RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 SRGAP1Q7Z6B7 1085 aa17.09■□□□□ 0.33
UBAP1-202ENST00000359544 ZBTB9Q96C00 473 aa17.09■□□□□ 0.33
UBAP1-202ENST00000359544 DHX58Q96C10 678 aa17.09■□□□□ 0.33
UBAP1-202ENST00000359544 EIF3CQ99613 913 aaKnown RBP17.09■□□□□ 0.33
UBAP1-202ENST00000359544 NCAPGQ9BPX3 1015 aa17.09■□□□□ 0.33
UBAP1-202ENST00000359544 CARMIL3Q8ND23 1372 aa17.09■□□□□ 0.33
UBAP1-202ENST00000359544 BEND6Q5SZJ8 279 aaPredicted RBP17.09■□□□□ 0.33
UBAP1-202ENST00000359544 PACS2Q86VP3 889 aa17.09■□□□□ 0.33
UBAP1-202ENST00000359544 CEP112Q8N8E3 955 aa17.09■□□□□ 0.33
UBAP1-202ENST00000359544 DPF2Q92785 391 aa17.09■□□□□ 0.33
UBAP1-202ENST00000359544 LRRC2Q9BYS8 371 aa17.09■□□□□ 0.33
UBAP1-202ENST00000359544 DEF6Q9H4E7 631 aa17.09■□□□□ 0.33
UBAP1-202ENST00000359544 TLR7Q9NYK1 1049 aaKnown RBP17.09■□□□□ 0.33
UBAP1-202ENST00000359544 RAB21Q9UL25 225 aa17.09■□□□□ 0.33
UBAP1-202ENST00000359544 EIF4A1P60842 406 aaKnown RBP17.08■□□□□ 0.33
UBAP1-202ENST00000359544 GUCY1B3Q02153 619 aa17.08■□□□□ 0.33
UBAP1-202ENST00000359544 TEFQ10587 303 aa17.08■□□□□ 0.33
UBAP1-202ENST00000359544 TUBB2AQ13885 445 aa17.08■□□□□ 0.33
UBAP1-202ENST00000359544 LINC00116Q8NCU8 138 aa17.08■□□□□ 0.33
UBAP1-202ENST00000359544 TUBB2BQ9BVA1 445 aa17.08■□□□□ 0.33
UBAP1-202ENST00000359544 ACBD3Q9H3P7 528 aa17.08■□□□□ 0.33
UBAP1-202ENST00000359544 STK32BQ9NY57 414 aa17.08■□□□□ 0.33
UBAP1-202ENST00000359544 SCN11AQ9UI33 1791 aa17.08■□□□□ 0.32
UBAP1-202ENST00000359544 CORO7P57737 925 aa17.08■□□□□ 0.32
UBAP1-202ENST00000359544 MCM6Q14566 821 aa17.08■□□□□ 0.32
UBAP1-202ENST00000359544 HSP90B2PQ58FF3 399 aa17.08■□□□□ 0.32
UBAP1-202ENST00000359544 FAM71BQ8TC56 605 aa17.08■□□□□ 0.32
UBAP1-202ENST00000359544 CCDC12Q8WUD4 166 aaPredicted RBP17.08■□□□□ 0.32
UBAP1-202ENST00000359544 AGXT2Q9BYV1 514 aa17.08■□□□□ 0.32
UBAP1-202ENST00000359544 GBP3Q9H0R5 595 aa17.08■□□□□ 0.32
UBAP1-202ENST00000359544 TUBE1Q9UJT0 475 aa17.08■□□□□ 0.32
UBAP1-202ENST00000359544 COL15A1P39059 1388 aa17.08■□□□□ 0.32
UBAP1-202ENST00000359544 CMA1P23946 247 aa17.07■□□□□ 0.32
UBAP1-202ENST00000359544 SLC27A3Q5K4L6 730 aa17.07■□□□□ 0.32
UBAP1-202ENST00000359544 MSANTD4Q8NCY6 345 aa17.07■□□□□ 0.32
UBAP1-202ENST00000359544 SMARCC1Q92922 1105 aaPredicted RBP17.07■□□□□ 0.32
UBAP1-202ENST00000359544 ATP2B1P20020 1258 aa17.07■□□□□ 0.32
UBAP1-202ENST00000359544 CCT2P78371 535 aaKnown RBP17.07■□□□□ 0.32
UBAP1-202ENST00000359544 OLFM4Q6UX06 510 aa17.07■□□□□ 0.32
UBAP1-202ENST00000359544 BRAPQ7Z569 592 aa17.07■□□□□ 0.32
UBAP1-202ENST00000359544 ZNF274Q96GC6 653 aaPredicted RBP17.07■□□□□ 0.32
UBAP1-202ENST00000359544 TFCP2L1Q9NZI6 479 aa17.07■□□□□ 0.32
UBAP1-202ENST00000359544 CLIC4Q9Y696 253 aa17.07■□□□□ 0.32
UBAP1-202ENST00000359544 MRC1P22897 1456 aa17.07■□□□□ 0.32
UBAP1-202ENST00000359544 LY75O60449 1722 aa17.06■□□□□ 0.32
UBAP1-202ENST00000359544 GOLGB1Q14789 3259 aaKnown RBP17.06■□□□□ 0.32
UBAP1-202ENST00000359544 CUTAO60888 179 aa17.06■□□□□ 0.32
UBAP1-202ENST00000359544 ZBTB7AO95365 584 aa17.06■□□□□ 0.32
UBAP1-202ENST00000359544 TUBBP07437 444 aa17.06■□□□□ 0.32
UBAP1-202ENST00000359544 TBX2Q13207 712 aaPredicted RBP17.06■□□□□ 0.32
UBAP1-202ENST00000359544 MCMDC2Q4G0Z9 681 aa17.06■□□□□ 0.32
UBAP1-202ENST00000359544 PFKFB1P16118 471 aa17.06■□□□□ 0.32
UBAP1-202ENST00000359544 EFCAB13Q8IY85 973 aa17.06■□□□□ 0.32
UBAP1-202ENST00000359544 AKT1S1Q96B36 256 aa17.06■□□□□ 0.32
UBAP1-202ENST00000359544 FAN1Q9Y2M0 1017 aa17.06■□□□□ 0.32
UBAP1-202ENST00000359544 RGPD3A6NKT7 1758 aaPredicted RBP17.05■□□□□ 0.32
UBAP1-202ENST00000359544 RGPD4Q7Z3J3 1758 aa17.05■□□□□ 0.32
UBAP1-202ENST00000359544 LAMA4Q16363 1823 aa17.05■□□□□ 0.32
UBAP1-202ENST00000359544 CPP00450 1065 aa17.05■□□□□ 0.32
UBAP1-202ENST00000359544 GOLGA8FQ08AF8 430 aa17.05■□□□□ 0.32
UBAP1-202ENST00000359544 GOLGA8DPQ0D2H9 430 aa17.05■□□□□ 0.32
UBAP1-202ENST00000359544 SUGP1Q8IWZ8 645 aaKnown RBP17.05■□□□□ 0.32
UBAP1-202ENST00000359544 SEC62Q99442 399 aaKnown RBP17.05■□□□□ 0.32
UBAP1-202ENST00000359544 ANKZF1Q9H8Y5 726 aa17.05■□□□□ 0.32
UBAP1-202ENST00000359544 L1RE1Q9UN81 338 aa17.05■□□□□ 0.32
UBAP1-202ENST00000359544 MAP3K2Q9Y2U5 619 aa17.05■□□□□ 0.32
UBAP1-202ENST00000359544 CEMIPQ8WUJ3 1361 aa17.05■□□□□ 0.32
UBAP1-202ENST00000359544 TMEM232C9JQI7 657 aa17.05■□□□□ 0.32
UBAP1-202ENST00000359544 ATP5JP18859 108 aa17.05■□□□□ 0.32
UBAP1-202ENST00000359544 EXOSC10Q01780 885 aaKnown RBP17.05■□□□□ 0.32
UBAP1-202ENST00000359544 SYNE3Q6ZMZ3 975 aa17.05■□□□□ 0.32
UBAP1-202ENST00000359544 TOGARAM2Q6ZUX3 1019 aa17.05■□□□□ 0.32
UBAP1-202ENST00000359544 MED4Q9NPJ6 270 aa17.05■□□□□ 0.32
UBAP1-202ENST00000359544 DBF4Q9UBU7 674 aaPredicted RBP17.05■□□□□ 0.32
UBAP1-202ENST00000359544 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.05■□□□□ 0.32
UBAP1-202ENST00000359544 ZNF609O15014 1411 aa17.05■□□□□ 0.32
UBAP1-202ENST00000359544 KDM3BQ7LBC6 1761 aa17.04■□□□□ 0.32
UBAP1-202ENST00000359544 STOX1Q6ZVD7 989 aa17.04■□□□□ 0.32
UBAP1-202ENST00000359544 PDILTQ8N807 584 aa17.04■□□□□ 0.32
UBAP1-202ENST00000359544 FAM107BQ9H098 131 aa17.04■□□□□ 0.32
UBAP1-202ENST00000359544 ATF5Q9Y2D1 282 aaPredicted RBP17.04■□□□□ 0.32
UBAP1-202ENST00000359544 BTBD11A6QL63 1104 aa17.04■□□□□ 0.32
UBAP1-202ENST00000359544 MYSM1Q5VVJ2 828 aa17.04■□□□□ 0.32
UBAP1-202ENST00000359544 KSR2Q6VAB6 950 aa17.04■□□□□ 0.32
UBAP1-202ENST00000359544 NCOA5Q9HCD5 579 aaKnown RBP17.04■□□□□ 0.32
UBAP1-202ENST00000359544 CDC23Q9UJX2 597 aa17.04■□□□□ 0.32
UBAP1-202ENST00000359544 PRAMEF22A3QJZ6 481 aa17.03■□□□□ 0.32
UBAP1-202ENST00000359544 GRM8O00222 908 aa17.03■□□□□ 0.32
UBAP1-202ENST00000359544 CCDC175P0C221 793 aa17.03■□□□□ 0.32
UBAP1-202ENST00000359544 PDIA3P30101 505 aaKnown RBP17.03■□□□□ 0.32
UBAP1-202ENST00000359544 SYKP43405 635 aa17.03■□□□□ 0.32
UBAP1-202ENST00000359544 SUCLG2Q96I99 432 aa17.03■□□□□ 0.32
UBAP1-202ENST00000359544 C8orf76Q96K31 380 aa17.03■□□□□ 0.32
UBAP1-202ENST00000359544 UTYO14607 1347 aa17.03■□□□□ 0.32
UBAP1-202ENST00000359544 PAPPAQ13219 1627 aa17.03■□□□□ 0.32
UBAP1-202ENST00000359544 SPECC1LQ69YQ0 1117 aa17.03■□□□□ 0.32
UBAP1-202ENST00000359544 ISM2Q6H9L7 571 aa17.03■□□□□ 0.32
UBAP1-202ENST00000359544 CCDC129Q6ZRS4 1044 aa17.03■□□□□ 0.32
UBAP1-202ENST00000359544 DNAJC10Q8IXB1 793 aa17.03■□□□□ 0.32
UBAP1-202ENST00000359544 TC2NQ8N9U0 490 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms