RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, human

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNE2-204	ENST00000358025	GOLGA8B	A8MQT2	603 aa		4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	OAS2	P29728	719 aa	Known RBP	4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	MSL1	Q68DK7	614 aa		4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	CSRNP2	Q9H175	543 aa		4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	DEUP1	Q05D60	604 aa		4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	HOMER3	Q9NSC5	361 aa		4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	PATL2	C9JE40	543 aa	Known RBP	4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	TBC1D31	Q96DN5	1066 aa		4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	LSG1	Q9H089	658 aa	Known RBP	4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	SIL1	Q9H173	461 aa		4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	MARCH6	O60337	910 aa		4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	SAMD9L	Q8IVG5	1584 aa		4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	CSB-PGBD3	P0DP91	1061 aa		4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	MPND	Q8N594	471 aa		4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	MRGBP	Q9NV56	204 aa		4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	SUN1	O94901	812 aa		4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	LMOD1	P29536	600 aa	Predicted RBP	4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	ERCC6L	Q2NKX8	1250 aa		4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	MAIP1	Q8WWC4	291 aa		4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	CCDC28B	Q9BUN5	200 aa		4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	MTUS1	Q9ULD2	1270 aa		4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	DNAJC8	O75937	253 aa	Predicted RBP	4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	EIF2S2	P20042	333 aa	Known RBP	4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	NOC2L	Q9Y3T9	749 aa	Known RBP	4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	CCDC110	Q8TBZ0	833 aa		4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	MAN1A1	P33908	653 aa		4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	IGSF22	Q8N9C0	903 aa		4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	ALG1	Q9BT22	464 aa		4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	PARD6B	Q9BYG5	372 aa		4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	FAN1	Q9Y2M0	1017 aa		4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	POTEJ	P0CG39	1038 aa		4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	USP37	Q86T82	979 aa		4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	SPATS2L	Q9NUQ6	558 aa	Known RBP	4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	THEG	Q9P2T0	379 aa		4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	KIAA1210	Q9ULL0	1709 aa		4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	SIRT2	Q8IXJ6	389 aa		4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	THEMIS	Q8N1K5	641 aa	Predicted RBP	4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	GDPD2	Q9HCC8	539 aa		4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	KRT18	P05783	430 aa	Known RBP	4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	SNRPA1	P09661	255 aa	Known RBP	4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	CEBPZ	Q03701	1054 aa	Known RBP	4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	ANKLE2	Q86XL3	938 aa		4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	MICALL1	Q8N3F8	863 aa		4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	C1orf115	Q9H7X2	142 aa		4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	FAM184B	Q9ULE4	1060 aa		4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025		G3V3G9	751 aa		4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	DCAF8	Q5TAQ9	597 aa		4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	PHLDB3	Q6NSJ2	640 aa		4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	CRELD2	Q6UXH1	353 aa	Predicted RBP	4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	GPATCH11	Q8N954	259 aa		4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	KCNG1	Q9UIX4	513 aa		4.61	□□□□□ -1.67
SYNE2-204	ENST00000358025	PRC1	O43663	620 aa		4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	ITIH6	Q6UXX5	1313 aa		4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	MAST1	Q9Y2H9	1570 aa		4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	BRF1	Q92994	677 aa		4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	HOOK2	Q96ED9	719 aa		4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	NBPF3	Q9H094	633 aa		4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	ABCC12	Q96J65	1359 aa		4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	EPHB4	P54760	987 aa		4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	RAD51AP2	Q09MP3	1159 aa		4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	ORC2	Q13416	577 aa	Predicted RBP	4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	OSCAR	Q8IYS5	282 aa		4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	URB2	Q14146	1524 aa	Known RBP	4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	ALX1	Q15699	326 aa		4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	SPTY2D1	Q68D10	685 aa	Predicted RBP	4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	TMEM132E	Q6IEE7	984 aa		4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	KCTD17	Q8N5Z5	321 aa		4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	PIP4K2C	Q8TBX8	421 aa		4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	TSC1	Q92574	1164 aa		4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	PBK	Q96KB5	322 aa		4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	MAP7	Q14244	749 aa		4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	LONRF2	Q1L5Z9	754 aa		4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	CDC5L	Q99459	802 aa	Known RBP	4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	MXD3	Q9BW11	206 aa		4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	ENO4	A6NNW6	628 aa		4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	NECTIN2	Q92692	538 aa		4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	CIAO1	O76071	339 aa		4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	NBPF20	Q3BBV1	942 aa		4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	SPDYC	Q5MJ68	293 aa		4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	FBXO38	Q6PIJ6	1188 aa		4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	DHTKD1	Q96HY7	919 aa	Predicted RBP	4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	PHACTR1	Q9C0D0	580 aa		4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	DDX21	Q9NR30	783 aa	Known RBP eCLIP	4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	BTBD11	A6QL63	1104 aa		4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	CDK17	Q00537	523 aa		4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	SNCB	Q16143	134 aa		4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	POTEF	A5A3E0	1075 aa		4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	POTEI	P0CG38	1075 aa		4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	FOXR2	Q6PJQ5	311 aa		4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	POTEE	Q6S8J3	1075 aa		4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	ANKRD13D	Q6ZTN6	518 aa		4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	SLF2	Q8IX21	1173 aa		4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	ZC3H15	Q8WU90	426 aa	Known RBP	4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	NLRP6	P59044	892 aa		4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	UBXN1	Q04323	297 aa		4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	IDI1	Q13907	227 aa		4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	PPP1R2P3	Q6NXS1	205 aa		4.6	□□□□□ -1.67
SYNE2-204	ENST00000358025	TBC1D5	Q92609	795 aa		4.6	□□□□□ -1.67

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