RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 VGLL3A8MV65 326 aa19.23■□□□□ 0.67
CACNA1A-201ENST00000360228 BSPRYQ5W0U4 402 aa19.23■□□□□ 0.67
CACNA1A-201ENST00000360228 VEZTQ9HBM0 779 aa19.23■□□□□ 0.67
CACNA1A-201ENST00000360228 PKD2L1Q9P0L9 805 aa19.23■□□□□ 0.67
CACNA1A-201ENST00000360228 TRAF5O00463 557 aa19.23■□□□□ 0.67
CACNA1A-201ENST00000360228 GSTA1P08263 222 aa19.23■□□□□ 0.67
CACNA1A-201ENST00000360228 GSTA2P09210 222 aa19.23■□□□□ 0.67
CACNA1A-201ENST00000360228 ASIC2Q16515 512 aa19.23■□□□□ 0.67
CACNA1A-201ENST00000360228 NBPF5PQ86XG9 351 aaPredicted RBP19.23■□□□□ 0.67
CACNA1A-201ENST00000360228 RASEFQ8IZ41 740 aa19.23■□□□□ 0.67
CACNA1A-201ENST00000360228 PEX19P40855 299 aa19.23■□□□□ 0.67
CACNA1A-201ENST00000360228 USTQ9Y2C2 406 aa19.23■□□□□ 0.67
CACNA1A-201ENST00000360228 IL1RL1Q01638 556 aa19.23■□□□□ 0.67
CACNA1A-201ENST00000360228 TTC22Q5TAA0 569 aa19.23■□□□□ 0.67
CACNA1A-201ENST00000360228 CYP26C1Q6V0L0 522 aa19.23■□□□□ 0.67
CACNA1A-201ENST00000360228 USP6NLQ92738 828 aa19.23■□□□□ 0.67
CACNA1A-201ENST00000360228 CABS1Q96KC9 395 aa19.23■□□□□ 0.67
CACNA1A-201ENST00000360228 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.23■□□□□ 0.67
CACNA1A-201ENST00000360228 SERPINB6P35237 376 aa19.22■□□□□ 0.67
CACNA1A-201ENST00000360228 CCNT1O60563 726 aaKnown RBP19.22■□□□□ 0.67
CACNA1A-201ENST00000360228 VWA3BQ502W6 1294 aa19.22■□□□□ 0.67
CACNA1A-201ENST00000360228 WAPLQ7Z5K2 1190 aa19.22■□□□□ 0.67
CACNA1A-201ENST00000360228 NOX5Q96PH1 765 aa19.22■□□□□ 0.67
CACNA1A-201ENST00000360228 NAP1L4Q99733 375 aaKnown RBP19.22■□□□□ 0.67
CACNA1A-201ENST00000360228 CCDC169A6NNP5 214 aa19.22■□□□□ 0.67
CACNA1A-201ENST00000360228 SPDYE16A6NNV3 312 aaPredicted RBP19.22■□□□□ 0.67
CACNA1A-201ENST00000360228 SPDYE2Q495Y8 402 aa19.22■□□□□ 0.67
CACNA1A-201ENST00000360228 PRIM1P49642 420 aaKnown RBP19.22■□□□□ 0.67
CACNA1A-201ENST00000360228 RARSP54136 660 aaKnown RBP19.22■□□□□ 0.67
CACNA1A-201ENST00000360228 NOP9Q86U38 636 aaKnown RBP19.22■□□□□ 0.67
CACNA1A-201ENST00000360228 GNA11P29992 359 aa19.21■□□□□ 0.67
CACNA1A-201ENST00000360228 SATB2Q9UPW6 733 aa19.21■□□□□ 0.67
CACNA1A-201ENST00000360228 SLC8A1P32418 973 aa19.21■□□□□ 0.67
CACNA1A-201ENST00000360228 KRT12Q99456 494 aa19.21■□□□□ 0.67
CACNA1A-201ENST00000360228 DCUN1D2Q6PH85 259 aa19.21■□□□□ 0.67
CACNA1A-201ENST00000360228 CALUO43852 315 aaPredicted RBP19.21■□□□□ 0.67
CACNA1A-201ENST00000360228 VWA3AA6NCI4 1184 aa19.21■□□□□ 0.67
CACNA1A-201ENST00000360228 NUB1Q9Y5A7 615 aa19.21■□□□□ 0.67
CACNA1A-201ENST00000360228 JADE1Q6IE81 842 aa19.21■□□□□ 0.67
CACNA1A-201ENST00000360228 CHST3Q7LGC8 479 aa19.21■□□□□ 0.67
CACNA1A-201ENST00000360228 SCHIP1Q9P0W5 487 aaPredicted RBP19.21■□□□□ 0.67
CACNA1A-201ENST00000360228 ORC6Q9Y5N6 252 aa19.21■□□□□ 0.67
CACNA1A-201ENST00000360228 PHLDB3Q6NSJ2 640 aa19.21■□□□□ 0.67
CACNA1A-201ENST00000360228 CASP2P42575 452 aa19.2■□□□□ 0.66
CACNA1A-201ENST00000360228 LRRC23Q53EV4 343 aaPredicted RBP19.2■□□□□ 0.66
CACNA1A-201ENST00000360228 KLHDC4Q8TBB5 520 aa19.2■□□□□ 0.66
CACNA1A-201ENST00000360228 SKA2Q8WVK7 121 aaPredicted RBP19.2■□□□□ 0.66
CACNA1A-201ENST00000360228 CEP104O60308 925 aa19.2■□□□□ 0.66
CACNA1A-201ENST00000360228 SV2BQ7L1I2 683 aa19.2■□□□□ 0.66
CACNA1A-201ENST00000360228 STRN3Q13033 797 aa19.2■□□□□ 0.66
CACNA1A-201ENST00000360228 MCMDC2Q4G0Z9 681 aa19.2■□□□□ 0.66
CACNA1A-201ENST00000360228 TCEANC2Q96MN5 208 aa19.2■□□□□ 0.66
CACNA1A-201ENST00000360228 IQSEC3Q9UPP2 1182 aaPredicted RBP19.2■□□□□ 0.66
CACNA1A-201ENST00000360228 MAGEB6P1A0A0J9YX57 407 aa19.2■□□□□ 0.66
CACNA1A-201ENST00000360228 C20orf194Q5TEA3 1177 aa19.2■□□□□ 0.66
CACNA1A-201ENST00000360228 CCDC93Q567U6 631 aa19.2■□□□□ 0.66
CACNA1A-201ENST00000360228 SPATS2Q86XZ4 545 aaKnown RBP19.2■□□□□ 0.66
CACNA1A-201ENST00000360228 TRIM56Q9BRZ2 755 aaKnown RBP19.2■□□□□ 0.66
CACNA1A-201ENST00000360228 U2AF2P26368 475 aaKnown RBP eCLIP19.2■□□□□ 0.66
CACNA1A-201ENST00000360228 CROCCP2Q86T23 111 aa19.2■□□□□ 0.66
CACNA1A-201ENST00000360228 CCDC105Q8IYK2 499 aa19.2■□□□□ 0.66
CACNA1A-201ENST00000360228 POMGNT1Q8WZA1 660 aa19.2■□□□□ 0.66
CACNA1A-201ENST00000360228 RIOK1Q9BRS2 568 aaKnown RBP19.2■□□□□ 0.66
CACNA1A-201ENST00000360228 SBNO2Q9Y2G9 1366 aa19.2■□□□□ 0.66
CACNA1A-201ENST00000360228 MMEL1Q495T6 779 aa19.2■□□□□ 0.66
CACNA1A-201ENST00000360228 NOD1Q9Y239 953 aa19.2■□□□□ 0.66
CACNA1A-201ENST00000360228 PSMB7Q99436 277 aa19.19■□□□□ 0.66
CACNA1A-201ENST00000360228 CDAN1Q8IWY9 1227 aa19.19■□□□□ 0.66
CACNA1A-201ENST00000360228 PPP1R12AO14974 1030 aaPredicted RBP19.19■□□□□ 0.66
CACNA1A-201ENST00000360228 GABPB1Q06547 395 aaPredicted RBP19.19■□□□□ 0.66
CACNA1A-201ENST00000360228 BMP2KLQ5H9B9 411 aa19.19■□□□□ 0.66
CACNA1A-201ENST00000360228 LRRD1A4D1F6 860 aa19.19■□□□□ 0.66
CACNA1A-201ENST00000360228 IGSF22Q8N9C0 903 aa19.19■□□□□ 0.66
CACNA1A-201ENST00000360228 HECW1Q76N89 1606 aa19.19■□□□□ 0.66
CACNA1A-201ENST00000360228 LRRC9Q6ZRR7 1453 aa19.19■□□□□ 0.66
CACNA1A-201ENST00000360228 UQCRFS1P1P0C7P4 283 aa19.19■□□□□ 0.66
CACNA1A-201ENST00000360228 GNL1P36915 607 aaPredicted RBP19.19■□□□□ 0.66
CACNA1A-201ENST00000360228 C4orf50Q6ZRC1 276 aa19.19■□□□□ 0.66
CACNA1A-201ENST00000360228 ZNF804AQ7Z570 1209 aa19.19■□□□□ 0.66
CACNA1A-201ENST00000360228 JARID2Q92833 1246 aaPredicted RBP19.19■□□□□ 0.66
CACNA1A-201ENST00000360228 TUBB2AQ13885 445 aa19.18■□□□□ 0.66
CACNA1A-201ENST00000360228 TUBB2BQ9BVA1 445 aa19.18■□□□□ 0.66
CACNA1A-201ENST00000360228 CARD10Q9BWT7 1032 aa19.18■□□□□ 0.66
CACNA1A-201ENST00000360228 MYH9P35579 1960 aaKnown RBP19.18■□□□□ 0.66
CACNA1A-201ENST00000360228 ARHGAP4P98171 946 aa19.18■□□□□ 0.66
CACNA1A-201ENST00000360228 F13A1P00488 732 aa19.18■□□□□ 0.66
CACNA1A-201ENST00000360228 CHMP6Q96FZ7 201 aa19.18■□□□□ 0.66
CACNA1A-201ENST00000360228 ZRANB1Q9UGI0 708 aa19.18■□□□□ 0.66
CACNA1A-201ENST00000360228 RIPOR2Q9Y4F9 1068 aa19.18■□□□□ 0.66
CACNA1A-201ENST00000360228 CNNM4Q6P4Q7 775 aa19.18■□□□□ 0.66
CACNA1A-201ENST00000360228 RSAD2Q8WXG1 361 aa19.18■□□□□ 0.66
CACNA1A-201ENST00000360228 ANKLE2Q86XL3 938 aa19.18■□□□□ 0.66
CACNA1A-201ENST00000360228 ZBTB12Q9Y330 459 aaPredicted RBP19.18■□□□□ 0.66
CACNA1A-201ENST00000360228 TROVE2P10155 538 aaKnown RBP eCLIP19.18■□□□□ 0.66
CACNA1A-201ENST00000360228 PPP1R9AQ9ULJ8 1098 aa19.18■□□□□ 0.66
CACNA1A-201ENST00000360228 TRIM27P14373 513 aa19.18■□□□□ 0.66
CACNA1A-201ENST00000360228 SCYL1Q96KG9 808 aa19.18■□□□□ 0.66
CACNA1A-201ENST00000360228 GINS2Q9Y248 185 aa19.18■□□□□ 0.66
CACNA1A-201ENST00000360228 HNRNPCL2B2RXH8 293 aa19.17■□□□□ 0.66
CACNA1A-201ENST00000360228 HNRNPCL1O60812 293 aaKnown RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms