RNA–Protein interactions for RNA: ENST00000367404.8

NUP43-203, Transcript of nucleoporin 43, humanhuman

TSL 2 BASIC

Gene NUP43, Length 1,089 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-203ENST00000367404 SRCIN1Q9C0H9 1055 aa12.39□□□□□ -0.43
NUP43-203ENST00000367404 ZFYVE28Q9HCC9 887 aa12.39□□□□□ -0.43
NUP43-203ENST00000367404 ZCCHC17Q9NP64 241 aaKnown RBP12.39□□□□□ -0.43
NUP43-203ENST00000367404 C9orf78Q9NZ63 289 aaPredicted RBP12.39□□□□□ -0.43
NUP43-203ENST00000367404 SNCAIPQ9Y6H5 919 aa12.39□□□□□ -0.43
NUP43-203ENST00000367404 CACNA1FO60840 1977 aa12.39□□□□□ -0.43
NUP43-203ENST00000367404 RPAP1Q9BWH6 1393 aaPredicted RBP12.39□□□□□ -0.43
NUP43-203ENST00000367404 ARHGEF6Q15052 776 aa12.38□□□□□ -0.43
NUP43-203ENST00000367404 VGLL2Q8N8G2 317 aa12.38□□□□□ -0.43
NUP43-203ENST00000367404 TBC1D22AQ8WUA7 517 aa12.38□□□□□ -0.43
NUP43-203ENST00000367404 CSADQ9Y600 493 aa12.38□□□□□ -0.43
NUP43-203ENST00000367404 PTCH2Q9Y6C5 1203 aa12.38□□□□□ -0.43
NUP43-203ENST00000367404 NBPF7P0C2Y1 421 aaPredicted RBP12.37□□□□□ -0.43
NUP43-203ENST00000367404 FOSBP53539 338 aa12.37□□□□□ -0.43
NUP43-203ENST00000367404 FKBP1CQ5VVH2 108 aa12.37□□□□□ -0.43
NUP43-203ENST00000367404 FAM83AQ86UY5 434 aa12.37□□□□□ -0.43
NUP43-203ENST00000367404 ZDHHC15Q96MV8 337 aa12.37□□□□□ -0.43
NUP43-203ENST00000367404 MRIQ9BWK5 157 aa12.37□□□□□ -0.43
NUP43-203ENST00000367404 MRS2Q9HD23 443 aa12.37□□□□□ -0.43
NUP43-203ENST00000367404 KIF16BQ96L93 1317 aa12.37□□□□□ -0.43
NUP43-203ENST00000367404 TLR2O60603 784 aa12.36□□□□□ -0.43
NUP43-203ENST00000367404 SLC9C1Q4G0N8 1177 aa12.36□□□□□ -0.43
NUP43-203ENST00000367404 ERO1BQ86YB8 467 aa12.36□□□□□ -0.43
NUP43-203ENST00000367404 ANKRD44Q8N8A2 993 aa12.36□□□□□ -0.43
NUP43-203ENST00000367404 TEKT1Q969V4 418 aa12.36□□□□□ -0.43
NUP43-203ENST00000367404 BICC1Q9H694 974 aaKnown RBP12.36□□□□□ -0.43
NUP43-203ENST00000367404 SUGT1Q9Y2Z0 365 aa12.36□□□□□ -0.43
NUP43-203ENST00000367404 BTBD19C9JJ37 291 aa12.35□□□□□ -0.43
NUP43-203ENST00000367404 TK2O00142 265 aa12.35□□□□□ -0.43
NUP43-203ENST00000367404 CETPP11597 493 aa12.35□□□□□ -0.43
NUP43-203ENST00000367404 FXR1P51114 621 aaKnown RBP eCLIP12.35□□□□□ -0.43
NUP43-203ENST00000367404 CACNB3P54284 484 aa12.35□□□□□ -0.43
NUP43-203ENST00000367404 LACTBP83111 547 aaPredicted RBP12.35□□□□□ -0.43
NUP43-203ENST00000367404 CHAF1AQ13111 956 aaPredicted RBP12.35□□□□□ -0.43
NUP43-203ENST00000367404 PPIL2Q13356 520 aa12.35□□□□□ -0.43
NUP43-203ENST00000367404 CAMK2BQ13554 666 aa12.35□□□□□ -0.43
NUP43-203ENST00000367404 LRRC24Q50LG9 513 aa12.35□□□□□ -0.43
NUP43-203ENST00000367404 CAVIN4Q5BKX8 364 aa12.35□□□□□ -0.43
NUP43-203ENST00000367404 APOBEC3HQ6NTF7 200 aaKnown RBP12.35□□□□□ -0.43
NUP43-203ENST00000367404 SLC4A10Q6U841 1118 aa12.35□□□□□ -0.43
NUP43-203ENST00000367404 NBPF11Q86T75 865 aa12.35□□□□□ -0.43
NUP43-203ENST00000367404 HOOK2Q96ED9 719 aa12.35□□□□□ -0.43
NUP43-203ENST00000367404 WRNIP1Q96S55 665 aa12.35□□□□□ -0.43
NUP43-203ENST00000367404 IQSEC3Q9UPP2 1182 aaPredicted RBP12.35□□□□□ -0.43
NUP43-203ENST00000367404 SALL2Q9Y467 1007 aaPredicted RBP12.35□□□□□ -0.43
NUP43-203ENST00000367404 MAST3O60307 1309 aa12.35□□□□□ -0.43
NUP43-203ENST00000367404 IRF6O14896 467 aa12.34□□□□□ -0.43
NUP43-203ENST00000367404 PDE8BO95263 885 aa12.34□□□□□ -0.43
NUP43-203ENST00000367404 GNRH1P01148 92 aa12.34□□□□□ -0.43
NUP43-203ENST00000367404 FGFR2P21802 821 aa12.34□□□□□ -0.43
NUP43-203ENST00000367404 SNAPC2Q13487 334 aa12.34□□□□□ -0.43
NUP43-203ENST00000367404 METTL24Q5JXM2 366 aa12.34□□□□□ -0.43
NUP43-203ENST00000367404 VPS37DQ86XT2 251 aa12.34□□□□□ -0.43
NUP43-203ENST00000367404 ZKSCAN4Q969J2 545 aaPredicted RBP12.34□□□□□ -0.43
NUP43-203ENST00000367404 KCNK17Q96T54 332 aa12.34□□□□□ -0.43
NUP43-203ENST00000367404 ARHGAP39Q9C0H5 1083 aa12.34□□□□□ -0.43
NUP43-203ENST00000367404 ADGRA2Q96PE1 1338 aa12.34□□□□□ -0.43
NUP43-203ENST00000367404 WDHD1O75717 1129 aaPredicted RBP12.33□□□□□ -0.44
NUP43-203ENST00000367404 BCAMP50895 628 aa12.33□□□□□ -0.44
NUP43-203ENST00000367404 PRMT2P55345 433 aa12.33□□□□□ -0.44
NUP43-203ENST00000367404 HHIPL2Q6UWX4 724 aa12.33□□□□□ -0.44
NUP43-203ENST00000367404 C17orf99Q6UX52 265 aa12.33□□□□□ -0.44
NUP43-203ENST00000367404 TMOD2Q9NZR1 351 aa12.33□□□□□ -0.44
NUP43-203ENST00000367404 ZNF521Q96K83 1311 aa12.33□□□□□ -0.44
NUP43-203ENST00000367404 HRO43593 1189 aa12.32□□□□□ -0.44
NUP43-203ENST00000367404 FRAT2O75474 233 aaPredicted RBP12.32□□□□□ -0.44
NUP43-203ENST00000367404 PPATQ06203 517 aa12.32□□□□□ -0.44
NUP43-203ENST00000367404 KIF22Q14807 665 aa12.32□□□□□ -0.44
NUP43-203ENST00000367404 PUM3Q15397 648 aaKnown RBP12.32□□□□□ -0.44
NUP43-203ENST00000367404 DCAF15Q66K64 600 aa12.32□□□□□ -0.44
NUP43-203ENST00000367404 SH3TC2Q8TF17 1288 aa12.32□□□□□ -0.44
NUP43-203ENST00000367404 ZNF112Q9UJU3 913 aa12.32□□□□□ -0.44
NUP43-203ENST00000367404 KCNH4Q9UQ05 1017 aa12.32□□□□□ -0.44
NUP43-203ENST00000367404 KIAA0100Q14667 2235 aaKnown RBP12.31□□□□□ -0.44
NUP43-203ENST00000367404 CTGFP29279 349 aa12.31□□□□□ -0.44
NUP43-203ENST00000367404 MOGSQ13724 837 aa12.31□□□□□ -0.44
NUP43-203ENST00000367404 SLC4A8Q2Y0W8 1093 aa12.31□□□□□ -0.44
NUP43-203ENST00000367404 NOL9Q5SY16 702 aaKnown RBP12.31□□□□□ -0.44
NUP43-203ENST00000367404 ANKRD23Q86SG2 305 aa12.31□□□□□ -0.44
NUP43-203ENST00000367404 MRPL50Q8N5N7 158 aaKnown RBP12.31□□□□□ -0.44
NUP43-203ENST00000367404 KLHDC4Q8TBB5 520 aa12.31□□□□□ -0.44
NUP43-203ENST00000367404 FAM151AQ8WW52 585 aa12.31□□□□□ -0.44
NUP43-203ENST00000367404 SHISA4Q96DD7 197 aa12.31□□□□□ -0.44
NUP43-203ENST00000367404 ZNF341Q9BYN7 854 aa12.31□□□□□ -0.44
NUP43-203ENST00000367404 PTPRCP08575 1304 aa12.31□□□□□ -0.44
NUP43-203ENST00000367404 ZSWIM8A7E2V4 1837 aa12.3□□□□□ -0.44
NUP43-203ENST00000367404 IFIT1P09914 478 aaKnown RBP12.3□□□□□ -0.44
NUP43-203ENST00000367404 INPP5BP32019 993 aa12.3□□□□□ -0.44
NUP43-203ENST00000367404 RFX5P48382 616 aaPredicted RBP12.3□□□□□ -0.44
NUP43-203ENST00000367404 ATRNL1Q5VV63 1379 aa12.3□□□□□ -0.44
NUP43-203ENST00000367404 RANBP2P49792 3224 aaKnown RBP12.29□□□□□ -0.44
NUP43-203ENST00000367404 UBE2Q1Q7Z7E8 422 aa12.29□□□□□ -0.44
NUP43-203ENST00000367404 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.29□□□□□ -0.44
NUP43-203ENST00000367404 WDR66Q8TBY9 1149 aa12.29□□□□□ -0.44
NUP43-203ENST00000367404 LPIN2Q92539 896 aa12.29□□□□□ -0.44
NUP43-203ENST00000367404 ZDHHC16Q969W1 377 aa12.29□□□□□ -0.44
NUP43-203ENST00000367404 TRIM47Q96LD4 638 aa12.29□□□□□ -0.44
NUP43-203ENST00000367404 USP44Q9H0E7 712 aa12.29□□□□□ -0.44
NUP43-203ENST00000367404 SRRDQ9UH36 339 aa12.29□□□□□ -0.44
NUP43-203ENST00000367404 DAGLAQ9Y4D2 1042 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms