RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 METAP2P50579 478 aaKnown RBP eCLIP18.29■□□□□ 0.529e-6■■■■□ 23.9
SYNCRIP-202ENST00000369622 A0A1W2PQ27 194 aa18.29■□□□□ 0.52
SYNCRIP-202ENST00000369622 A0A1W2PQ64 194 aa18.29■□□□□ 0.52
SYNCRIP-202ENST00000369622 A0A1W2PQD8 194 aa18.29■□□□□ 0.52
SYNCRIP-202ENST00000369622 KIF23Q02241 960 aaPredicted RBP18.29■□□□□ 0.52
SYNCRIP-202ENST00000369622 CFAP100Q494V2 611 aa18.29■□□□□ 0.52
SYNCRIP-202ENST00000369622 ARMCX5Q6P1M9 558 aa18.29■□□□□ 0.52
SYNCRIP-202ENST00000369622 CC2D1AQ6P1N0 951 aaPredicted RBP18.29■□□□□ 0.52
SYNCRIP-202ENST00000369622 MB21D2Q8IYB1 491 aaPredicted RBP18.29■□□□□ 0.52
SYNCRIP-202ENST00000369622 NKX2-3Q8TAU0 364 aa18.29■□□□□ 0.52
SYNCRIP-202ENST00000369622 L2HGDHQ9H9P8 463 aa18.29■□□□□ 0.52
SYNCRIP-202ENST00000369622 SENP2Q9HC62 589 aa18.29■□□□□ 0.52
SYNCRIP-202ENST00000369622 UBE2Q2LH0YL09 131 aa18.28■□□□□ 0.52
SYNCRIP-202ENST00000369622 N4BP1O75113 896 aaKnown RBP18.28■□□□□ 0.52
SYNCRIP-202ENST00000369622 MAP2K2P36507 400 aa18.28■□□□□ 0.52
SYNCRIP-202ENST00000369622 PNOCQ13519 176 aa18.28■□□□□ 0.52
SYNCRIP-202ENST00000369622 CCDC91Q7Z6B0 441 aa18.28■□□□□ 0.52
SYNCRIP-202ENST00000369622 HELBQ8NG08 1087 aaPredicted RBP18.28■□□□□ 0.52
SYNCRIP-202ENST00000369622 POLR3EQ9NVU0 708 aa18.28■□□□□ 0.52
SYNCRIP-202ENST00000369622 YEATS4O95619 227 aa18.28■□□□□ 0.52
SYNCRIP-202ENST00000369622 MNAT1P51948 309 aa18.28■□□□□ 0.52
SYNCRIP-202ENST00000369622 ZFYP08048 801 aaPredicted RBP18.28■□□□□ 0.52
SYNCRIP-202ENST00000369622 NLRP12P59046 1061 aa18.28■□□□□ 0.52
SYNCRIP-202ENST00000369622 RRP12Q5JTH9 1297 aaKnown RBP18.28■□□□□ 0.52
SYNCRIP-202ENST00000369622 WWC2Q6AWC2 1192 aa18.28■□□□□ 0.52
SYNCRIP-202ENST00000369622 BRAPQ7Z569 592 aa18.28■□□□□ 0.52
SYNCRIP-202ENST00000369622 VPS37DQ86XT2 251 aa18.28■□□□□ 0.52
SYNCRIP-202ENST00000369622 A0A0G2JS52 829 aa18.27■□□□□ 0.52
SYNCRIP-202ENST00000369622 AFDNP55196 1824 aaKnown RBP18.27■□□□□ 0.52
SYNCRIP-202ENST00000369622 FANCCQ00597 558 aa18.27■□□□□ 0.52
SYNCRIP-202ENST00000369622 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.27■□□□□ 0.522e-6■■□□□ 12
SYNCRIP-202ENST00000369622 ANKRD20A12PQ8NF67 263 aa18.27■□□□□ 0.52
SYNCRIP-202ENST00000369622 CIAO1O76071 339 aa18.27■□□□□ 0.51
SYNCRIP-202ENST00000369622 ZNF526Q8TF50 670 aaPredicted RBP18.27■□□□□ 0.51
SYNCRIP-202ENST00000369622 PDE11AQ9HCR9 933 aa18.27■□□□□ 0.51
SYNCRIP-202ENST00000369622 MCAMP43121 646 aa18.26■□□□□ 0.51
SYNCRIP-202ENST00000369622 UBASH3AP57075 661 aa18.26■□□□□ 0.51
SYNCRIP-202ENST00000369622 TCIRG1Q13488 830 aa18.26■□□□□ 0.51
SYNCRIP-202ENST00000369622 TRIM29Q14134 588 aa18.26■□□□□ 0.51
SYNCRIP-202ENST00000369622 PPP2R5AQ15172 486 aa18.26■□□□□ 0.51
SYNCRIP-202ENST00000369622 CCDC93Q567U6 631 aa18.26■□□□□ 0.51
SYNCRIP-202ENST00000369622 KRT40Q6A162 431 aa18.26■□□□□ 0.51
SYNCRIP-202ENST00000369622 CYB5R4Q7L1T6 521 aa18.26■□□□□ 0.51
SYNCRIP-202ENST00000369622 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.26■□□□□ 0.516e-14■■■■■ 27.2
SYNCRIP-202ENST00000369622 BCCIPQ9P287 314 aaKnown RBP eCLIP18.26■□□□□ 0.51
SYNCRIP-202ENST00000369622 MROH7-TTC4A0A0A0MT08 1334 aa18.26■□□□□ 0.51
SYNCRIP-202ENST00000369622 DHX8Q14562 1220 aaKnown RBP18.26■□□□□ 0.51
SYNCRIP-202ENST00000369622 CPLX2Q6PUV4 134 aaKnown RBP18.26■□□□□ 0.51
SYNCRIP-202ENST00000369622 RABEP2Q9H5N1 569 aa18.26■□□□□ 0.51
SYNCRIP-202ENST00000369622 ECM2O94769 699 aaPredicted RBP18.25■□□□□ 0.51
SYNCRIP-202ENST00000369622 MCTP2Q6DN12 878 aa18.25■□□□□ 0.51
SYNCRIP-202ENST00000369622 TBC1D10CQ8IV04 446 aa18.25■□□□□ 0.51
SYNCRIP-202ENST00000369622 PDILTQ8N807 584 aa18.25■□□□□ 0.51
SYNCRIP-202ENST00000369622 ARFGAP3Q9NP61 516 aa18.25■□□□□ 0.51
SYNCRIP-202ENST00000369622 ANGEL1Q9UNK9 670 aaKnown RBP18.25■□□□□ 0.51
SYNCRIP-202ENST00000369622 KAT6BQ8WYB5 2073 aa18.25■□□□□ 0.51
SYNCRIP-202ENST00000369622 CMA1P23946 247 aa18.25■□□□□ 0.51
SYNCRIP-202ENST00000369622 CDC27P30260 824 aa18.25■□□□□ 0.51
SYNCRIP-202ENST00000369622 KIF6Q6ZMV9 814 aa18.25■□□□□ 0.51
SYNCRIP-202ENST00000369622 EXOC4Q96A65 974 aa18.25■□□□□ 0.51
SYNCRIP-202ENST00000369622 DONSONQ9NYP3 566 aa18.25■□□□□ 0.51
SYNCRIP-202ENST00000369622 DPF2Q92785 391 aa18.25■□□□□ 0.51
SYNCRIP-202ENST00000369622 SRRTQ9BXP5 876 aaKnown RBP18.25■□□□□ 0.51
SYNCRIP-202ENST00000369622 SLC26A6Q9BXS9 759 aa18.25■□□□□ 0.51
SYNCRIP-202ENST00000369622 GREM2Q9H772 168 aa18.25■□□□□ 0.51
SYNCRIP-202ENST00000369622 SUGCTQ9HAC7 445 aa18.25■□□□□ 0.51
SYNCRIP-202ENST00000369622 ITGA6P23229 1130 aa18.24■□□□□ 0.51
SYNCRIP-202ENST00000369622 DNAJC10Q8IXB1 793 aa18.24■□□□□ 0.51
SYNCRIP-202ENST00000369622 PPM1EQ8WY54 764 aa18.24■□□□□ 0.51
SYNCRIP-202ENST00000369622 ZKSCAN3Q9BRR0 538 aa18.24■□□□□ 0.51
SYNCRIP-202ENST00000369622 UTP14AQ9BVJ6 771 aaKnown RBP18.24■□□□□ 0.51
SYNCRIP-202ENST00000369622 SIPA1L3O60292 1781 aaPredicted RBP18.24■□□□□ 0.51
SYNCRIP-202ENST00000369622 SNAP23O00161 211 aa18.24■□□□□ 0.51
SYNCRIP-202ENST00000369622 FANCGO15287 622 aa18.24■□□□□ 0.51
SYNCRIP-202ENST00000369622 TADA3O75528 432 aa18.24■□□□□ 0.51
SYNCRIP-202ENST00000369622 IARSP41252 1262 aaKnown RBP18.24■□□□□ 0.51
SYNCRIP-202ENST00000369622 EVA1CP58658 441 aa18.24■□□□□ 0.51
SYNCRIP-202ENST00000369622 SLC39A14Q15043 492 aa18.24■□□□□ 0.51
SYNCRIP-202ENST00000369622 CCDC150Q8NCX0 1101 aa18.24■□□□□ 0.51
SYNCRIP-202ENST00000369622 OSBPL5Q9H0X9 879 aaPredicted RBP18.24■□□□□ 0.51
SYNCRIP-202ENST00000369622 IMPACTQ9P2X3 320 aa18.24■□□□□ 0.51
SYNCRIP-202ENST00000369622 FAN1Q9Y2M0 1017 aa18.24■□□□□ 0.51
SYNCRIP-202ENST00000369622 PCDH11XQ9BZA7 1347 aa18.24■□□□□ 0.51
SYNCRIP-202ENST00000369622 PCDH11YQ9BZA8 1340 aa18.24■□□□□ 0.51
SYNCRIP-202ENST00000369622 CMTR1Q8N1G2 835 aaKnown RBP18.23■□□□□ 0.51
SYNCRIP-202ENST00000369622 CNNM3Q8NE01 707 aa18.23■□□□□ 0.51
SYNCRIP-202ENST00000369622 GOLGA8AA7E2F4 631 aa18.23■□□□□ 0.51
SYNCRIP-202ENST00000369622 LIG3P49916 1009 aa18.23■□□□□ 0.51
SYNCRIP-202ENST00000369622 NCAPHQ15003 741 aa18.23■□□□□ 0.51
SYNCRIP-202ENST00000369622 TMEM67Q5HYA8 995 aa18.23■□□□□ 0.51
SYNCRIP-202ENST00000369622 SHC4Q6S5L8 630 aa18.23■□□□□ 0.51
SYNCRIP-202ENST00000369622 FAM43BQ6ZT52 329 aaPredicted RBP18.23■□□□□ 0.51
SYNCRIP-202ENST00000369622 AIDAQ96BJ3 306 aa18.23■□□□□ 0.51
SYNCRIP-202ENST00000369622 UBXN6Q9BZV1 441 aa18.23■□□□□ 0.51
SYNCRIP-202ENST00000369622 ZNF532Q9HCE3 1301 aa18.23■□□□□ 0.51
SYNCRIP-202ENST00000369622 ZBTB43O43298 467 aa18.23■□□□□ 0.51
SYNCRIP-202ENST00000369622 SCP2P22307 547 aa18.23■□□□□ 0.51
SYNCRIP-202ENST00000369622 ATP6V1AP38606 617 aa18.23■□□□□ 0.51
SYNCRIP-202ENST00000369622 CTDSPL2Q05D32 466 aa18.23■□□□□ 0.51
SYNCRIP-202ENST00000369622 OLFM4Q6UX06 510 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 164.9 ms