00000370573 BRD7Q9NPI1 651 aa4.59□□□□□ -1.67
MCF2-202ENST00000370573 KLK14Q9P0G3 267 aa4.59□□□□□ -1.67
MCF2-202ENST00000370573 GNAT3A8MTJ3 354 aa4.59□□□□□ -1.68
MCF2-202ENST00000370573 PRMT3O60678 531 aa4.59□□□□□ -1.68
MCF2-202ENST00000370573 ZNF853P0CG23 659 aa4.59□□□□□ -1.68
MCF2-202ENST00000370573 VAMP1P23763 118 aa4.59□□□□□ -1.68
MCF2-202ENST00000370573 HIRAP54198 1017 aaPredicted RBP4.59□□□□□ -1.68
MCF2-202ENST00000370573 AMOTQ4VCS5 1084 aa4.59□□□□□ -1.68
MCF2-202ENST00000370573 C1orf53Q5VUE5 145 aa4.59□□□□□ -1.68
MCF2-202ENST00000370573 ZNF530Q6P9A1 599 aaPredicted RBP4.59□□□□□ -1.68
MCF2-202ENST00000370573 SLC30A3Q99726 388 aa4.59□□□□□ -1.68
MCF2-202ENST00000370573 LGR6Q9HBX8 967 aa4.59□□□□□ -1.68
MCF2-202ENST00000370573 IL16Q14005 1332 aa4.58□□□□□ -1.68
MCF2-202ENST00000370573 PLCH1Q4KWH8 1693 aa4.58□□□□□ -1.68
MCF2-202ENST00000370573 CRB1P82279 1406 aa4.58□□□□□ -1.68
MCF2-202ENST00000370573 HTATSF1O43719 755 aaKnown RBP4.58□□□□□ -1.68
MCF2-202ENST00000370573 ABL1P00519 1130 aa4.58□□□□□ -1.68
MCF2-202ENST00000370573 LMOD3Q0VAK6 560 aa4.58□□□□□ -1.68
MCF2-202ENST00000370573 OCLNQ16625 522 aa4.58□□□□□ -1.68
MCF2-202ENST00000370573 SAMD5Q5TGI4 173 aa4.58□□□□□ -1.68
MCF2-202ENST00000370573 POTEAQ6S8J7 498 aa4.58□□□□□ -1.68
MCF2-202ENST00000370573 SYT9Q86SS6 491 aa4.58□□□□□ -1.68
MCF2-202ENST00000370573 FCHSD1Q86WN1 690 aa4.58□□□□□ -1.68
MCF2-202ENST00000370573 BEND7Q8N7W2 519 aaPredicted RBP4.58□□□□□ -1.68
MCF2-202ENST00000370573 TSR2Q969E8 191 aaKnown RBP4.58□□□□□ -1.68
MCF2-202ENST00000370573 CHMP4AQ9BY43 222 aa4.58□□□□□ -1.68
MCF2-202ENST00000370573 PPP1R1BQ9UD71 204 aaPredicted RBP4.58□□□□□ -1.68
MCF2-202ENST00000370573 BCL9LQ86UU0 1499 aa4.58□□□□□ -1.68
MCF2-202ENST00000370573 NRAPQ86VF7 1730 aa4.58□□□□□ -1.68
MCF2-202ENST00000370573 MAP3K5Q99683 1374 aa4.58□□□□□ -1.68
MCF2-202ENST00000370573 RNF225M0QZC1 329 aaPredicted RBP4.58□□□□□ -1.68
MCF2-202ENST00000370573 CYP27B1O15528 508 aa4.58□□□□□ -1.68
MCF2-202ENST00000370573 ARAFP10398 606 aa4.58□□□□□ -1.68
MCF2-202ENST00000370573 EPXP11678 715 aa4.58□□□□□ -1.68
MCF2-202ENST00000370573 IL2RBP14784 551 aa4.58□□□□□ -1.68
MCF2-202ENST00000370573 ADH6P28332 368 aa4.58□□□□□ -1.68
MCF2-202ENST00000370573 AKAP4Q5JQC9 854 aa4.58□□□□□ -1.68
MCF2-202ENST00000370573 MPRIPQ6WCQ1 1025 aa4.58□□□□□ -1.68
MCF2-202ENST00000370573 CAPN12Q6ZSI9 719 aa4.58□□□□□ -1.68
MCF2-202ENST00000370573 PODNQ7Z5L7 613 aa4.58□□□□□ -1.68
MCF2-202ENST00000370573 UNC5CLQ8IV45 518 aa4.58□□□□□ -1.68
MCF2-202ENST00000370573 TMEM151AQ8N4L1 468 aa4.58□□□□□ -1.68
MCF2-202ENST00000370573 ANKIB1Q9P2G1 1089 aa4.58□□□□□ -1.68
MCF2-202ENST00000370573 SPATA31A1Q5TZJ5 1347 aa4.57□□□□□ -1.68
MCF2-202ENST00000370573 SPATA31A5Q5VU36 1347 aa4.57□□□□□ -1.68
MCF2-202ENST00000370573 SPATA31A7Q8IWB4 1347 aa4.57□□□□□ -1.68
MCF2-202ENST00000370573 FANCIQ9NVI1 1328 aa4.57□□□□□ -1.68
MCF2-202ENST00000370573 OVOS2A0A0G2JMS6 1433 aa4.57□□□□□ -1.68
MCF2-202ENST00000370573 H3BRB1 525 aa4.57□□□□□ -1.68
MCF2-202ENST00000370573 CHL1O00533 1208 aa4.57□□□□□ -1.68
MCF2-202ENST00000370573 RNMTO43148 476 aaKnown RBP4.57□□□□□ -1.68
MCF2-202ENST00000370573 PHKG2P15735 406 aa4.57□□□□□ -1.68
MCF2-202ENST00000370573 IGFBP4P22692 258 aa4.57□□□□□ -1.68
MCF2-202ENST00000370573 WEE1P30291 646 aa4.57□□□□□ -1.68
MCF2-202ENST00000370573 MTMR3Q13615 1198 aa4.57□□□□□ -1.68
MCF2-202ENST00000370573 NAALADL2Q58DX5 795 aa4.57□□□□□ -1.68
MCF2-202ENST00000370573 ZNF468Q5VIY5 522 aaPredicted RBP4.57□□□□□ -1.68
MCF2-202ENST00000370573 SLCO4C1Q6ZQN7 724 aa4.57□□□□□ -1.68
MCF2-202ENST00000370573 BTLAQ7Z6A9 289 aa4.57□□□□□ -1.68
MCF2-202ENST00000370573 ZCRB1Q8TBF4 217 aaKnown RBP4.57□□□□□ -1.68
MCF2-202ENST00000370573 VTI1AQ96AJ9 217 aa4.57□□□□□ -1.68
MCF2-202ENST00000370573 IGFLR1Q9H665 355 aa4.57□□□□□ -1.68
MCF2-202ENST00000370573 TUT1Q9H6E5 874 aaKnown RBP4.57□□□□□ -1.68
MCF2-202ENST00000370573 IFT57Q9NWB7 429 aa4.57□□□□□ -1.68
MCF2-202ENST00000370573 MIS18AQ9NYP9 233 aa4.57□□□□□ -1.68
MCF2-202ENST00000370573 SPG7Q9UQ90 795 aa4.57□□□□□ -1.68
MCF2-202ENST00000370573 BCS1LQ9Y276 419 aa4.57□□□□□ -1.68
MCF2-202ENST00000370573 LAS1LQ9Y4W2 734 aaKnown RBP4.57□□□□□ -1.68
MCF2-202ENST00000370573 SUPT16HQ9Y5B9 1047 aaKnown RBP4.57□□□□□ -1.68
MCF2-202ENST00000370573 DISP2A7MBM2 1401 aa4.57□□□□□ -1.68
MCF2-202ENST00000370573 NWD2Q9ULI1 1742 aa4.57□□□□□ -1.68
MCF2-202ENST00000370573 GNAI1P63096 354 aa4.57□□□□□ -1.68
MCF2-202ENST00000370573 EXOSC9Q06265 439 aaKnown RBP4.57□□□□□ -1.68
MCF2-202ENST00000370573 TYRO3Q06418 890 aa4.57□□□□□ -1.68
MCF2-202ENST00000370573 SPEM2Q0P670 501 aa4.57□□□□□ -1.68
MCF2-202ENST00000370573 TSNAXIP1Q2TAA8 658 aa4.57□□□□□ -1.68
MCF2-202ENST00000370573 FAM182BQ5T319 152 aa4.57□□□□□ -1.68
MCF2-202ENST00000370573 C9orf131Q5VYM1 1079 aa4.57□□□□□ -1.68
MCF2-202ENST00000370573 RTF1Q92541 710 aaKnown RBP4.57□□□□□ -1.68
MCF2-202ENST00000370573 BTBD6Q96KE9 485 aa4.57□□□□□ -1.68
MCF2-202ENST00000370573 MYH16Q9H6N6 1097 aa4.57□□□□□ -1.68
MCF2-202ENST00000370573 LRRC4BQ9NT99 713 aa4.57□□□□□ -1.68
MCF2-202ENST00000370573 CEMIPQ8WUJ3 1361 aa4.56□□□□□ -1.68
MCF2-202ENST00000370573 PKD1L3Q7Z443 1732 aa4.56□□□□□ -1.68
MCF2-202ENST00000370573 CALD1Q05682 793 aaKnown RBP4.56□□□□□ -1.68
MCF2-202ENST00000370573 FKBP5Q13451 457 aaPredicted RBP4.56□□□□□ -1.68
MCF2-202ENST00000370573 DGKZQ13574 1117 aa4.56□□□□□ -1.68
MCF2-202ENST00000370573 VPS72Q15906 364 aa4.56□□□□□ -1.68
MCF2-202ENST00000370573 SWI5Q1ZZU3 235 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms