RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 CTAGE5O15320 804 aa10.47□□□□□ -0.73
TOP1-201ENST00000361337 DHX16O60231 1041 aaKnown RBP10.47□□□□□ -0.73
TOP1-201ENST00000361337 ATP5JP18859 108 aa10.47□□□□□ -0.73
TOP1-201ENST00000361337 MCMDC2Q4G0Z9 681 aa10.47□□□□□ -0.73
TOP1-201ENST00000361337 ARHGAP29Q52LW3 1261 aa10.47□□□□□ -0.73
TOP1-201ENST00000361337 CCDC93Q567U6 631 aa10.47□□□□□ -0.73
TOP1-201ENST00000361337 CAVIN4Q5BKX8 364 aa10.47□□□□□ -0.73
TOP1-201ENST00000361337 UBXN4Q92575 508 aa10.47□□□□□ -0.73
TOP1-201ENST00000361337 OSBPL5Q9H0X9 879 aaPredicted RBP10.47□□□□□ -0.73
TOP1-201ENST00000361337 L2HGDHQ9H9P8 463 aa10.47□□□□□ -0.73
TOP1-201ENST00000361337 AKAP2Q9Y2D5 859 aa10.47□□□□□ -0.73
TOP1-201ENST00000361337 SEC31AO94979 1220 aaKnown RBP10.47□□□□□ -0.73
TOP1-201ENST00000361337 LMOD1P29536 600 aaPredicted RBP10.47□□□□□ -0.73
TOP1-201ENST00000361337 GYG1P46976 350 aa10.47□□□□□ -0.73
TOP1-201ENST00000361337 RFX5P48382 616 aaPredicted RBP10.47□□□□□ -0.73
TOP1-201ENST00000361337 NAA16Q6N069 864 aaPredicted RBP10.47□□□□□ -0.73
TOP1-201ENST00000361337 DPF2Q92785 391 aa10.47□□□□□ -0.73
TOP1-201ENST00000361337 LRP6O75581 1613 aa10.47□□□□□ -0.73
TOP1-201ENST00000361337 SALL1Q9NSC2 1324 aa10.46□□□□□ -0.73
TOP1-201ENST00000361337 CPLX1O14810 134 aa10.46□□□□□ -0.73
TOP1-201ENST00000361337 SLC5A1P13866 664 aa10.46□□□□□ -0.73
TOP1-201ENST00000361337 PDIA3P30101 505 aaKnown RBP10.46□□□□□ -0.73
TOP1-201ENST00000361337 PLA2G4AP47712 749 aa10.46□□□□□ -0.73
TOP1-201ENST00000361337 TMCO3Q6UWJ1 677 aa10.46□□□□□ -0.73
TOP1-201ENST00000361337 DHX32Q7L7V1 743 aaKnown RBP10.46□□□□□ -0.73
TOP1-201ENST00000361337 XAGE2Q96GT9 111 aa10.46□□□□□ -0.73
TOP1-201ENST00000361337 U3KPZ7 1027 aaPredicted RBP10.46□□□□□ -0.73
TOP1-201ENST00000361337 NCAPHQ15003 741 aa10.46□□□□□ -0.73
TOP1-201ENST00000361337 KRBA2Q6ZNG9 492 aa10.46□□□□□ -0.73
TOP1-201ENST00000361337 ZSCAN29Q8IWY8 852 aaPredicted RBP10.46□□□□□ -0.73
TOP1-201ENST00000361337 MRPS27Q92552 414 aaKnown RBP10.46□□□□□ -0.73
TOP1-201ENST00000361337 SECISBP2LQ93073 1101 aaKnown RBP10.46□□□□□ -0.73
TOP1-201ENST00000361337 HSD3B7Q9H2F3 369 aa10.46□□□□□ -0.73
TOP1-201ENST00000361337 GNL3LQ9NVN8 582 aaKnown RBP10.46□□□□□ -0.73
TOP1-201ENST00000361337 ATF5Q9Y2D1 282 aaPredicted RBP10.46□□□□□ -0.73
TOP1-201ENST00000361337 COL16A1Q07092 1604 aaPredicted RBP10.46□□□□□ -0.74
TOP1-201ENST00000361337 PDE8AO60658 829 aa10.46□□□□□ -0.74
TOP1-201ENST00000361337 PHACTR2O75167 634 aa10.46□□□□□ -0.74
TOP1-201ENST00000361337 BCAMP50895 628 aa10.46□□□□□ -0.74
TOP1-201ENST00000361337 FAM193AP78312 1265 aa10.46□□□□□ -0.74
TOP1-201ENST00000361337 EXOSC10Q01780 885 aaKnown RBP10.46□□□□□ -0.74
TOP1-201ENST00000361337 NUP133Q8WUM0 1156 aa10.46□□□□□ -0.74
TOP1-201ENST00000361337 SLC4A9Q96Q91 983 aa10.46□□□□□ -0.74
TOP1-201ENST00000361337 KIAA1468Q9P260 1216 aa10.46□□□□□ -0.74
TOP1-201ENST00000361337 DNAI1Q9UI46 699 aa10.46□□□□□ -0.74
TOP1-201ENST00000361337 SPATA31A5Q5VU36 1347 aa10.45□□□□□ -0.74
TOP1-201ENST00000361337 SPATA31A7Q8IWB4 1347 aa10.45□□□□□ -0.74
TOP1-201ENST00000361337 URI1O94763 535 aaPredicted RBP10.45□□□□□ -0.74
TOP1-201ENST00000361337 PNMA6AP0CW24 399 aaPredicted RBP10.45□□□□□ -0.74
TOP1-201ENST00000361337 ZAP70P43403 619 aa10.45□□□□□ -0.74
TOP1-201ENST00000361337 E2F4Q16254 413 aa10.45□□□□□ -0.74
TOP1-201ENST00000361337 HSP90B2PQ58FF3 399 aa10.45□□□□□ -0.74
TOP1-201ENST00000361337 HSP90AA4PQ58FG1 418 aa10.45□□□□□ -0.74
TOP1-201ENST00000361337 PDILTQ8N807 584 aa10.45□□□□□ -0.74
TOP1-201ENST00000361337 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.45□□□□□ -0.742e-12■■■■□ 23.6
TOP1-201ENST00000361337 OVOS2A0A0G2JMS6 1433 aa10.45□□□□□ -0.74
TOP1-201ENST00000361337 CARMIL3Q8ND23 1372 aa10.45□□□□□ -0.74
TOP1-201ENST00000361337 E7EWF7 191 aa10.45□□□□□ -0.74
TOP1-201ENST00000361337 SFPQP23246 707 aaKnown RBP eCLIP10.45□□□□□ -0.74
TOP1-201ENST00000361337 MNAT1P51948 309 aa10.45□□□□□ -0.74
TOP1-201ENST00000361337 ARHGEF1Q92888 912 aaKnown RBP10.45□□□□□ -0.74
TOP1-201ENST00000361337 CCDC102AQ96A19 550 aa10.45□□□□□ -0.74
TOP1-201ENST00000361337 PLCD4Q9BRC7 762 aa10.45□□□□□ -0.74
TOP1-201ENST00000361337 RASSF4Q9H2L5 321 aa10.45□□□□□ -0.74
TOP1-201ENST00000361337 ZCCHC17Q9NP64 241 aaKnown RBP10.45□□□□□ -0.74
TOP1-201ENST00000361337 KIF28PB7ZC32 967 aa10.45□□□□□ -0.74
TOP1-201ENST00000361337 IL6STP40189 918 aaPredicted RBP10.45□□□□□ -0.74
TOP1-201ENST00000361337 ZBTB38Q8NAP3 1195 aaPredicted RBP10.45□□□□□ -0.74
TOP1-201ENST00000361337 LINC00301Q8NCQ3 95 aa10.45□□□□□ -0.74
TOP1-201ENST00000361337 RABEP2Q9H5N1 569 aa10.45□□□□□ -0.74
TOP1-201ENST00000361337 ARAP2Q8WZ64 1704 aa10.45□□□□□ -0.74
TOP1-201ENST00000361337 CTSWP56202 376 aa10.44□□□□□ -0.74
TOP1-201ENST00000361337 GSDMDP57764 484 aa10.44□□□□□ -0.74
TOP1-201ENST00000361337 SF3A1Q15459 793 aaKnown RBP10.44□□□□□ -0.74
TOP1-201ENST00000361337 LRRFIP1Q32MZ4 808 aaKnown RBP10.44□□□□□ -0.74
TOP1-201ENST00000361337 TBC1D9BQ66K14 1250 aa10.44□□□□□ -0.74
TOP1-201ENST00000361337 HAUS7Q99871 368 aa10.44□□□□□ -0.74
TOP1-201ENST00000361337 LLPHQ9BRT6 129 aaKnown RBP10.44□□□□□ -0.74
TOP1-201ENST00000361337 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.44□□□□□ -0.746e-13■□□□□ 11.3
TOP1-201ENST00000361337 KCND1Q9NSA2 647 aa10.44□□□□□ -0.74
TOP1-201ENST00000361337 PAG1Q9NWQ8 432 aa10.44□□□□□ -0.74
TOP1-201ENST00000361337 MROH7-TTC4A0A0A0MT08 1334 aa10.44□□□□□ -0.74
TOP1-201ENST00000361337 CAPN2P17655 700 aa10.44□□□□□ -0.74
TOP1-201ENST00000361337 MARCKSP29966 332 aaPredicted RBP10.44□□□□□ -0.74
TOP1-201ENST00000361337 TPM4P67936 248 aa10.44□□□□□ -0.74
TOP1-201ENST00000361337 DHX8Q14562 1220 aaKnown RBP10.44□□□□□ -0.74
TOP1-201ENST00000361337 VPS72Q15906 364 aa10.44□□□□□ -0.74
TOP1-201ENST00000361337 DZIP1Q86YF9 867 aaKnown RBP10.44□□□□□ -0.74
TOP1-201ENST00000361337 LINC00116Q8NCU8 138 aa10.44□□□□□ -0.74
TOP1-201ENST00000361337 ZNF396Q96N95 335 aaPredicted RBP10.44□□□□□ -0.74
TOP1-201ENST00000361337 ANKRD36CQ5JPF3 1778 aa10.44□□□□□ -0.74
TOP1-201ENST00000361337 TMEM232C9JQI7 657 aa10.44□□□□□ -0.74
TOP1-201ENST00000361337 ST5P78524 1137 aa10.44□□□□□ -0.74
TOP1-201ENST00000361337 ADALQ6DHV7 355 aa10.44□□□□□ -0.74
TOP1-201ENST00000361337 TRIM65Q6PJ69 517 aa10.44□□□□□ -0.74
TOP1-201ENST00000361337 LOC102724159A0A0B4J2E5 919 aa10.43□□□□□ -0.74
TOP1-201ENST00000361337 HSPD1P10809 573 aaKnown RBP10.43□□□□□ -0.74
TOP1-201ENST00000361337 PWP2Q15269 919 aaKnown RBP10.43□□□□□ -0.74
TOP1-201ENST00000361337 NKX2-3Q8TAU0 364 aa10.43□□□□□ -0.74
TOP1-201ENST00000361337 AIFM3Q96NN9 605 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms