RNA–Protein interactions for RNA: ENST00000361308.8

LMNA-202, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 1,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-202ENST00000361308 USP50Q70EL3 339 aaPredicted RBP20.23■□□□□ 0.83
LMNA-202ENST00000361308 AMOTL1Q8IY63 956 aa20.23■□□□□ 0.83
LMNA-202ENST00000361308 DDX4Q9NQI0 724 aaKnown RBP20.23■□□□□ 0.83
LMNA-202ENST00000361308 ZMYM6O95789 1325 aa20.23■□□□□ 0.83
LMNA-202ENST00000361308 POTECB2RU33 542 aa20.22■□□□□ 0.83
LMNA-202ENST00000361308 TCP10L2B9ZVM9 353 aa20.22■□□□□ 0.83
LMNA-202ENST00000361308 USP17L12C9JPN9 530 aa20.22■□□□□ 0.83
LMNA-202ENST00000361308 USP17L21D6R901 530 aa20.22■□□□□ 0.83
LMNA-202ENST00000361308 ZNF213O14771 459 aa20.22■□□□□ 0.83
LMNA-202ENST00000361308 FKBP1CQ5VVH2 108 aa20.22■□□□□ 0.83
LMNA-202ENST00000361308 CTR9Q6PD62 1173 aa20.22■□□□□ 0.83
LMNA-202ENST00000361308 FAM198AQ9UFP1 575 aa20.22■□□□□ 0.83
LMNA-202ENST00000361308 ENTPD3O75355 529 aa20.22■□□□□ 0.83
LMNA-202ENST00000361308 POLR3DP05423 398 aaPredicted RBP20.22■□□□□ 0.83
LMNA-202ENST00000361308 OSBPL5Q9H0X9 879 aaPredicted RBP20.22■□□□□ 0.83
LMNA-202ENST00000361308 TAF1DQ9H5J8 278 aaPredicted RBP20.22■□□□□ 0.83
LMNA-202ENST00000361308 ARPP21Q9UBL0 812 aaPredicted RBP20.22■□□□□ 0.83
LMNA-202ENST00000361308 SAP30BPQ9UHR5 308 aaKnown RBP20.22■□□□□ 0.83
LMNA-202ENST00000361308 MINDY4BA8MYZ0 360 aa20.21■□□□□ 0.83
LMNA-202ENST00000361308 VEGFAP15692 232 aaPredicted RBP20.21■□□□□ 0.83
LMNA-202ENST00000361308 ZKSCAN1P17029 563 aaPredicted RBP20.21■□□□□ 0.83
LMNA-202ENST00000361308 TNNI2P48788 182 aa20.21■□□□□ 0.83
LMNA-202ENST00000361308 TNFAIP1Q13829 316 aa20.21■□□□□ 0.83
LMNA-202ENST00000361308 ANGEL2Q5VTE6 544 aaKnown RBP20.21■□□□□ 0.83
LMNA-202ENST00000361308 CREB3L3Q68CJ9 461 aa20.21■□□□□ 0.83
LMNA-202ENST00000361308 PNMA8AQ86V59 439 aaPredicted RBP20.21■□□□□ 0.83
LMNA-202ENST00000361308 RRAGCQ9HB90 399 aa20.21■□□□□ 0.83
LMNA-202ENST00000361308 PALD1Q9ULE6 856 aa20.21■□□□□ 0.83
LMNA-202ENST00000361308 CYP21A2P08686 494 aa20.2■□□□□ 0.82
LMNA-202ENST00000361308 HAND2P61296 217 aa20.2■□□□□ 0.82
LMNA-202ENST00000361308 SBK1Q52WX2 424 aa20.2■□□□□ 0.82
LMNA-202ENST00000361308 ASTN2O75129 1339 aaPredicted RBP20.2■□□□□ 0.82
LMNA-202ENST00000361308 SLC27A2O14975 620 aa20.19■□□□□ 0.82
LMNA-202ENST00000361308 FAM83AQ86UY5 434 aa20.19■□□□□ 0.82
LMNA-202ENST00000361308 ZSCAN29Q8IWY8 852 aaPredicted RBP20.19■□□□□ 0.82
LMNA-202ENST00000361308 ZFPM1Q8IX07 1006 aa20.19■□□□□ 0.82
LMNA-202ENST00000361308 ZNF526Q8TF50 670 aaPredicted RBP20.19■□□□□ 0.82
LMNA-202ENST00000361308 DHX36Q9H2U1 1008 aaKnown RBP20.19■□□□□ 0.82
LMNA-202ENST00000361308 WDR90Q96KV7 1748 aa20.19■□□□□ 0.82
LMNA-202ENST00000361308 RBM25P49756 843 aaKnown RBP20.19■□□□□ 0.82
LMNA-202ENST00000361308 PPARAQ07869 468 aa20.19■□□□□ 0.82
LMNA-202ENST00000361308 SLC4A8Q2Y0W8 1093 aa20.19■□□□□ 0.82
LMNA-202ENST00000361308 EAPPQ56P03 285 aaPredicted RBP20.19■□□□□ 0.82
LMNA-202ENST00000361308 C12orf60Q5U649 245 aa20.19■□□□□ 0.82
LMNA-202ENST00000361308 TTC6Q86TZ1 520 aa20.19■□□□□ 0.82
LMNA-202ENST00000361308 FAM151AQ8WW52 585 aa20.19■□□□□ 0.82
LMNA-202ENST00000361308 GGA3Q9NZ52 723 aa20.19■□□□□ 0.82
LMNA-202ENST00000361308 SCN4AP35499 1836 aa20.18■□□□□ 0.82
LMNA-202ENST00000361308 CYP2D7A0A087X1C5 515 aa20.18■□□□□ 0.82
LMNA-202ENST00000361308 APOBEC3FQ8IUX4 373 aaKnown RBP20.18■□□□□ 0.82
LMNA-202ENST00000361308 ZC3H15Q8WU90 426 aaKnown RBP20.18■□□□□ 0.82
LMNA-202ENST00000361308 DCPSQ96C86 337 aaKnown RBP20.18■□□□□ 0.82
LMNA-202ENST00000361308 TBC1D32Q96NH3 1257 aa20.18■□□□□ 0.82
LMNA-202ENST00000361308 CYP2D6P10635 497 aa20.17■□□□□ 0.82
LMNA-202ENST00000361308 PLCD1P51178 756 aa20.17■□□□□ 0.82
LMNA-202ENST00000361308 RASA3Q14644 834 aa20.17■□□□□ 0.82
LMNA-202ENST00000361308 SCAF8Q9UPN6 1271 aaKnown RBP20.17■□□□□ 0.82
LMNA-202ENST00000361308 ECM29Q5VYK3 1845 aa20.16■□□□□ 0.82
LMNA-202ENST00000361308 HLA-DOAP06340 250 aa20.16■□□□□ 0.82
LMNA-202ENST00000361308 SLC3A2P08195 630 aaKnown RBP20.16■□□□□ 0.82
LMNA-202ENST00000361308 CTDSPL2Q05D32 466 aa20.16■□□□□ 0.82
LMNA-202ENST00000361308 RASEFQ8IZ41 740 aa20.16■□□□□ 0.82
LMNA-202ENST00000361308 KCNB2Q92953 911 aa20.16■□□□□ 0.82
LMNA-202ENST00000361308 DEFB129Q9H1M3 183 aa20.16■□□□□ 0.82
LMNA-202ENST00000361308 ANAPC4Q9UJX5 808 aa20.16■□□□□ 0.82
LMNA-202ENST00000361308 CNTNAP1P78357 1384 aa20.16■□□□□ 0.82
LMNA-202ENST00000361308 PITPNM2Q9BZ72 1349 aa20.16■□□□□ 0.82
LMNA-202ENST00000361308 DDTLA6NHG4 134 aaPredicted RBP20.16■□□□□ 0.82
LMNA-202ENST00000361308 ANAPC15P60006 121 aa20.16■□□□□ 0.82
LMNA-202ENST00000361308 TSGA10IPQ3SY00 556 aa20.16■□□□□ 0.82
LMNA-202ENST00000361308 TMEM39BQ9GZU3 492 aa20.16■□□□□ 0.82
LMNA-202ENST00000361308 PI4KBQ9UBF8 816 aa20.16■□□□□ 0.82
LMNA-202ENST00000361308 SNX14Q9Y5W7 946 aa20.16■□□□□ 0.82
LMNA-202ENST00000361308 CDK5RAP2Q96SN8 1893 aa20.15■□□□□ 0.82
LMNA-202ENST00000361308 BAZ2AQ9UIF9 1905 aaKnown RBP20.15■□□□□ 0.82
LMNA-202ENST00000361308 SH3BP5LQ7L8J4 393 aa20.15■□□□□ 0.82
LMNA-202ENST00000361308 STK11IPQ8N1F8 1099 aa20.15■□□□□ 0.82
LMNA-202ENST00000361308 NMRK2Q9NPI5 230 aa20.15■□□□□ 0.82
LMNA-202ENST00000361308 CLEC11AQ9Y240 323 aa20.15■□□□□ 0.82
LMNA-202ENST00000361308 SMIM22K7EJ46 135 aa20.14■□□□□ 0.81
LMNA-202ENST00000361308 KRT32Q14532 448 aa20.14■□□□□ 0.81
LMNA-202ENST00000361308 AKNAD1Q5T1N1 836 aa20.14■□□□□ 0.81
LMNA-202ENST00000361308 MFSD6Q6ZSS7 791 aa20.14■□□□□ 0.81
LMNA-202ENST00000361308 SULF1Q8IWU6 871 aa20.14■□□□□ 0.81
LMNA-202ENST00000361308 CSRNP1Q96S65 589 aa20.14■□□□□ 0.81
LMNA-202ENST00000361308 RNF41Q9H4P4 317 aaPredicted RBP20.14■□□□□ 0.81
LMNA-202ENST00000361308 PGAP2Q9UHJ9 254 aa20.14■□□□□ 0.81
LMNA-202ENST00000361308 TAF6LQ9Y6J9 622 aa20.14■□□□□ 0.81
LMNA-202ENST00000361308 FOCADQ5VW36 1801 aa20.14■□□□□ 0.81
LMNA-202ENST00000361308 ATRNL1Q5VV63 1379 aa20.14■□□□□ 0.81
LMNA-202ENST00000361308 EVX2Q03828 476 aa20.13■□□□□ 0.81
LMNA-202ENST00000361308 PDE4BQ07343 736 aa20.13■□□□□ 0.81
LMNA-202ENST00000361308 FOXP4Q8IVH2 680 aaPredicted RBP20.13■□□□□ 0.81
LMNA-202ENST00000361308 NBPF3Q9H094 633 aa20.13■□□□□ 0.81
LMNA-202ENST00000361308 SERPINB13Q9UIV8 391 aa20.13■□□□□ 0.81
LMNA-202ENST00000361308 E7EWF7 191 aa20.13■□□□□ 0.81
LMNA-202ENST00000361308 TRDNQ13061 729 aa20.13■□□□□ 0.81
LMNA-202ENST00000361308 TBC1D10CQ8IV04 446 aa20.13■□□□□ 0.81
LMNA-202ENST00000361308 STAG1Q8WVM7 1258 aa20.13■□□□□ 0.81
LMNA-202ENST00000361308 PPP2R3BQ9Y5P8 575 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms