RNA–Protein interactions for RNA: ENST00000358525.8

SLC6A20-202, Transcript of solute carrier family 6 member 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A20, Length 5,423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-202ENST00000358525 PUS3Q9BZE2 481 aaKnown RBP16.56■□□□□ 0.24
SLC6A20-202ENST00000358525 PPP1R9BQ96SB3 815 aa16.56■□□□□ 0.24
SLC6A20-202ENST00000358525 MYSM1Q5VVJ2 828 aa16.56■□□□□ 0.24
SLC6A20-202ENST00000358525 CEP112Q8N8E3 955 aa16.56■□□□□ 0.24
SLC6A20-202ENST00000358525 SMARCC2Q8TAQ2 1214 aa16.56■□□□□ 0.24
SLC6A20-202ENST00000358525 ARID5AQ03989 594 aa16.56■□□□□ 0.24
SLC6A20-202ENST00000358525 PPP4R3AQ6IN85 833 aa16.56■□□□□ 0.24
SLC6A20-202ENST00000358525 FSD2A1L4K1 749 aa16.55■□□□□ 0.24
SLC6A20-202ENST00000358525 CETN2P41208 172 aa16.55■□□□□ 0.24
SLC6A20-202ENST00000358525 TRAPPC3LQ5T215 181 aa16.55■□□□□ 0.24
SLC6A20-202ENST00000358525 KRT83P78385 493 aa16.55■□□□□ 0.24
SLC6A20-202ENST00000358525 CNBD1Q8NA66 436 aa16.55■□□□□ 0.24
SLC6A20-202ENST00000358525 ZBTB38Q8NAP3 1195 aaPredicted RBP16.55■□□□□ 0.24
SLC6A20-202ENST00000358525 ZBTB9Q96C00 473 aa16.55■□□□□ 0.24
SLC6A20-202ENST00000358525 CCDC94Q9BW85 323 aaPredicted RBP16.55■□□□□ 0.24
SLC6A20-202ENST00000358525 MAPK8IP1Q9UQF2 711 aa16.55■□□□□ 0.24
SLC6A20-202ENST00000358525 TTC38Q5R3I4 469 aa16.55■□□□□ 0.24
SLC6A20-202ENST00000358525 AKNAD1Q5T1N1 836 aa16.55■□□□□ 0.24
SLC6A20-202ENST00000358525 CTNNBL1Q8WYA6 563 aaPredicted RBP16.55■□□□□ 0.24
SLC6A20-202ENST00000358525 CCDC42Q96M95 316 aa16.55■□□□□ 0.24
SLC6A20-202ENST00000358525 UFL1O94874 794 aa16.55■□□□□ 0.24
SLC6A20-202ENST00000358525 SCRN1Q12765 414 aa16.55■□□□□ 0.24
SLC6A20-202ENST00000358525 IGSF22Q8N9C0 903 aa16.55■□□□□ 0.24
SLC6A20-202ENST00000358525 CCNL1Q9UK58 526 aaPredicted RBP16.55■□□□□ 0.24
SLC6A20-202ENST00000358525 MACROD2A1Z1Q3 448 aa16.54■□□□□ 0.24
SLC6A20-202ENST00000358525 FGAP02671 866 aa16.54■□□□□ 0.24
SLC6A20-202ENST00000358525 CAPZA3Q96KX2 299 aa16.54■□□□□ 0.24
SLC6A20-202ENST00000358525 LUC7L2Q9Y383 392 aaKnown RBP16.54■□□□□ 0.24
SLC6A20-202ENST00000358525 KRT86O43790 486 aa16.54■□□□□ 0.24
SLC6A20-202ENST00000358525 ADORA1P30542 326 aa16.54■□□□□ 0.24
SLC6A20-202ENST00000358525 CNGA4Q8IV77 575 aa16.54■□□□□ 0.24
SLC6A20-202ENST00000358525 DHX37Q8IY37 1157 aaKnown RBP16.54■□□□□ 0.24
SLC6A20-202ENST00000358525 VPS16Q9H269 839 aa16.54■□□□□ 0.24
SLC6A20-202ENST00000358525 CALCOCO1Q9P1Z2 691 aa16.54■□□□□ 0.24
SLC6A20-202ENST00000358525 ANKRD62A6NC57 917 aa16.54■□□□□ 0.24
SLC6A20-202ENST00000358525 TACC1O75410 805 aa16.54■□□□□ 0.24
SLC6A20-202ENST00000358525 A2ML1A8K2U0 1454 aa16.54■□□□□ 0.24
SLC6A20-202ENST00000358525 KIF5AQ12840 1032 aa16.54■□□□□ 0.24
SLC6A20-202ENST00000358525 CUL4AQ13619 759 aa16.54■□□□□ 0.24
SLC6A20-202ENST00000358525 ADALQ6DHV7 355 aa16.54■□□□□ 0.24
SLC6A20-202ENST00000358525 CMTR1Q8N1G2 835 aaKnown RBP16.54■□□□□ 0.24
SLC6A20-202ENST00000358525 PCCAP05165 728 aaPredicted RBP16.53■□□□□ 0.24
SLC6A20-202ENST00000358525 ERBB4Q15303 1308 aa16.53■□□□□ 0.24
SLC6A20-202ENST00000358525 ALKQ9UM73 1620 aa16.53■□□□□ 0.24
SLC6A20-202ENST00000358525 PNOCQ13519 176 aa16.53■□□□□ 0.24
SLC6A20-202ENST00000358525 MAATS1Q7Z4T9 603 aa16.53■□□□□ 0.24
SLC6A20-202ENST00000358525 DYDC1Q8WWB3 177 aa16.53■□□□□ 0.24
SLC6A20-202ENST00000358525 VPS54Q9P1Q0 977 aa16.53■□□□□ 0.24
SLC6A20-202ENST00000358525 LMTK3Q96Q04 1460 aa16.53■□□□□ 0.24
SLC6A20-202ENST00000358525 PDE6AP16499 860 aa16.53■□□□□ 0.24
SLC6A20-202ENST00000358525 ADD1P35611 737 aaKnown RBP16.53■□□□□ 0.24
SLC6A20-202ENST00000358525 ADGRB3O60242 1522 aa16.53■□□□□ 0.24
SLC6A20-202ENST00000358525 SYNRGQ9UMZ2 1314 aa16.53■□□□□ 0.24
SLC6A20-202ENST00000358525 SPDYE3A6NKU9 549 aa16.53■□□□□ 0.24
SLC6A20-202ENST00000358525 POLA2Q14181 598 aa16.53■□□□□ 0.24
SLC6A20-202ENST00000358525 POSTNQ15063 836 aa16.53■□□□□ 0.24
SLC6A20-202ENST00000358525 GPCPD1Q9NPB8 672 aa16.53■□□□□ 0.24
SLC6A20-202ENST00000358525 EIF6P56537 245 aaKnown RBP16.52■□□□□ 0.24
SLC6A20-202ENST00000358525 PPARAQ07869 468 aa16.52■□□□□ 0.24
SLC6A20-202ENST00000358525 PFKFB1P16118 471 aa16.52■□□□□ 0.24
SLC6A20-202ENST00000358525 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.52■□□□□ 0.24
SLC6A20-202ENST00000358525 CYP21A2P08686 494 aa16.52■□□□□ 0.24
SLC6A20-202ENST00000358525 PDIA3P30101 505 aaKnown RBP16.52■□□□□ 0.24
SLC6A20-202ENST00000358525 IFNL3Q8IZI9 196 aa16.52■□□□□ 0.24
SLC6A20-202ENST00000358525 MLKLQ8NB16 471 aa16.52■□□□□ 0.24
SLC6A20-202ENST00000358525 PI4K2BQ8TCG2 481 aa16.52■□□□□ 0.24
SLC6A20-202ENST00000358525 GREM2Q9H772 168 aa16.52■□□□□ 0.24
SLC6A20-202ENST00000358525 NFE2L3Q9Y4A8 694 aa16.52■□□□□ 0.24
SLC6A20-202ENST00000358525 RBM17Q96I25 401 aaKnown RBP16.52■□□□□ 0.23
SLC6A20-202ENST00000358525 RHOXF2BP0C7M4 288 aa16.52■□□□□ 0.23
SLC6A20-202ENST00000358525 IFI16Q16666 785 aaKnown RBP16.52■□□□□ 0.23
SLC6A20-202ENST00000358525 WDR78Q5VTH9 848 aa16.52■□□□□ 0.23
SLC6A20-202ENST00000358525 MYRIPQ8NFW9 859 aa16.52■□□□□ 0.23
SLC6A20-202ENST00000358525 NEK11Q8NG66 645 aa16.52■□□□□ 0.23
SLC6A20-202ENST00000358525 RHOXF2Q9BQY4 288 aa16.52■□□□□ 0.23
SLC6A20-202ENST00000358525 TMEM94Q12767 1356 aa16.51■□□□□ 0.23
SLC6A20-202ENST00000358525 GSTTP1A0A1W2PQM5 241 aa16.51■□□□□ 0.23
SLC6A20-202ENST00000358525 FAM47AQ5JRC9 791 aa16.51■□□□□ 0.23
SLC6A20-202ENST00000358525 SCLT1Q96NL6 688 aa16.51■□□□□ 0.23
SLC6A20-202ENST00000358525 GOLGA6L7A0A1B0GV03 622 aa16.51■□□□□ 0.23
SLC6A20-202ENST00000358525 GBP2P32456 591 aaPredicted RBP16.51■□□□□ 0.23
SLC6A20-202ENST00000358525 PLCD1P51178 756 aa16.51■□□□□ 0.23
SLC6A20-202ENST00000358525 TRMT44Q8IYL2 757 aaKnown RBP16.51■□□□□ 0.23
SLC6A20-202ENST00000358525 IMPACTQ9P2X3 320 aa16.51■□□□□ 0.23
SLC6A20-202ENST00000358525 CCNT1O60563 726 aaKnown RBP16.51■□□□□ 0.23
SLC6A20-202ENST00000358525 BCAMP50895 628 aa16.51■□□□□ 0.23
SLC6A20-202ENST00000358525 CHMP4BP1P59074 171 aa16.51■□□□□ 0.23
SLC6A20-202ENST00000358525 FAM98CQ17RN3 349 aaKnown RBP16.51■□□□□ 0.23
SLC6A20-202ENST00000358525 SV2BQ7L1I2 683 aa16.51■□□□□ 0.23
SLC6A20-202ENST00000358525 LARGE1O95461 756 aa16.51■□□□□ 0.23
SLC6A20-202ENST00000358525 ZNF654Q8IZM8 581 aa16.51■□□□□ 0.23
SLC6A20-202ENST00000358525 STAMQ92783 540 aa16.51■□□□□ 0.23
SLC6A20-202ENST00000358525 KIAA1468Q9P260 1216 aa16.51■□□□□ 0.23
SLC6A20-202ENST00000358525 ERBB3P21860 1342 aa16.5■□□□□ 0.23
SLC6A20-202ENST00000358525 LRRC7Q96NW7 1537 aa16.5■□□□□ 0.23
SLC6A20-202ENST00000358525 PDE4DQ08499 809 aa16.5■□□□□ 0.23
SLC6A20-202ENST00000358525 ZMYM1Q5SVZ6 1142 aa16.5■□□□□ 0.23
SLC6A20-202ENST00000358525 ERO1AQ96HE7 468 aa16.5■□□□□ 0.23
SLC6A20-202ENST00000358525 XPO4Q9C0E2 1151 aaKnown RBP16.5■□□□□ 0.23
SLC6A20-202ENST00000358525 CEP152O94986 1710 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms