RNA–Protein interactions for RNA: ENST00000366286.6

YBX3-203, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-203ENST00000366286 IFNL1Q8IU54 200 aa12.69□□□□□ -0.38
YBX3-203ENST00000366286 ZKSCAN4Q969J2 545 aaPredicted RBP12.69□□□□□ -0.38
YBX3-203ENST00000366286 ZNF341Q9BYN7 854 aa12.69□□□□□ -0.38
YBX3-203ENST00000366286 PIH1D3Q9NQM4 214 aaKnown RBP12.69□□□□□ -0.38
YBX3-203ENST00000366286 COL2A1P02458 1487 aaPredicted RBP12.68□□□□□ -0.38
YBX3-203ENST00000366286 IGF2BP3O00425 579 aaKnown RBP eCLIP12.68□□□□□ -0.38
YBX3-203ENST00000366286 ENTPD3O75355 529 aa12.68□□□□□ -0.38
YBX3-203ENST00000366286 LDHCP07864 332 aa12.68□□□□□ -0.38
YBX3-203ENST00000366286 KIF1BPQ96EK5 621 aa12.68□□□□□ -0.38
YBX3-203ENST00000366286 OTUD5Q96G74 571 aa12.68□□□□□ -0.38
YBX3-203ENST00000366286 NDUFB9Q9Y6M9 179 aa12.68□□□□□ -0.38
YBX3-203ENST00000366286 SPDYE5A6NIY4 337 aa12.67□□□□□ -0.38
YBX3-203ENST00000366286 INPP5BP32019 993 aa12.67□□□□□ -0.38
YBX3-203ENST00000366286 INHBEP58166 350 aa12.67□□□□□ -0.38
YBX3-203ENST00000366286 DGKZQ13574 1117 aa12.67□□□□□ -0.38
YBX3-203ENST00000366286 NAA16Q6N069 864 aaPredicted RBP12.67□□□□□ -0.38
YBX3-203ENST00000366286 SH3BP5LQ7L8J4 393 aa12.67□□□□□ -0.38
YBX3-203ENST00000366286 ADGRA1Q86SQ6 560 aa12.67□□□□□ -0.38
YBX3-203ENST00000366286 ZSCAN29Q8IWY8 852 aaPredicted RBP12.67□□□□□ -0.38
YBX3-203ENST00000366286 ABHD8Q96I13 439 aa12.67□□□□□ -0.38
YBX3-203ENST00000366286 CFHR5Q9BXR6 569 aa12.67□□□□□ -0.38
YBX3-203ENST00000366286 MCOLN1Q9GZU1 580 aa12.67□□□□□ -0.38
YBX3-203ENST00000366286 R3HDMLQ9H3Y0 253 aa12.67□□□□□ -0.38
YBX3-203ENST00000366286 ZSWIM8A7E2V4 1837 aa12.67□□□□□ -0.38
YBX3-203ENST00000366286 TESPA1A2RU30 521 aaPredicted RBP12.66□□□□□ -0.38
YBX3-203ENST00000366286 DDTLA6NHG4 134 aaPredicted RBP12.66□□□□□ -0.38
YBX3-203ENST00000366286 RAB11FIP3O75154 756 aa12.66□□□□□ -0.38
YBX3-203ENST00000366286 ALDH1A1P00352 501 aa12.66□□□□□ -0.38
YBX3-203ENST00000366286 RRP1P56182 461 aaKnown RBP12.66□□□□□ -0.38
YBX3-203ENST00000366286 ERO1BQ86YB8 467 aa12.66□□□□□ -0.38
YBX3-203ENST00000366286 CLASRPQ8N2M8 674 aaKnown RBP12.66□□□□□ -0.38
YBX3-203ENST00000366286 SH3RF3Q8TEJ3 882 aaPredicted RBP12.66□□□□□ -0.38
YBX3-203ENST00000366286 ZNF296Q8WUU4 475 aaPredicted RBP12.66□□□□□ -0.38
YBX3-203ENST00000366286 MS4A4AQ96JQ5 239 aa12.66□□□□□ -0.38
YBX3-203ENST00000366286 NOL10Q9BSC4 688 aaKnown RBP12.66□□□□□ -0.38
YBX3-203ENST00000366286 AATFQ9NY61 560 aaKnown RBP eCLIP12.66□□□□□ -0.38
YBX3-203ENST00000366286 ZNF112Q9UJU3 913 aa12.66□□□□□ -0.38
YBX3-203ENST00000366286 LOC285556D6RIA3 1793 aa12.66□□□□□ -0.38
YBX3-203ENST00000366286 MYH8P13535 1937 aa12.65□□□□□ -0.38
YBX3-203ENST00000366286 CCL15-CCL14A0A0B4J2E2 113 aa12.65□□□□□ -0.38
YBX3-203ENST00000366286 GPR25O00155 361 aa12.65□□□□□ -0.38
YBX3-203ENST00000366286 NPM3O75607 178 aaKnown RBP12.65□□□□□ -0.38
YBX3-203ENST00000366286 MAP4K4O95819 1239 aaPredicted RBP12.65□□□□□ -0.38
YBX3-203ENST00000366286 IFIT2P09913 472 aaKnown RBP12.65□□□□□ -0.38
YBX3-203ENST00000366286 SLURP2P0DP57 97 aa12.65□□□□□ -0.38
YBX3-203ENST00000366286 GTF2A2P52657 109 aa12.65□□□□□ -0.38
YBX3-203ENST00000366286 CCL15Q16663 113 aa12.65□□□□□ -0.38
YBX3-203ENST00000366286 NOM1Q5C9Z4 860 aaKnown RBP12.65□□□□□ -0.38
YBX3-203ENST00000366286 NOL9Q5SY16 702 aaKnown RBP12.65□□□□□ -0.38
YBX3-203ENST00000366286 TEX11Q8IYF3 940 aa12.65□□□□□ -0.38
YBX3-203ENST00000366286 BRI3BPQ8WY22 251 aa12.65□□□□□ -0.38
YBX3-203ENST00000366286 PTPN18Q99952 460 aa12.65□□□□□ -0.38
YBX3-203ENST00000366286 OSBPL5Q9H0X9 879 aaPredicted RBP12.65□□□□□ -0.38
YBX3-203ENST00000366286 BCL11AQ9H165 835 aa12.65□□□□□ -0.38
YBX3-203ENST00000366286 ANTXR1Q9H6X2 564 aa12.65□□□□□ -0.38
YBX3-203ENST00000366286 PHF20L1A8MW92 1017 aa12.64□□□□□ -0.39
YBX3-203ENST00000366286 IDH1O75874 414 aaKnown RBP12.64□□□□□ -0.39
YBX3-203ENST00000366286 PPIL2Q13356 520 aa12.64□□□□□ -0.39
YBX3-203ENST00000366286 OTUD7BQ6GQQ9 843 aa12.64□□□□□ -0.39
YBX3-203ENST00000366286 BAZ2AQ9UIF9 1905 aaKnown RBP12.63□□□□□ -0.39
YBX3-203ENST00000366286 FAM196BA6NMK8 535 aa12.63□□□□□ -0.39
YBX3-203ENST00000366286 IRF6O14896 467 aa12.63□□□□□ -0.39
YBX3-203ENST00000366286 IGSF3O75054 1194 aa12.63□□□□□ -0.39
YBX3-203ENST00000366286 BAG3O95817 575 aa12.63□□□□□ -0.39
YBX3-203ENST00000366286 PLCG2P16885 1265 aa12.63□□□□□ -0.39
YBX3-203ENST00000366286 PPATQ06203 517 aa12.63□□□□□ -0.39
YBX3-203ENST00000366286 CRHR2Q13324 411 aa12.63□□□□□ -0.39
YBX3-203ENST00000366286 CTU1Q7Z7A3 348 aaKnown RBP12.63□□□□□ -0.39
YBX3-203ENST00000366286 SCYL3Q8IZE3 742 aa12.63□□□□□ -0.39
YBX3-203ENST00000366286 MGAMO43451 1857 aa12.63□□□□□ -0.39
YBX3-203ENST00000366286 FLT1P17948 1338 aa12.62□□□□□ -0.39
YBX3-203ENST00000366286 FKTNO75072 461 aa12.62□□□□□ -0.39
YBX3-203ENST00000366286 CETPP11597 493 aa12.62□□□□□ -0.39
YBX3-203ENST00000366286 CYP7A1P22680 504 aa12.62□□□□□ -0.39
YBX3-203ENST00000366286 PPP4CP60510 307 aa12.62□□□□□ -0.39
YBX3-203ENST00000366286 MAP3K10Q02779 954 aa12.62□□□□□ -0.39
YBX3-203ENST00000366286 SNAPC2Q13487 334 aa12.62□□□□□ -0.39
YBX3-203ENST00000366286 FAM43AQ8N2R8 423 aa12.62□□□□□ -0.39
YBX3-203ENST00000366286 MAGEB6Q8N7X4 407 aa12.62□□□□□ -0.39
YBX3-203ENST00000366286 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.62□□□□□ -0.39
YBX3-203ENST00000366286 DNAJC2Q99543 621 aaKnown RBP12.62□□□□□ -0.39
YBX3-203ENST00000366286 LRRCC1Q9C099 1032 aa12.62□□□□□ -0.39
YBX3-203ENST00000366286 BTBD19C9JJ37 291 aa12.61□□□□□ -0.39
YBX3-203ENST00000366286 SMARCA5O60264 1052 aaPredicted RBP12.61□□□□□ -0.39
YBX3-203ENST00000366286 DYNLL1P63167 89 aaKnown RBP12.61□□□□□ -0.39
YBX3-203ENST00000366286 MAP3K12Q12852 859 aa12.61□□□□□ -0.39
YBX3-203ENST00000366286 TTF1Q15361 905 aaPredicted RBP12.61□□□□□ -0.39
YBX3-203ENST00000366286 TAF1CQ15572 869 aaPredicted RBP12.61□□□□□ -0.39
YBX3-203ENST00000366286 MAPKAPK5Q8IW41 473 aa12.61□□□□□ -0.39
YBX3-203ENST00000366286 MIGA1Q8NAN2 632 aa12.61□□□□□ -0.39
YBX3-203ENST00000366286 TGFBRAP1Q8WUH2 860 aa12.61□□□□□ -0.39
YBX3-203ENST00000366286 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.61□□□□□ -0.39
YBX3-203ENST00000366286 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.61□□□□□ -0.39
YBX3-203ENST00000366286 KCNH4Q9UQ05 1017 aa12.61□□□□□ -0.39
YBX3-203ENST00000366286 CCDC85CA6NKD9 419 aa12.6□□□□□ -0.39
YBX3-203ENST00000366286 GOLIM4O00461 696 aa12.6□□□□□ -0.39
YBX3-203ENST00000366286 TBC1D12O60347 775 aa12.6□□□□□ -0.39
YBX3-203ENST00000366286 PTPRAP18433 802 aa12.6□□□□□ -0.39
YBX3-203ENST00000366286 EDC3Q96F86 508 aaKnown RBP12.6□□□□□ -0.39
YBX3-203ENST00000366286 PICK1Q9NRD5 415 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms