RNA–Protein interactions for RNA: ENST00000362031.8

SNX6-201, Transcript of sorting nexin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX6, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-201ENST00000362031 CNTNAP1P78357 1384 aa12.87□□□□□ -0.35
SNX6-201ENST00000362031 RPAP1Q9BWH6 1393 aaPredicted RBP12.87□□□□□ -0.35
SNX6-201ENST00000362031 USP17L12C9JPN9 530 aa12.86□□□□□ -0.35
SNX6-201ENST00000362031 USP17L21D6R901 530 aa12.86□□□□□ -0.35
SNX6-201ENST00000362031 USP5P45974 858 aa12.86□□□□□ -0.35
SNX6-201ENST00000362031 PLCD1P51178 756 aa12.86□□□□□ -0.35
SNX6-201ENST00000362031 STK11IPQ8N1F8 1099 aa12.86□□□□□ -0.35
SNX6-201ENST00000362031 NOL10Q9BSC4 688 aaKnown RBP12.86□□□□□ -0.35
SNX6-201ENST00000362031 RRAGCQ9HB90 399 aa12.86□□□□□ -0.35
SNX6-201ENST00000362031 VEZTQ9HBM0 779 aa12.86□□□□□ -0.35
SNX6-201ENST00000362031 NMRK2Q9NPI5 230 aa12.86□□□□□ -0.35
SNX6-201ENST00000362031 HACL1Q9UJ83 578 aa12.86□□□□□ -0.35
SNX6-201ENST00000362031 FOCADQ5VW36 1801 aa12.86□□□□□ -0.35
SNX6-201ENST00000362031 POLR2AP24928 1970 aaKnown RBP12.86□□□□□ -0.35
SNX6-201ENST00000362031 DDTLA6NHG4 134 aaPredicted RBP12.86□□□□□ -0.35
SNX6-201ENST00000362031 GNAT2P19087 354 aa12.86□□□□□ -0.35
SNX6-201ENST00000362031 EPHX2P34913 555 aa12.86□□□□□ -0.35
SNX6-201ENST00000362031 HSPA4P34932 840 aa12.86□□□□□ -0.35
SNX6-201ENST00000362031 ALX1Q15699 326 aa12.86□□□□□ -0.35
SNX6-201ENST00000362031 CREB3L3Q68CJ9 461 aa12.86□□□□□ -0.35
SNX6-201ENST00000362031 IDI2Q9BXS1 227 aa12.86□□□□□ -0.35
SNX6-201ENST00000362031 TMEM39BQ9GZU3 492 aa12.86□□□□□ -0.35
SNX6-201ENST00000362031 TAF1DQ9H5J8 278 aaPredicted RBP12.86□□□□□ -0.35
SNX6-201ENST00000362031 ADARB2Q9NS39 739 aaKnown RBP12.86□□□□□ -0.35
SNX6-201ENST00000362031 MCM9Q9NXL9 1143 aa12.86□□□□□ -0.35
SNX6-201ENST00000362031 DDX60LQ5H9U9 1706 aaKnown RBP12.85□□□□□ -0.35
SNX6-201ENST00000362031 WDR90Q96KV7 1748 aa12.85□□□□□ -0.35
SNX6-201ENST00000362031 SLC27A2O14975 620 aa12.85□□□□□ -0.35
SNX6-201ENST00000362031 PLCG2P16885 1265 aa12.85□□□□□ -0.35
SNX6-201ENST00000362031 LMOD1P29536 600 aaPredicted RBP12.85□□□□□ -0.35
SNX6-201ENST00000362031 TDO2P48775 406 aa12.85□□□□□ -0.35
SNX6-201ENST00000362031 CTDSPL2Q05D32 466 aa12.85□□□□□ -0.35
SNX6-201ENST00000362031 ANGEL2Q5VTE6 544 aaKnown RBP12.85□□□□□ -0.35
SNX6-201ENST00000362031 PRAMEF18Q5VWM3 479 aa12.85□□□□□ -0.35
SNX6-201ENST00000362031 STOX1Q6ZVD7 989 aa12.85□□□□□ -0.35
SNX6-201ENST00000362031 KIF2CQ99661 725 aa12.85□□□□□ -0.35
SNX6-201ENST00000362031 C22orf23Q9BZE7 217 aa12.85□□□□□ -0.35
SNX6-201ENST00000362031 ATP8A2Q9NTI2 1148 aa12.85□□□□□ -0.35
SNX6-201ENST00000362031 PGAP2Q9UHJ9 254 aa12.85□□□□□ -0.35
SNX6-201ENST00000362031 MINDY4BA8MYZ0 360 aa12.84□□□□□ -0.35
SNX6-201ENST00000362031 ADCK5Q3MIX3 580 aa12.84□□□□□ -0.35
SNX6-201ENST00000362031 TBC1D10CQ8IV04 446 aa12.84□□□□□ -0.35
SNX6-201ENST00000362031 TBC1D32Q96NH3 1257 aa12.84□□□□□ -0.35
SNX6-201ENST00000362031 OSBPL5Q9H0X9 879 aaPredicted RBP12.84□□□□□ -0.35
SNX6-201ENST00000362031 NAPBQ9H115 298 aa12.84□□□□□ -0.35
SNX6-201ENST00000362031 GGA3Q9NZ52 723 aa12.84□□□□□ -0.35
SNX6-201ENST00000362031 KCNB2Q92953 911 aa12.84□□□□□ -0.35
SNX6-201ENST00000362031 DYNLL2Q96FJ2 89 aa12.84□□□□□ -0.35
SNX6-201ENST00000362031 SNX14Q9Y5W7 946 aa12.84□□□□□ -0.35
SNX6-201ENST00000362031 U3KPZ7 1027 aaPredicted RBP12.84□□□□□ -0.35
SNX6-201ENST00000362031 MYH1P12882 1939 aa12.83□□□□□ -0.36
SNX6-201ENST00000362031 MMP14P50281 582 aa12.83□□□□□ -0.36
SNX6-201ENST00000362031 GIMAP6Q6P9H5 292 aa12.83□□□□□ -0.36
SNX6-201ENST00000362031 SLC44A5Q8NCS7 719 aa12.83□□□□□ -0.36
SNX6-201ENST00000362031 TEPSINQ96N21 525 aa12.83□□□□□ -0.36
SNX6-201ENST00000362031 NAV1Q8NEY1 1877 aa12.83□□□□□ -0.36
SNX6-201ENST00000362031 SIPA1L1O43166 1804 aa12.83□□□□□ -0.36
SNX6-201ENST00000362031 SCN4AP35499 1836 aa12.83□□□□□ -0.36
SNX6-201ENST00000362031 FAM196BA6NMK8 535 aa12.83□□□□□ -0.36
SNX6-201ENST00000362031 CPA1P15085 419 aa12.83□□□□□ -0.36
SNX6-201ENST00000362031 RASA3Q14644 834 aa12.83□□□□□ -0.36
SNX6-201ENST00000362031 EAPPQ56P03 285 aaPredicted RBP12.83□□□□□ -0.36
SNX6-201ENST00000362031 C12orf60Q5U649 245 aa12.83□□□□□ -0.36
SNX6-201ENST00000362031 NACAP1Q9BZK3 213 aa12.83□□□□□ -0.36
SNX6-201ENST00000362031 ZMYM6O95789 1325 aa12.82□□□□□ -0.36
SNX6-201ENST00000362031 MYO1BO43795 1136 aa12.82□□□□□ -0.36
SNX6-201ENST00000362031 RBM25P49756 843 aaKnown RBP12.82□□□□□ -0.36
SNX6-201ENST00000362031 PPARAQ07869 468 aa12.82□□□□□ -0.36
SNX6-201ENST00000362031 CERS3Q8IU89 383 aa12.82□□□□□ -0.36
SNX6-201ENST00000362031 DEFB129Q9H1M3 183 aa12.82□□□□□ -0.36
SNX6-201ENST00000362031 DNAJC18Q9H819 358 aa12.82□□□□□ -0.36
SNX6-201ENST00000362031 TSHZ2Q9NRE2 1034 aa12.82□□□□□ -0.36
SNX6-201ENST00000362031 PRDM1O75626 825 aa12.81□□□□□ -0.36
SNX6-201ENST00000362031 SBK1Q52WX2 424 aa12.81□□□□□ -0.36
SNX6-201ENST00000362031 FAM151AQ8WW52 585 aa12.81□□□□□ -0.36
SNX6-201ENST00000362031 FZD1Q9UP38 647 aa12.81□□□□□ -0.36
SNX6-201ENST00000362031 NEDD4P46934 1319 aa12.81□□□□□ -0.36
SNX6-201ENST00000362031 IQCA1LA6NCM1 817 aa12.81□□□□□ -0.36
SNX6-201ENST00000362031 ADM5C9JUS6 153 aa12.81□□□□□ -0.36
SNX6-201ENST00000362031 ZNF213O14771 459 aa12.81□□□□□ -0.36
SNX6-201ENST00000362031 ENTPD3O75355 529 aa12.81□□□□□ -0.36
SNX6-201ENST00000362031 NPM3O75607 178 aaKnown RBP12.81□□□□□ -0.36
SNX6-201ENST00000362031 POLR3DP05423 398 aaPredicted RBP12.81□□□□□ -0.36
SNX6-201ENST00000362031 FMR1Q06787 632 aaKnown RBP eCLIP12.81□□□□□ -0.36
SNX6-201ENST00000362031 SHROOM1Q2M3G4 852 aaPredicted RBP12.81□□□□□ -0.36
SNX6-201ENST00000362031 FKBP1CQ5VVH2 108 aa12.81□□□□□ -0.36
SNX6-201ENST00000362031 USP50Q70EL3 339 aaPredicted RBP12.81□□□□□ -0.36
SNX6-201ENST00000362031 LAMA4Q16363 1823 aa12.8□□□□□ -0.36
SNX6-201ENST00000362031 E7EWF7 191 aa12.8□□□□□ -0.36
SNX6-201ENST00000362031 EPB41L2O43491 1005 aaKnown RBP12.8□□□□□ -0.36
SNX6-201ENST00000362031 VEGFAP15692 232 aaPredicted RBP12.8□□□□□ -0.36
SNX6-201ENST00000362031 IMMTQ16891 758 aaKnown RBP12.8□□□□□ -0.36
SNX6-201ENST00000362031 NBPF12Q5TAG4 269 aaPredicted RBP12.8□□□□□ -0.36
SNX6-201ENST00000362031 ZSCAN29Q8IWY8 852 aaPredicted RBP12.8□□□□□ -0.36
SNX6-201ENST00000362031 TMOD2Q9NZR1 351 aa12.8□□□□□ -0.36
SNX6-201ENST00000362031 ARPP21Q9UBL0 812 aaPredicted RBP12.8□□□□□ -0.36
SNX6-201ENST00000362031 CTNNA3Q9UI47 895 aa12.8□□□□□ -0.36
SNX6-201ENST00000362031 ANAPC4Q9UJX5 808 aa12.8□□□□□ -0.36
SNX6-201ENST00000362031 ATRNL1Q5VV63 1379 aa12.8□□□□□ -0.36
SNX6-201ENST00000362031 GABPAQ06546 454 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms