RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 BRF1Q92994 677 aa17.88■□□□□ 0.45
RTN3-205ENST00000356000 SAAL1Q96ER3 474 aa17.88■□□□□ 0.45
RTN3-205ENST00000356000 SLC40A1Q9NP59 571 aa17.88■□□□□ 0.45
RTN3-205ENST00000356000 BATF3Q9NR55 127 aa17.88■□□□□ 0.45
RTN3-205ENST00000356000 TRPC5Q9UL62 973 aaPredicted RBP17.88■□□□□ 0.45
RTN3-205ENST00000356000 PXDNQ92626 1479 aa17.88■□□□□ 0.45
RTN3-205ENST00000356000 MYH15Q9Y2K3 1946 aa17.88■□□□□ 0.45
RTN3-205ENST00000356000 DLC1Q96QB1 1528 aa17.88■□□□□ 0.45
RTN3-205ENST00000356000 WHAMMP3Q1A5X7 153 aa17.87■□□□□ 0.45
RTN3-205ENST00000356000 CFAP100Q494V2 611 aa17.87■□□□□ 0.45
RTN3-205ENST00000356000 MICALCLQ6ZW33 695 aa17.87■□□□□ 0.45
RTN3-205ENST00000356000 KIAA1328Q86T90 577 aa17.87■□□□□ 0.45
RTN3-205ENST00000356000 FAM228AQ86W67 206 aa17.87■□□□□ 0.45
RTN3-205ENST00000356000 KLHL23Q8NBE8 558 aa17.87■□□□□ 0.45
RTN3-205ENST00000356000 ALDH8A1Q9H2A2 487 aaPredicted RBP17.87■□□□□ 0.45
RTN3-205ENST00000356000 RABEP2Q9H5N1 569 aa17.87■□□□□ 0.45
RTN3-205ENST00000356000 A6NNZ2 444 aa17.87■□□□□ 0.45
RTN3-205ENST00000356000 SERPINC1P01008 464 aa17.87■□□□□ 0.45
RTN3-205ENST00000356000 IBSPP21815 317 aaPredicted RBP17.87■□□□□ 0.45
RTN3-205ENST00000356000 ATP8B2P98198 1209 aa17.87■□□□□ 0.45
RTN3-205ENST00000356000 TBC1D25Q3MII6 688 aa17.87■□□□□ 0.45
RTN3-205ENST00000356000 TUBB8Q3ZCM7 444 aa17.87■□□□□ 0.45
RTN3-205ENST00000356000 KIRREL3Q8IZU9 778 aa17.87■□□□□ 0.45
RTN3-205ENST00000356000 DDX54Q8TDD1 881 aaKnown RBP17.87■□□□□ 0.45
RTN3-205ENST00000356000 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.87■□□□□ 0.45
RTN3-205ENST00000356000 PNMA6EA0A0J9YXQ4 647 aa17.86■□□□□ 0.45
RTN3-205ENST00000356000 ZKSCAN1P17029 563 aaPredicted RBP17.86■□□□□ 0.45
RTN3-205ENST00000356000 CDR1P51861 262 aa17.86■□□□□ 0.45
RTN3-205ENST00000356000 DRAXINQ8NBI3 349 aaPredicted RBP17.86■□□□□ 0.45
RTN3-205ENST00000356000 SPDL1Q96EA4 605 aa17.86■□□□□ 0.45
RTN3-205ENST00000356000 TMEM232C9JQI7 657 aa17.86■□□□□ 0.45
RTN3-205ENST00000356000 NDUFAB1O14561 156 aa17.86■□□□□ 0.45
RTN3-205ENST00000356000 RAB27AP51159 221 aa17.86■□□□□ 0.45
RTN3-205ENST00000356000 TTLL7Q6ZT98 887 aa17.86■□□□□ 0.45
RTN3-205ENST00000356000 PARP9Q8IXQ6 854 aa17.86■□□□□ 0.45
RTN3-205ENST00000356000 CCDC13Q8IYE1 715 aa17.86■□□□□ 0.45
RTN3-205ENST00000356000 NOA1Q8NC60 698 aaKnown RBP17.86■□□□□ 0.45
RTN3-205ENST00000356000 ZBTB10Q96DT7 871 aa17.86■□□□□ 0.45
RTN3-205ENST00000356000 CENPHQ9H3R5 247 aa17.86■□□□□ 0.45
RTN3-205ENST00000356000 NEDD4P46934 1319 aa17.86■□□□□ 0.45
RTN3-205ENST00000356000 CCDC175P0C221 793 aa17.85■□□□□ 0.45
RTN3-205ENST00000356000 MCM3P25205 808 aa17.85■□□□□ 0.45
RTN3-205ENST00000356000 CCT4P50991 539 aaKnown RBP17.85■□□□□ 0.45
RTN3-205ENST00000356000 TC2NQ8N9U0 490 aa17.85■□□□□ 0.45
RTN3-205ENST00000356000 DESI2Q9BSY9 194 aa17.85■□□□□ 0.45
RTN3-205ENST00000356000 H3BQV1 296 aa17.85■□□□□ 0.45
RTN3-205ENST00000356000 KIF5CO60282 957 aa17.85■□□□□ 0.45
RTN3-205ENST00000356000 PDHBP11177 359 aa17.85■□□□□ 0.45
RTN3-205ENST00000356000 PSMD2Q13200 908 aa17.85■□□□□ 0.45
RTN3-205ENST00000356000 IFFO2Q5TF58 517 aa17.85■□□□□ 0.45
RTN3-205ENST00000356000 ATL3Q6DD88 541 aa17.85■□□□□ 0.45
RTN3-205ENST00000356000 MRPS27Q92552 414 aaKnown RBP17.85■□□□□ 0.45
RTN3-205ENST00000356000 FTOQ9C0B1 505 aaKnown RBP eCLIP17.85■□□□□ 0.45
RTN3-205ENST00000356000 PSMA5P28066 241 aa17.85■□□□□ 0.45
RTN3-205ENST00000356000 OR8K1Q8NGG5 319 aa17.85■□□□□ 0.45
RTN3-205ENST00000356000 LMBR1Q8WVP7 490 aa17.85■□□□□ 0.45
RTN3-205ENST00000356000 CRACR2AQ9BSW2 395 aa17.85■□□□□ 0.45
RTN3-205ENST00000356000 CRYBG1Q9Y4K1 1723 aa17.84■□□□□ 0.45
RTN3-205ENST00000356000 NEFHP12036 1026 aa17.84■□□□□ 0.45
RTN3-205ENST00000356000 SLC8A1P32418 973 aa17.84■□□□□ 0.45
RTN3-205ENST00000356000 GBP2P32456 591 aaPredicted RBP17.84■□□□□ 0.45
RTN3-205ENST00000356000 SKOR1P84550 965 aa17.84■□□□□ 0.45
RTN3-205ENST00000356000 TCP11Q8WWU5 503 aa17.84■□□□□ 0.45
RTN3-205ENST00000356000 RUFY2Q8WXA3 655 aa17.84■□□□□ 0.45
RTN3-205ENST00000356000 QTRT2Q9H974 415 aaKnown RBP17.84■□□□□ 0.45
RTN3-205ENST00000356000 MYO6Q9UM54 1294 aa17.84■□□□□ 0.45
RTN3-205ENST00000356000 A0A1W2PP64 1363 aa17.84■□□□□ 0.45
RTN3-205ENST00000356000 CTAGE9A4FU28 777 aa17.84■□□□□ 0.45
RTN3-205ENST00000356000 FYB1O15117 783 aa17.84■□□□□ 0.45
RTN3-205ENST00000356000 MYO1BO43795 1136 aa17.84■□□□□ 0.45
RTN3-205ENST00000356000 DRP2Q13474 957 aa17.84■□□□□ 0.45
RTN3-205ENST00000356000 MTX1Q13505 466 aa17.84■□□□□ 0.45
RTN3-205ENST00000356000 SNX1Q13596 522 aa17.84■□□□□ 0.45
RTN3-205ENST00000356000 ARHGEF25Q86VW2 580 aa17.84■□□□□ 0.45
RTN3-205ENST00000356000 USP28Q96RU2 1077 aa17.84■□□□□ 0.45
RTN3-205ENST00000356000 JAK2O60674 1132 aa17.83■□□□□ 0.44
RTN3-205ENST00000356000 MTA1Q13330 715 aa17.83■□□□□ 0.44
RTN3-205ENST00000356000 TOB2Q14106 344 aaPredicted RBP17.83■□□□□ 0.44
RTN3-205ENST00000356000 CCDC148Q8NFR7 591 aa17.83■□□□□ 0.44
RTN3-205ENST00000356000 SPDYE1Q8NFV5 336 aaPredicted RBP17.83■□□□□ 0.44
RTN3-205ENST00000356000 FANCLQ9NW38 375 aa17.83■□□□□ 0.44
RTN3-205ENST00000356000 ANKARQ7Z5J8 1434 aa17.83■□□□□ 0.44
RTN3-205ENST00000356000 ZEB2O60315 1214 aa17.83■□□□□ 0.44
RTN3-205ENST00000356000 TFRCP02786 760 aaKnown RBP17.83■□□□□ 0.44
RTN3-205ENST00000356000 PEX19P40855 299 aa17.83■□□□□ 0.44
RTN3-205ENST00000356000 KCNB1Q14721 858 aa17.83■□□□□ 0.44
RTN3-205ENST00000356000 CREB3L3Q68CJ9 461 aa17.83■□□□□ 0.44
RTN3-205ENST00000356000 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.83■□□□□ 0.44
RTN3-205ENST00000356000 HOOK2Q96ED9 719 aa17.83■□□□□ 0.44
RTN3-205ENST00000356000 RSRC1Q96IZ7 334 aaKnown RBP17.83■□□□□ 0.44
RTN3-205ENST00000356000 LZTFL1Q9NQ48 299 aa17.83■□□□□ 0.44
RTN3-205ENST00000356000 ABCC6O95255 1503 aa17.82■□□□□ 0.44
RTN3-205ENST00000356000 TULP4Q9NRJ4 1543 aa17.82■□□□□ 0.44
RTN3-205ENST00000356000 CD163L1Q9NR16 1453 aa17.82■□□□□ 0.44
RTN3-205ENST00000356000 DLG5Q8TDM6 1919 aa17.82■□□□□ 0.44
RTN3-205ENST00000356000 NUTM2BA6NNL0 878 aaPredicted RBP17.82■□□□□ 0.44
RTN3-205ENST00000356000 NUTM2EB1AL46 878 aaPredicted RBP17.82■□□□□ 0.44
RTN3-205ENST00000356000 BIN1O00499 593 aa17.82■□□□□ 0.44
RTN3-205ENST00000356000 ME1P48163 572 aa17.82■□□□□ 0.44
RTN3-205ENST00000356000 USP14P54578 494 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms