RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 SCAND2PQ9GZW5 306 aaPredicted RBP13.54□□□□□ -0.24
USF1-201ENST00000368019 GREM2Q9H772 168 aa13.54□□□□□ -0.24
USF1-201ENST00000368019 BSDC1Q9NW68 430 aaPredicted RBP13.54□□□□□ -0.24
USF1-201ENST00000368019 SAGE1Q9NXZ1 904 aa13.54□□□□□ -0.24
USF1-201ENST00000368019 HMG20BQ9P0W2 317 aa13.54□□□□□ -0.24
USF1-201ENST00000368019 PITPNM2Q9BZ72 1349 aa13.54□□□□□ -0.24
USF1-201ENST00000368019 MED23Q9ULK4 1368 aa13.54□□□□□ -0.24
USF1-201ENST00000368019 NEURL1BA8MQ27 555 aa13.53□□□□□ -0.24
USF1-201ENST00000368019 FIBPO43427 364 aa13.53□□□□□ -0.24
USF1-201ENST00000368019 USP17L8P0C7I0 530 aa13.53□□□□□ -0.24
USF1-201ENST00000368019 CASTP20810 708 aaKnown RBP13.53□□□□□ -0.24
USF1-201ENST00000368019 CDC25BP30305 580 aa13.53□□□□□ -0.24
USF1-201ENST00000368019 MAP3K11Q16584 847 aa13.53□□□□□ -0.24
USF1-201ENST00000368019 TICAM2Q86XR7 235 aa13.53□□□□□ -0.24
USF1-201ENST00000368019 ANKRD7Q92527 254 aa13.53□□□□□ -0.24
USF1-201ENST00000368019 CSRNP1Q96S65 589 aa13.53□□□□□ -0.24
USF1-201ENST00000368019 NUP62CLQ9H1M0 184 aa13.53□□□□□ -0.24
USF1-201ENST00000368019 MYOZ2Q9NPC6 264 aa13.53□□□□□ -0.24
USF1-201ENST00000368019 UTYO14607 1347 aa13.53□□□□□ -0.24
USF1-201ENST00000368019 CASP7P55210 303 aa13.52□□□□□ -0.25
USF1-201ENST00000368019 MLLT1Q03111 559 aaPredicted RBP13.52□□□□□ -0.25
USF1-201ENST00000368019 DGKZQ13574 1117 aa13.52□□□□□ -0.25
USF1-201ENST00000368019 CWF19L2Q2TBE0 894 aaKnown RBP13.52□□□□□ -0.25
USF1-201ENST00000368019 DACT2Q5SW24 774 aa13.52□□□□□ -0.25
USF1-201ENST00000368019 RNF20Q5VTR2 975 aa13.52□□□□□ -0.25
USF1-201ENST00000368019 MAP4K1Q92918 833 aa13.52□□□□□ -0.25
USF1-201ENST00000368019 PLA2G12BQ9BX93 195 aa13.52□□□□□ -0.25
USF1-201ENST00000368019 RNF186Q9NXI6 227 aa13.52□□□□□ -0.25
USF1-201ENST00000368019 FKBP1BP68106 108 aa13.51□□□□□ -0.25
USF1-201ENST00000368019 DMTNQ08495 405 aa13.51□□□□□ -0.25
USF1-201ENST00000368019 NEXNQ0ZGT2 675 aa13.51□□□□□ -0.25
USF1-201ENST00000368019 TXNRD3Q86VQ6 643 aa13.51□□□□□ -0.25
USF1-201ENST00000368019 ZNF710Q8N1W2 664 aa13.51□□□□□ -0.25
USF1-201ENST00000368019 TDRD7Q8NHU6 1098 aaKnown RBP13.51□□□□□ -0.25
USF1-201ENST00000368019 JAKMIP1Q96N16 626 aaKnown RBP13.51□□□□□ -0.25
USF1-201ENST00000368019 TTC12Q9H892 705 aaPredicted RBP13.51□□□□□ -0.25
USF1-201ENST00000368019 PDE4DIPQ5VU43 2346 aa13.51□□□□□ -0.25
USF1-201ENST00000368019 A0A1B0GUL6 1792 aa13.5□□□□□ -0.25
USF1-201ENST00000368019 NEMFO60524 1076 aa13.5□□□□□ -0.25
USF1-201ENST00000368019 TRPA1O75762 1119 aa13.5□□□□□ -0.25
USF1-201ENST00000368019 CSF1RP07333 972 aa13.5□□□□□ -0.25
USF1-201ENST00000368019 DNM1Q05193 864 aaKnown RBP13.5□□□□□ -0.25
USF1-201ENST00000368019 ST3GAL1Q11201 340 aa13.5□□□□□ -0.25
USF1-201ENST00000368019 NBPF9Q3BBW0 867 aa13.5□□□□□ -0.25
USF1-201ENST00000368019 STRIP1Q5VSL9 837 aa13.5□□□□□ -0.25
USF1-201ENST00000368019 GIMAP6Q6P9H5 292 aa13.5□□□□□ -0.25
USF1-201ENST00000368019 CWC27Q6UX04 472 aaKnown RBP13.5□□□□□ -0.25
USF1-201ENST00000368019 UBE3BQ7Z3V4 1068 aa13.5□□□□□ -0.25
USF1-201ENST00000368019 RASAL3Q86YV0 1011 aa13.5□□□□□ -0.25
USF1-201ENST00000368019 CCDC83Q8IWF9 413 aa13.5□□□□□ -0.25
USF1-201ENST00000368019 REM2Q8IYK8 340 aaPredicted RBP13.5□□□□□ -0.25
USF1-201ENST00000368019 PDCL2Q8N4E4 241 aa13.5□□□□□ -0.25
USF1-201ENST00000368019 FEZ1Q99689 392 aa13.5□□□□□ -0.25
USF1-201ENST00000368019 MXD3Q9BW11 206 aa13.5□□□□□ -0.25
USF1-201ENST00000368019 LARGE1O95461 756 aa13.49□□□□□ -0.25
USF1-201ENST00000368019 TYRO3Q06418 890 aa13.49□□□□□ -0.25
USF1-201ENST00000368019 GCKRQ14397 625 aa13.49□□□□□ -0.25
USF1-201ENST00000368019 KRT32Q14532 448 aa13.49□□□□□ -0.25
USF1-201ENST00000368019 ME3Q16798 604 aa13.49□□□□□ -0.25
USF1-201ENST00000368019 CREB3L3Q68CJ9 461 aa13.49□□□□□ -0.25
USF1-201ENST00000368019 TTC6Q86TZ1 520 aa13.49□□□□□ -0.25
USF1-201ENST00000368019 COA1Q9GZY4 146 aa13.49□□□□□ -0.25
USF1-201ENST00000368019 KCNF1Q9H3M0 494 aa13.49□□□□□ -0.25
USF1-201ENST00000368019 LEMD3Q9Y2U8 911 aa13.49□□□□□ -0.25
USF1-201ENST00000368019 MRVI1Q9Y6F6 885 aa13.49□□□□□ -0.25
USF1-201ENST00000368019 MYO3BQ8WXR4 1341 aa13.48□□□□□ -0.25
USF1-201ENST00000368019 SMTNL1A8MU46 457 aa13.48□□□□□ -0.25
USF1-201ENST00000368019 WNT10BO00744 389 aa13.48□□□□□ -0.25
USF1-201ENST00000368019 CTAGE5O15320 804 aa13.48□□□□□ -0.25
USF1-201ENST00000368019 IFIT2P09913 472 aaKnown RBP13.48□□□□□ -0.25
USF1-201ENST00000368019 NBPF7P0C2Y1 421 aaPredicted RBP13.48□□□□□ -0.25
USF1-201ENST00000368019 MMP14P50281 582 aa13.48□□□□□ -0.25
USF1-201ENST00000368019 PTH1RQ03431 593 aa13.48□□□□□ -0.25
USF1-201ENST00000368019 LARP1BQ659C4 914 aaKnown RBP13.48□□□□□ -0.25
USF1-201ENST00000368019 ATL3Q6DD88 541 aa13.48□□□□□ -0.25
USF1-201ENST00000368019 SARM1Q6SZW1 724 aa13.48□□□□□ -0.25
USF1-201ENST00000368019 MOB2Q70IA6 237 aa13.48□□□□□ -0.25
USF1-201ENST00000368019 PLA2G4DQ86XP0 818 aa13.48□□□□□ -0.25
USF1-201ENST00000368019 CHMP4CQ96CF2 233 aa13.48□□□□□ -0.25
USF1-201ENST00000368019 CLSTN2Q9H4D0 955 aa13.48□□□□□ -0.25
USF1-201ENST00000368019 SCAF8Q9UPN6 1271 aaKnown RBP13.48□□□□□ -0.25
USF1-201ENST00000368019 PAXBP1Q9Y5B6 917 aa13.48□□□□□ -0.25
USF1-201ENST00000368019 RBM8AQ9Y5S9 174 aaKnown RBP13.48□□□□□ -0.25
USF1-201ENST00000368019 ZNF804BA4D1E1 1349 aa13.47□□□□□ -0.25
USF1-201ENST00000368019 IRS2Q9Y4H2 1338 aa13.47□□□□□ -0.25
USF1-201ENST00000368019 KIF20AO95235 890 aa13.47□□□□□ -0.25
USF1-201ENST00000368019 ITGA6P23229 1130 aa13.47□□□□□ -0.25
USF1-201ENST00000368019 RPS6KB1P23443 525 aa13.47□□□□□ -0.25
USF1-201ENST00000368019 KLRK1P26718 216 aa13.47□□□□□ -0.25
USF1-201ENST00000368019 IGHMBP2P38935 993 aaKnown RBP13.47□□□□□ -0.25
USF1-201ENST00000368019 OS9Q13438 667 aaPredicted RBP13.47□□□□□ -0.25
USF1-201ENST00000368019 DHX8Q14562 1220 aaKnown RBP13.47□□□□□ -0.25
USF1-201ENST00000368019 PRAMEF18Q5VWM3 479 aa13.47□□□□□ -0.25
USF1-201ENST00000368019 BLOC1S2Q6QNY1 142 aa13.47□□□□□ -0.25
USF1-201ENST00000368019 ZBED3Q96IU2 234 aaPredicted RBP13.47□□□□□ -0.25
USF1-201ENST00000368019 ANKRD2Q9GZV1 360 aa13.47□□□□□ -0.25
USF1-201ENST00000368019 TNMDQ9H2S6 317 aa13.47□□□□□ -0.25
USF1-201ENST00000368019 ZSCAN16Q9H4T2 348 aaPredicted RBP13.47□□□□□ -0.25
USF1-201ENST00000368019 ECM29Q5VYK3 1845 aa13.47□□□□□ -0.25
USF1-201ENST00000368019 UBE2Q2LH0YL09 131 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms