RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 EYA2O00167 538 aa17.87■□□□□ 0.45
COL17A1-202ENST00000369733 WHAMMP3Q1A5X7 153 aa17.87■□□□□ 0.45
COL17A1-202ENST00000369733 NUTM2BA6NNL0 878 aaPredicted RBP17.87■□□□□ 0.45
COL17A1-202ENST00000369733 NUTM2EB1AL46 878 aaPredicted RBP17.87■□□□□ 0.45
COL17A1-202ENST00000369733 TRMT1LQ7Z2T5 733 aaKnown RBP17.87■□□□□ 0.45
COL17A1-202ENST00000369733 METTL22Q9BUU2 404 aaPredicted RBP17.87■□□□□ 0.45
COL17A1-202ENST00000369733 NUP58Q9BVL2 599 aa17.87■□□□□ 0.45
COL17A1-202ENST00000369733 NSFL1CQ9UNZ2 370 aaKnown RBP17.87■□□□□ 0.45
COL17A1-202ENST00000369733 PPP1R2P41236 205 aa17.86■□□□□ 0.45
COL17A1-202ENST00000369733 CSGALNACT2Q8N6G5 542 aa17.86■□□□□ 0.45
COL17A1-202ENST00000369733 APPBP2Q92624 585 aa17.86■□□□□ 0.45
COL17A1-202ENST00000369733 GDAP1L1Q96MZ0 367 aa17.86■□□□□ 0.45
COL17A1-202ENST00000369733 ABCC10Q5T3U5 1492 aa17.86■□□□□ 0.45
COL17A1-202ENST00000369733 MAGI3Q5TCQ9 1506 aa17.86■□□□□ 0.45
COL17A1-202ENST00000369733 NEBLO76041 1014 aa17.86■□□□□ 0.45
COL17A1-202ENST00000369733 RNASE9P60153 205 aaKnown RBP17.86■□□□□ 0.45
COL17A1-202ENST00000369733 GSTO1P78417 241 aa17.86■□□□□ 0.45
COL17A1-202ENST00000369733 PDE4DQ08499 809 aa17.86■□□□□ 0.45
COL17A1-202ENST00000369733 CCDC25Q86WR0 208 aa17.86■□□□□ 0.45
COL17A1-202ENST00000369733 HELBQ8NG08 1087 aaPredicted RBP17.86■□□□□ 0.45
COL17A1-202ENST00000369733 LSG1Q9H089 658 aaKnown RBP17.86■□□□□ 0.45
COL17A1-202ENST00000369733 PLXNC1O60486 1568 aa17.86■□□□□ 0.45
COL17A1-202ENST00000369733 VIMP08670 466 aaKnown RBP17.86■□□□□ 0.45
COL17A1-202ENST00000369733 LACTBP83111 547 aaPredicted RBP17.86■□□□□ 0.45
COL17A1-202ENST00000369733 A0A0D9SFI3 127 aa17.86■□□□□ 0.45
COL17A1-202ENST00000369733 PLCD1P51178 756 aa17.86■□□□□ 0.45
COL17A1-202ENST00000369733 GOLGA5Q8TBA6 731 aa17.86■□□□□ 0.45
COL17A1-202ENST00000369733 USP44Q9H0E7 712 aa17.86■□□□□ 0.45
COL17A1-202ENST00000369733 GPAA1O43292 621 aa17.85■□□□□ 0.45
COL17A1-202ENST00000369733 PPP4R3AQ6IN85 833 aa17.85■□□□□ 0.45
COL17A1-202ENST00000369733 NOX5Q96PH1 765 aa17.85■□□□□ 0.45
COL17A1-202ENST00000369733 TNRQ92752 1358 aa17.85■□□□□ 0.45
COL17A1-202ENST00000369733 MXRA7P84157 204 aa17.85■□□□□ 0.45
COL17A1-202ENST00000369733 CCDC174Q6PII3 467 aa17.85■□□□□ 0.45
COL17A1-202ENST00000369733 PPP1R14CQ8TAE6 165 aa17.85■□□□□ 0.45
COL17A1-202ENST00000369733 CACTINQ8WUQ7 758 aaKnown RBP17.85■□□□□ 0.45
COL17A1-202ENST00000369733 UHRF1BP1LA0JNW5 1464 aa17.85■□□□□ 0.45
COL17A1-202ENST00000369733 SWAP70Q9UH65 585 aa17.85■□□□□ 0.45
COL17A1-202ENST00000369733 SYNMO15061 1565 aa17.85■□□□□ 0.45
COL17A1-202ENST00000369733 OSBPL3Q9H4L5 887 aa17.85■□□□□ 0.45
COL17A1-202ENST00000369733 SETDB1Q15047 1291 aa17.85■□□□□ 0.45
COL17A1-202ENST00000369733 PIK3AP1Q6ZUJ8 805 aa17.85■□□□□ 0.45
COL17A1-202ENST00000369733 SV2BQ7L1I2 683 aa17.85■□□□□ 0.45
COL17A1-202ENST00000369733 RASEFQ8IZ41 740 aa17.85■□□□□ 0.45
COL17A1-202ENST00000369733 CCDC51Q96ER9 411 aa17.85■□□□□ 0.45
COL17A1-202ENST00000369733 DSCC1Q9BVC3 393 aa17.85■□□□□ 0.45
COL17A1-202ENST00000369733 PFKFB2O60825 505 aa17.84■□□□□ 0.45
COL17A1-202ENST00000369733 RAPGEF1Q13905 1077 aa17.84■□□□□ 0.45
COL17A1-202ENST00000369733 RGS22Q8NE09 1264 aa17.84■□□□□ 0.45
COL17A1-202ENST00000369733 RRP36Q96EU6 259 aaKnown RBP17.84■□□□□ 0.45
COL17A1-202ENST00000369733 MYL10Q9BUA6 226 aa17.84■□□□□ 0.45
COL17A1-202ENST00000369733 IQCGQ9H095 443 aaKnown RBP17.84■□□□□ 0.45
COL17A1-202ENST00000369733 SERTAD1Q9UHV2 236 aa17.84■□□□□ 0.45
COL17A1-202ENST00000369733 ZBTB16Q05516 673 aa17.84■□□□□ 0.45
COL17A1-202ENST00000369733 PCDHA7Q9UN72 937 aa17.84■□□□□ 0.45
COL17A1-202ENST00000369733 SBNO1A3KN83 1393 aa17.84■□□□□ 0.45
COL17A1-202ENST00000369733 ZCRB1Q8TBF4 217 aaKnown RBP17.84■□□□□ 0.45
COL17A1-202ENST00000369733 SAR1BQ9Y6B6 198 aa17.84■□□□□ 0.45
COL17A1-202ENST00000369733 CLNS1AP54105 237 aaKnown RBP17.84■□□□□ 0.45
COL17A1-202ENST00000369733 TTC38Q5R3I4 469 aa17.83■□□□□ 0.45
COL17A1-202ENST00000369733 NELFBQ8WX92 580 aa17.83■□□□□ 0.45
COL17A1-202ENST00000369733 EDC3Q96F86 508 aaKnown RBP17.83■□□□□ 0.45
COL17A1-202ENST00000369733 PSMB7Q99436 277 aa17.83■□□□□ 0.45
COL17A1-202ENST00000369733 STAP2Q9UGK3 403 aa17.83■□□□□ 0.45
COL17A1-202ENST00000369733 PAK2Q13177 524 aa17.83■□□□□ 0.45
COL17A1-202ENST00000369733 GSTA5Q7RTV2 222 aa17.83■□□□□ 0.45
COL17A1-202ENST00000369733 CCDC50Q8IVM0 306 aa17.83■□□□□ 0.45
COL17A1-202ENST00000369733 ZNF274Q96GC6 653 aaPredicted RBP17.83■□□□□ 0.45
COL17A1-202ENST00000369733 RPGRIP1Q96KN7 1286 aa17.83■□□□□ 0.45
COL17A1-202ENST00000369733 TRAF5O00463 557 aa17.83■□□□□ 0.44
COL17A1-202ENST00000369733 ATP5JP18859 108 aa17.83■□□□□ 0.44
COL17A1-202ENST00000369733 GNA11P29992 359 aa17.83■□□□□ 0.44
COL17A1-202ENST00000369733 ACTN2P35609 894 aa17.83■□□□□ 0.44
COL17A1-202ENST00000369733 RBM6P78332 1123 aaKnown RBP17.83■□□□□ 0.44
COL17A1-202ENST00000369733 KLHL34Q8N239 644 aa17.83■□□□□ 0.44
COL17A1-202ENST00000369733 LRRC45Q96CN5 670 aa17.83■□□□□ 0.44
COL17A1-202ENST00000369733 XAGE2Q96GT9 111 aa17.83■□□□□ 0.44
COL17A1-202ENST00000369733 SAMM50Q9Y512 469 aa17.83■□□□□ 0.44
COL17A1-202ENST00000369733 SAMD9Q5K651 1589 aa17.83■□□□□ 0.44
COL17A1-202ENST00000369733 SEC31AO94979 1220 aaKnown RBP17.83■□□□□ 0.44
COL17A1-202ENST00000369733 PPP1R7Q15435 360 aa17.83■□□□□ 0.44
COL17A1-202ENST00000369733 RPGRQ92834 1020 aaKnown RBP17.83■□□□□ 0.44
COL17A1-202ENST00000369733 CABS1Q96KC9 395 aa17.83■□□□□ 0.44
COL17A1-202ENST00000369733 TNNI2P48788 182 aa17.82■□□□□ 0.44
COL17A1-202ENST00000369733 NDUFA8P51970 172 aa17.82■□□□□ 0.44
COL17A1-202ENST00000369733 CALCOCO2Q13137 446 aa17.82■□□□□ 0.44
COL17A1-202ENST00000369733 ADCK5Q3MIX3 580 aa17.82■□□□□ 0.44
COL17A1-202ENST00000369733 KCNJ14Q9UNX9 436 aa17.82■□□□□ 0.44
COL17A1-202ENST00000369733 V9GY48 417 aaPredicted RBP17.82■□□□□ 0.44
COL17A1-202ENST00000369733 CNNM4Q6P4Q7 775 aa17.82■□□□□ 0.44
COL17A1-202ENST00000369733 UNC5CLQ8IV45 518 aa17.82■□□□□ 0.44
COL17A1-202ENST00000369733 RUFY4Q6ZNE9 571 aa17.82■□□□□ 0.44
COL17A1-202ENST00000369733 FERMT2Q96AC1 680 aa17.82■□□□□ 0.44
COL17A1-202ENST00000369733 IFT74Q96LB3 600 aa17.82■□□□□ 0.44
COL17A1-202ENST00000369733 FANCLQ9NW38 375 aa17.82■□□□□ 0.44
COL17A1-202ENST00000369733 TRPM2O94759 1503 aa17.82■□□□□ 0.44
COL17A1-202ENST00000369733 IRS4O14654 1257 aaPredicted RBP17.82■□□□□ 0.44
COL17A1-202ENST00000369733 BUB1BO60566 1050 aaPredicted RBP17.82■□□□□ 0.44
COL17A1-202ENST00000369733 CMA1P23946 247 aa17.82■□□□□ 0.44
COL17A1-202ENST00000369733 PDE11AQ9HCR9 933 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms