RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 LMBR1Q8WVP7 490 aa11.65□□□□□ -0.54
PRDM1-201ENST00000369089 CENPKQ9BS16 269 aa11.65□□□□□ -0.54
PRDM1-201ENST00000369089 EMILIN1Q9Y6C2 1016 aa11.65□□□□□ -0.54
PRDM1-201ENST00000369089 INSRP06213 1382 aa11.65□□□□□ -0.54
PRDM1-201ENST00000369089 PZPP20742 1482 aa11.65□□□□□ -0.54
PRDM1-201ENST00000369089 RAB11FIP3O75154 756 aa11.65□□□□□ -0.54
PRDM1-201ENST00000369089 ALDH1L2Q3SY69 923 aa11.65□□□□□ -0.54
PRDM1-201ENST00000369089 ZNF530Q6P9A1 599 aaPredicted RBP11.65□□□□□ -0.54
PRDM1-201ENST00000369089 SPATA21Q7Z572 469 aa11.65□□□□□ -0.54
PRDM1-201ENST00000369089 IFT20Q8IY31 132 aa11.65□□□□□ -0.54
PRDM1-201ENST00000369089 P3H4Q92791 437 aa11.65□□□□□ -0.54
PRDM1-201ENST00000369089 UBA5Q9GZZ9 404 aa11.65□□□□□ -0.54
PRDM1-201ENST00000369089 PBRM1Q86U86 1689 aa11.65□□□□□ -0.55
PRDM1-201ENST00000369089 E2F6O75461 281 aa11.65□□□□□ -0.55
PRDM1-201ENST00000369089 MYL5Q02045 173 aa11.65□□□□□ -0.55
PRDM1-201ENST00000369089 RAB3IL1Q8TBN0 382 aa11.65□□□□□ -0.55
PRDM1-201ENST00000369089 ZNF653Q96CK0 615 aa11.65□□□□□ -0.55
PRDM1-201ENST00000369089 CTAGE1Q96RT6 745 aa11.65□□□□□ -0.55
PRDM1-201ENST00000369089 ZNF446Q9NWS9 450 aa11.65□□□□□ -0.55
PRDM1-201ENST00000369089 VSIG1Q86XK7 387 aa11.64□□□□□ -0.55
PRDM1-201ENST00000369089 AMOTL1Q8IY63 956 aa11.64□□□□□ -0.55
PRDM1-201ENST00000369089 SMC1BQ8NDV3 1235 aa11.64□□□□□ -0.55
PRDM1-201ENST00000369089 TEKT4Q8WW24 435 aa11.64□□□□□ -0.55
PRDM1-201ENST00000369089 LZICQ8WZA0 190 aa11.64□□□□□ -0.55
PRDM1-201ENST00000369089 CTTNBP2NLQ9P2B4 639 aa11.64□□□□□ -0.55
PRDM1-201ENST00000369089 PARD3Q8TEW0 1356 aa11.64□□□□□ -0.55
PRDM1-201ENST00000369089 OPHN1O60890 802 aa11.64□□□□□ -0.55
PRDM1-201ENST00000369089 VCAM1P19320 739 aa11.64□□□□□ -0.55
PRDM1-201ENST00000369089 ALDH3A1P30838 453 aa11.64□□□□□ -0.55
PRDM1-201ENST00000369089 SMTNP53814 917 aa11.64□□□□□ -0.55
PRDM1-201ENST00000369089 KCNB1Q14721 858 aa11.64□□□□□ -0.55
PRDM1-201ENST00000369089 PLCB4Q15147 1175 aa11.64□□□□□ -0.55
PRDM1-201ENST00000369089 ZNF483Q8TF39 744 aaPredicted RBP11.64□□□□□ -0.55
PRDM1-201ENST00000369089 ANKRD62A6NC57 917 aa11.64□□□□□ -0.55
PRDM1-201ENST00000369089 AHCYL1O43865 530 aa11.64□□□□□ -0.55
PRDM1-201ENST00000369089 TBC1D8O95759 1140 aa11.64□□□□□ -0.55
PRDM1-201ENST00000369089 CPP00450 1065 aa11.64□□□□□ -0.55
PRDM1-201ENST00000369089 PAK2Q13177 524 aa11.64□□□□□ -0.55
PRDM1-201ENST00000369089 PARD3BQ8TEW8 1205 aa11.64□□□□□ -0.55
PRDM1-201ENST00000369089 ESYT1Q9BSJ8 1104 aa11.64□□□□□ -0.55
PRDM1-201ENST00000369089 MIS12Q9H081 205 aa11.64□□□□□ -0.55
PRDM1-201ENST00000369089 RHBDL2Q9NX52 303 aa11.64□□□□□ -0.55
PRDM1-201ENST00000369089 SURF6O75683 361 aaKnown RBP11.63□□□□□ -0.55
PRDM1-201ENST00000369089 TMCC1O94876 653 aa11.63□□□□□ -0.55
PRDM1-201ENST00000369089 CTCFP49711 727 aaPredicted RBP11.63□□□□□ -0.55
PRDM1-201ENST00000369089 CUL4BQ13620 913 aa11.63□□□□□ -0.55
PRDM1-201ENST00000369089 CNGA4Q8IV77 575 aa11.63□□□□□ -0.55
PRDM1-201ENST00000369089 WDR75Q8IWA0 830 aaKnown RBP11.63□□□□□ -0.55
PRDM1-201ENST00000369089 MAP7D3Q8IWC1 876 aa11.63□□□□□ -0.55
PRDM1-201ENST00000369089 KIRREL3Q8IZU9 778 aa11.63□□□□□ -0.55
PRDM1-201ENST00000369089 DNMT1P26358 1616 aaKnown RBP11.63□□□□□ -0.55
PRDM1-201ENST00000369089 ABCC2Q92887 1545 aa11.63□□□□□ -0.55
PRDM1-201ENST00000369089 USP27XA6NNY8 438 aa11.63□□□□□ -0.55
PRDM1-201ENST00000369089 SPTY2D1Q68D10 685 aaPredicted RBP11.63□□□□□ -0.55
PRDM1-201ENST00000369089 PRPF40BQ6NWY9 871 aaKnown RBP11.63□□□□□ -0.55
PRDM1-201ENST00000369089 C8orf74Q6P047 294 aa11.63□□□□□ -0.55
PRDM1-201ENST00000369089 SLC40A1Q9NP59 571 aa11.63□□□□□ -0.55
PRDM1-201ENST00000369089 CEP131Q9UPN4 1083 aa11.63□□□□□ -0.55
PRDM1-201ENST00000369089 TSC22D4Q9Y3Q8 395 aa11.63□□□□□ -0.55
PRDM1-201ENST00000369089 GNAI2P04899 355 aa11.63□□□□□ -0.55
PRDM1-201ENST00000369089 CCDC110Q8TBZ0 833 aa11.63□□□□□ -0.55
PRDM1-201ENST00000369089 NSMCE1Q8WV22 266 aa11.63□□□□□ -0.55
PRDM1-201ENST00000369089 LRRC45Q96CN5 670 aa11.63□□□□□ -0.55
PRDM1-201ENST00000369089 TRAIPQ9BWF2 469 aa11.63□□□□□ -0.55
PRDM1-201ENST00000369089 DNA2P51530 1060 aa11.63□□□□□ -0.55
PRDM1-201ENST00000369089 ZNF131P52739 623 aa11.63□□□□□ -0.55
PRDM1-201ENST00000369089 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.63□□□□□ -0.55
PRDM1-201ENST00000369089 DHX58Q96C10 678 aa11.63□□□□□ -0.55
PRDM1-201ENST00000369089 RASSF2P50749 326 aa11.62□□□□□ -0.55
PRDM1-201ENST00000369089 MRPS35P82673 323 aaKnown RBP11.62□□□□□ -0.55
PRDM1-201ENST00000369089 IFI16Q16666 785 aaKnown RBP11.62□□□□□ -0.55
PRDM1-201ENST00000369089 NANOGNBQ7Z5D8 188 aa11.62□□□□□ -0.55
PRDM1-201ENST00000369089 C3orf20Q8ND61 904 aa11.62□□□□□ -0.55
PRDM1-201ENST00000369089 ZKSCAN4Q969J2 545 aaPredicted RBP11.62□□□□□ -0.55
PRDM1-201ENST00000369089 TRIM11Q96F44 468 aa11.62□□□□□ -0.55
PRDM1-201ENST00000369089 TEX13AQ9BXU3 409 aaPredicted RBP11.62□□□□□ -0.55
PRDM1-201ENST00000369089 ABCC10Q5T3U5 1492 aa11.62□□□□□ -0.55
PRDM1-201ENST00000369089 TARBP1Q13395 1621 aaKnown RBP11.62□□□□□ -0.55
PRDM1-201ENST00000369089 TATP17735 454 aaPredicted RBP11.62□□□□□ -0.55
PRDM1-201ENST00000369089 PAX3P23760 479 aa11.62□□□□□ -0.55
PRDM1-201ENST00000369089 CCNHP51946 323 aaPredicted RBP11.62□□□□□ -0.55
PRDM1-201ENST00000369089 PDCLQ13371 301 aa11.62□□□□□ -0.55
PRDM1-201ENST00000369089 KLHL29Q96CT2 875 aa11.62□□□□□ -0.55
PRDM1-201ENST00000369089 TSGA10Q9BZW7 698 aa11.62□□□□□ -0.55
PRDM1-201ENST00000369089 MMADHCQ9H3L0 296 aaPredicted RBP11.62□□□□□ -0.55
PRDM1-201ENST00000369089 RTL1A6NKG5 1358 aa11.62□□□□□ -0.55
PRDM1-201ENST00000369089 EXOC5O00471 708 aa11.62□□□□□ -0.55
PRDM1-201ENST00000369089 RNF8O76064 485 aa11.62□□□□□ -0.55
PRDM1-201ENST00000369089 MTA1Q13330 715 aa11.62□□□□□ -0.55
PRDM1-201ENST00000369089 JAKMIP2Q96AA8 810 aa11.62□□□□□ -0.55
PRDM1-201ENST00000369089 MIS18AQ9NYP9 233 aa11.62□□□□□ -0.55
PRDM1-201ENST00000369089 THEGQ9P2T0 379 aa11.62□□□□□ -0.55
PRDM1-201ENST00000369089 PPP1R9AQ9ULJ8 1098 aa11.62□□□□□ -0.55
PRDM1-201ENST00000369089 NOL3O60936 208 aaKnown RBP11.62□□□□□ -0.55
PRDM1-201ENST00000369089 KIF5AQ12840 1032 aa11.62□□□□□ -0.55
PRDM1-201ENST00000369089 TBC1D1Q86TI0 1168 aaPredicted RBP11.62□□□□□ -0.55
PRDM1-201ENST00000369089 LCA5Q86VQ0 697 aa11.62□□□□□ -0.55
PRDM1-201ENST00000369089 CFAP57Q96MR6 1250 aa11.62□□□□□ -0.55
PRDM1-201ENST00000369089 FSD1Q9BTV5 496 aa11.62□□□□□ -0.55
PRDM1-201ENST00000369089 TRPC6Q9Y210 931 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms