RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 RIOK1Q9BRS2 568 aaKnown RBP18.26■□□□□ 0.51
SMPDL3A-201ENST00000368440 DDX60LQ5H9U9 1706 aaKnown RBP18.25■□□□□ 0.51
SMPDL3A-201ENST00000368440 DDTLA6NHG4 134 aaPredicted RBP18.25■□□□□ 0.51
SMPDL3A-201ENST00000368440 USP2O75604 605 aaPredicted RBP18.25■□□□□ 0.51
SMPDL3A-201ENST00000368440 HHIPL1Q96JK4 782 aa18.25■□□□□ 0.51
SMPDL3A-201ENST00000368440 CAPNS2Q96L46 248 aa18.25■□□□□ 0.51
SMPDL3A-201ENST00000368440 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.25■□□□□ 0.51
SMPDL3A-201ENST00000368440 NAV1Q8NEY1 1877 aa18.25■□□□□ 0.51
SMPDL3A-201ENST00000368440 MYH1P12882 1939 aa18.25■□□□□ 0.51
SMPDL3A-201ENST00000368440 SLURP2P0DP57 97 aa18.24■□□□□ 0.51
SMPDL3A-201ENST00000368440 PLCG2P16885 1265 aa18.24■□□□□ 0.51
SMPDL3A-201ENST00000368440 ERICH6BQ5W0A0 696 aa18.24■□□□□ 0.51
SMPDL3A-201ENST00000368440 TMED8Q6PL24 325 aaPredicted RBP18.24■□□□□ 0.51
SMPDL3A-201ENST00000368440 ARMC9Q7Z3E5 817 aa18.24■□□□□ 0.51
SMPDL3A-201ENST00000368440 TGFBRAP1Q8WUH2 860 aa18.24■□□□□ 0.51
SMPDL3A-201ENST00000368440 PPP4R2Q9NY27 417 aa18.24■□□□□ 0.51
SMPDL3A-201ENST00000368440 ATRNL1Q5VV63 1379 aa18.24■□□□□ 0.51
SMPDL3A-201ENST00000368440 PPP1R12BO60237 982 aaPredicted RBP18.24■□□□□ 0.51
SMPDL3A-201ENST00000368440 MAP3K11Q16584 847 aa18.24■□□□□ 0.51
SMPDL3A-201ENST00000368440 RGMBQ6NW40 437 aa18.24■□□□□ 0.51
SMPDL3A-201ENST00000368440 MAPKAPK5Q8IW41 473 aa18.24■□□□□ 0.51
SMPDL3A-201ENST00000368440 OSBPL5Q9H0X9 879 aaPredicted RBP18.24■□□□□ 0.51
SMPDL3A-201ENST00000368440 FLT1P17948 1338 aa18.24■□□□□ 0.51
SMPDL3A-201ENST00000368440 WDR33Q9C0J8 1336 aaKnown RBP18.24■□□□□ 0.51
SMPDL3A-201ENST00000368440 MAGEB6P1A0A0J9YX57 407 aa18.23■□□□□ 0.51
SMPDL3A-201ENST00000368440 NPM3O75607 178 aaKnown RBP18.23■□□□□ 0.51
SMPDL3A-201ENST00000368440 LDLRAD1Q5T700 205 aa18.23■□□□□ 0.51
SMPDL3A-201ENST00000368440 MIGA2Q7L4E1 593 aa18.23■□□□□ 0.51
SMPDL3A-201ENST00000368440 LCORLQ8N3X6 602 aa18.23■□□□□ 0.51
SMPDL3A-201ENST00000368440 COL2A1P02458 1487 aaPredicted RBP18.23■□□□□ 0.51
SMPDL3A-201ENST00000368440 UBE3CQ15386 1083 aa18.22■□□□□ 0.51
SMPDL3A-201ENST00000368440 ZSCAN29Q8IWY8 852 aaPredicted RBP18.22■□□□□ 0.51
SMPDL3A-201ENST00000368440 CLMNQ96JQ2 1002 aa18.22■□□□□ 0.51
SMPDL3A-201ENST00000368440 CSRNP1Q96S65 589 aa18.22■□□□□ 0.51
SMPDL3A-201ENST00000368440 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.22■□□□□ 0.51
SMPDL3A-201ENST00000368440 FAM155AB1AL88 458 aaPredicted RBP18.22■□□□□ 0.51
SMPDL3A-201ENST00000368440 AOC2O75106 756 aa18.22■□□□□ 0.51
SMPDL3A-201ENST00000368440 ZNF157P51786 506 aaPredicted RBP18.22■□□□□ 0.51
SMPDL3A-201ENST00000368440 PUS7LQ9H0K6 701 aaKnown RBP18.22■□□□□ 0.51
SMPDL3A-201ENST00000368440 OSBPL3Q9H4L5 887 aa18.22■□□□□ 0.51
SMPDL3A-201ENST00000368440 ARMT1Q9H993 441 aa18.22■□□□□ 0.51
SMPDL3A-201ENST00000368440 PCNTO95613 3336 aa18.21■□□□□ 0.51
SMPDL3A-201ENST00000368440 MBD4O95243 580 aa18.21■□□□□ 0.51
SMPDL3A-201ENST00000368440 IREB2P48200 963 aaKnown RBP18.21■□□□□ 0.51
SMPDL3A-201ENST00000368440 ZSCAN25Q6NSZ9 544 aa18.21■□□□□ 0.51
SMPDL3A-201ENST00000368440 RASAL3Q86YV0 1011 aa18.21■□□□□ 0.51
SMPDL3A-201ENST00000368440 ZIC5Q96T25 663 aa18.21■□□□□ 0.51
SMPDL3A-201ENST00000368440 FSD1Q9BTV5 496 aa18.21■□□□□ 0.51
SMPDL3A-201ENST00000368440 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.2■□□□□ 0.5
SMPDL3A-201ENST00000368440 SAP30BPQ9UHR5 308 aaKnown RBP18.2■□□□□ 0.5
SMPDL3A-201ENST00000368440 RNF113AO15541 343 aaKnown RBP18.2■□□□□ 0.5
SMPDL3A-201ENST00000368440 SLC10A3P09131 477 aa18.2■□□□□ 0.5
SMPDL3A-201ENST00000368440 ECE1P42892 770 aa18.2■□□□□ 0.5
SMPDL3A-201ENST00000368440 USP5P45974 858 aa18.2■□□□□ 0.5
SMPDL3A-201ENST00000368440 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.2■□□□□ 0.5
SMPDL3A-201ENST00000368440 CERS3Q8IU89 383 aa18.2■□□□□ 0.5
SMPDL3A-201ENST00000368440 JMYQ8N9B5 988 aa18.2■□□□□ 0.5
SMPDL3A-201ENST00000368440 OSBP2Q969R2 916 aa18.2■□□□□ 0.5
SMPDL3A-201ENST00000368440 BAZ2AQ9UIF9 1905 aaKnown RBP18.2■□□□□ 0.5
SMPDL3A-201ENST00000368440 FAM196BA6NMK8 535 aa18.19■□□□□ 0.5
SMPDL3A-201ENST00000368440 PRKAB2O43741 272 aa18.19■□□□□ 0.5
SMPDL3A-201ENST00000368440 SLC4A8Q2Y0W8 1093 aa18.19■□□□□ 0.5
SMPDL3A-201ENST00000368440 DCAF15Q66K64 600 aa18.19■□□□□ 0.5
SMPDL3A-201ENST00000368440 SDR42E1Q8WUS8 393 aa18.19■□□□□ 0.5
SMPDL3A-201ENST00000368440 HOOK2Q96ED9 719 aa18.19■□□□□ 0.5
SMPDL3A-201ENST00000368440 WRNIP1Q96S55 665 aa18.19■□□□□ 0.5
SMPDL3A-201ENST00000368440 CENPQQ7L2Z9 268 aaPredicted RBP18.18■□□□□ 0.5
SMPDL3A-201ENST00000368440 SKAP1Q86WV1 359 aa18.18■□□□□ 0.5
SMPDL3A-201ENST00000368440 ANKRD13AQ8IZ07 590 aa18.18■□□□□ 0.5
SMPDL3A-201ENST00000368440 APPBP2Q92624 585 aa18.18■□□□□ 0.5
SMPDL3A-201ENST00000368440 EVI5LQ96CN4 794 aa18.18■□□□□ 0.5
SMPDL3A-201ENST00000368440 SEC62Q99442 399 aaKnown RBP18.18■□□□□ 0.5
SMPDL3A-201ENST00000368440 ZNF341Q9BYN7 854 aa18.18■□□□□ 0.5
SMPDL3A-201ENST00000368440 PALD1Q9ULE6 856 aa18.18■□□□□ 0.5
SMPDL3A-201ENST00000368440 LAMB1P07942 1786 aa18.18■□□□□ 0.5
SMPDL3A-201ENST00000368440 M0R2C6 588 aa18.18■□□□□ 0.5
SMPDL3A-201ENST00000368440 INPP5BP32019 993 aa18.18■□□□□ 0.5
SMPDL3A-201ENST00000368440 VGLL4Q14135 290 aa18.18■□□□□ 0.5
SMPDL3A-201ENST00000368440 ZKSCAN4Q969J2 545 aaPredicted RBP18.18■□□□□ 0.5
SMPDL3A-201ENST00000368440 CCDC136Q96JN2 1154 aa18.18■□□□□ 0.5
SMPDL3A-201ENST00000368440 CRNKL1Q9BZJ0 848 aaKnown RBP18.18■□□□□ 0.5
SMPDL3A-201ENST00000368440 ATAD5Q96QE3 1844 aa18.18■□□□□ 0.5
SMPDL3A-201ENST00000368440 TRIM6-TRIM34B2RNG4 842 aa18.17■□□□□ 0.5
SMPDL3A-201ENST00000368440 ZFYP08048 801 aaPredicted RBP18.17■□□□□ 0.5
SMPDL3A-201ENST00000368440 MAP3K9P80192 1104 aa18.17■□□□□ 0.5
SMPDL3A-201ENST00000368440 MKRN3Q13064 507 aaKnown RBP18.17■□□□□ 0.5
SMPDL3A-201ENST00000368440 CCDC102AQ96A19 550 aa18.17■□□□□ 0.5
SMPDL3A-201ENST00000368440 AIDAQ96BJ3 306 aa18.17■□□□□ 0.5
SMPDL3A-201ENST00000368440 ELP3Q9H9T3 547 aa18.17■□□□□ 0.5
SMPDL3A-201ENST00000368440 DOCK1Q14185 1865 aa18.17■□□□□ 0.5
SMPDL3A-201ENST00000368440 MAP3K10Q02779 954 aa18.16■□□□□ 0.5
SMPDL3A-201ENST00000368440 EVX2Q03828 476 aa18.16■□□□□ 0.5
SMPDL3A-201ENST00000368440 CNKSR2Q8WXI2 1034 aa18.16■□□□□ 0.5
SMPDL3A-201ENST00000368440 RILPL2Q969X0 211 aa18.16■□□□□ 0.5
SMPDL3A-201ENST00000368440 ZNF112Q9UJU3 913 aa18.16■□□□□ 0.5
SMPDL3A-201ENST00000368440 SNCAIPQ9Y6H5 919 aa18.16■□□□□ 0.5
SMPDL3A-201ENST00000368440 PHF20L1A8MW92 1017 aa18.16■□□□□ 0.5
SMPDL3A-201ENST00000368440 GJA5P36382 358 aa18.16■□□□□ 0.5
SMPDL3A-201ENST00000368440 SLC10A4Q96EP9 437 aa18.16■□□□□ 0.5
SMPDL3A-201ENST00000368440 DHX36Q9H2U1 1008 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms