RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 FOXD4L4Q8WXT5 416 aaPredicted RBP26.84■■□□□ 1.89
SCAMP3-202ENST00000355379 USP17L12C9JPN9 530 aa26.83■■□□□ 1.89
SCAMP3-202ENST00000355379 USP17L21D6R901 530 aa26.83■■□□□ 1.89
SCAMP3-202ENST00000355379 CTDNEP1O95476 244 aa26.83■■□□□ 1.89
SCAMP3-202ENST00000355379 NT5C2P49902 561 aa26.83■■□□□ 1.89
SCAMP3-202ENST00000355379 CCT2P78371 535 aaKnown RBP26.83■■□□□ 1.89
SCAMP3-202ENST00000355379 PODNQ7Z5L7 613 aa26.83■■□□□ 1.89
SCAMP3-202ENST00000355379 LY9Q9HBG7 655 aa26.83■■□□□ 1.89
SCAMP3-202ENST00000355379 MKRN1Q9UHC7 482 aaKnown RBP26.83■■□□□ 1.89
SCAMP3-202ENST00000355379 NAP1L2Q9ULW6 460 aaPredicted RBP26.83■■□□□ 1.89
SCAMP3-202ENST00000355379 HPS5Q9UPZ3 1129 aa26.83■■□□□ 1.89
SCAMP3-202ENST00000355379 KIF3AQ9Y496 699 aa26.83■■□□□ 1.89
SCAMP3-202ENST00000355379 ATP6V1DQ9Y5K8 247 aa26.83■■□□□ 1.89
SCAMP3-202ENST00000355379 FOCADQ5VW36 1801 aa26.82■■□□□ 1.88
SCAMP3-202ENST00000355379 G3V3G9 751 aa26.82■■□□□ 1.88
SCAMP3-202ENST00000355379 JAK2O60674 1132 aa26.82■■□□□ 1.88
SCAMP3-202ENST00000355379 PLCG2P16885 1265 aa26.82■■□□□ 1.88
SCAMP3-202ENST00000355379 TMEM67Q5HYA8 995 aa26.82■■□□□ 1.88
SCAMP3-202ENST00000355379 DCAF8Q5TAQ9 597 aa26.82■■□□□ 1.88
SCAMP3-202ENST00000355379 SH3RF3Q8TEJ3 882 aaPredicted RBP26.82■■□□□ 1.88
SCAMP3-202ENST00000355379 ESR2Q92731 530 aa26.82■■□□□ 1.88
SCAMP3-202ENST00000355379 GOLGA8BA8MQT2 603 aa26.81■■□□□ 1.88
SCAMP3-202ENST00000355379 IFIT3O14879 490 aaKnown RBP26.81■■□□□ 1.88
SCAMP3-202ENST00000355379 SLC3A2P08195 630 aaKnown RBP26.81■■□□□ 1.88
SCAMP3-202ENST00000355379 SART3Q15020 963 aaKnown RBP26.81■■□□□ 1.88
SCAMP3-202ENST00000355379 SUPT20HQ8NEM7 779 aa26.81■■□□□ 1.88
SCAMP3-202ENST00000355379 ZNF646O15015 1829 aaPredicted RBP26.81■■□□□ 1.88
SCAMP3-202ENST00000355379 ORC4O43929 436 aa26.8■■□□□ 1.88
SCAMP3-202ENST00000355379 USP5P45974 858 aa26.8■■□□□ 1.88
SCAMP3-202ENST00000355379 FKBP1AP62942 108 aaKnown RBP26.8■■□□□ 1.88
SCAMP3-202ENST00000355379 DOK7Q18PE1 504 aa26.8■■□□□ 1.88
SCAMP3-202ENST00000355379 RRP12Q5JTH9 1297 aaKnown RBP26.8■■□□□ 1.88
SCAMP3-202ENST00000355379 TMTC2Q8N394 836 aa26.8■■□□□ 1.88
SCAMP3-202ENST00000355379 TOMM22Q9NS69 142 aa26.8■■□□□ 1.88
SCAMP3-202ENST00000355379 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.8■■□□□ 1.88
SCAMP3-202ENST00000355379 PTPDC1A2A3K4 754 aa26.8■■□□□ 1.88
SCAMP3-202ENST00000355379 BTDP43251 543 aa26.8■■□□□ 1.88
SCAMP3-202ENST00000355379 FAM184AQ8NB25 1140 aa26.8■■□□□ 1.88
SCAMP3-202ENST00000355379 NCOA5Q9HCD5 579 aaKnown RBP26.8■■□□□ 1.88
SCAMP3-202ENST00000355379 LMBRD1Q9NUN5 540 aa26.8■■□□□ 1.88
SCAMP3-202ENST00000355379 DDX60LQ5H9U9 1706 aaKnown RBP26.79■■□□□ 1.88
SCAMP3-202ENST00000355379 CYP2D7A0A087X1C5 515 aa26.79■■□□□ 1.88
SCAMP3-202ENST00000355379 APOA5Q6Q788 366 aa26.79■■□□□ 1.88
SCAMP3-202ENST00000355379 NID2Q14112 1375 aa26.79■■□□□ 1.88
SCAMP3-202ENST00000355379 TCHHQ07283 1943 aa26.78■■□□□ 1.88
SCAMP3-202ENST00000355379 ERICH2A1L162 156 aa26.78■■□□□ 1.88
SCAMP3-202ENST00000355379 VPS37CA5D8V6 355 aaPredicted RBP26.78■■□□□ 1.88
SCAMP3-202ENST00000355379 TTLL6Q8N841 843 aa26.78■■□□□ 1.88
SCAMP3-202ENST00000355379 DTNBO60941 627 aa26.77■■□□□ 1.88
SCAMP3-202ENST00000355379 WTAPQ15007 396 aa26.77■■□□□ 1.88
SCAMP3-202ENST00000355379 C12orf60Q5U649 245 aa26.77■■□□□ 1.88
SCAMP3-202ENST00000355379 MCM9Q9NXL9 1143 aa26.77■■□□□ 1.88
SCAMP3-202ENST00000355379 ROBO3Q96MS0 1386 aa26.77■■□□□ 1.88
SCAMP3-202ENST00000355379 CCDC69A6NI79 296 aa26.76■■□□□ 1.87
SCAMP3-202ENST00000355379 RCAN1P53805 252 aa26.76■■□□□ 1.87
SCAMP3-202ENST00000355379 NFXL1Q6ZNB6 911 aa26.76■■□□□ 1.87
SCAMP3-202ENST00000355379 AMOTL1Q8IY63 956 aa26.76■■□□□ 1.87
SCAMP3-202ENST00000355379 CERS5Q8N5B7 392 aa26.76■■□□□ 1.87
SCAMP3-202ENST00000355379 ZBTB43O43298 467 aa26.75■■□□□ 1.87
SCAMP3-202ENST00000355379 RGS22Q8NE09 1264 aa26.75■■□□□ 1.87
SCAMP3-202ENST00000355379 FBXW7Q969H0 707 aa26.75■■□□□ 1.87
SCAMP3-202ENST00000355379 DDX11Q96FC9 970 aa26.75■■□□□ 1.87
SCAMP3-202ENST00000355379 UBAC1Q9BSL1 405 aa26.75■■□□□ 1.87
SCAMP3-202ENST00000355379 MYH1P12882 1939 aa26.75■■□□□ 1.87
SCAMP3-202ENST00000355379 PSME4Q14997 1843 aa26.75■■□□□ 1.87
SCAMP3-202ENST00000355379 SMIM22K7EJ46 135 aa26.75■■□□□ 1.87
SCAMP3-202ENST00000355379 METAP2P50579 478 aaKnown RBP eCLIP26.75■■□□□ 1.87
SCAMP3-202ENST00000355379 RHBDL3P58872 404 aa26.75■■□□□ 1.87
SCAMP3-202ENST00000355379 PDE4BQ07343 736 aa26.75■■□□□ 1.87
SCAMP3-202ENST00000355379 KIAA2012Q0VF49 1180 aa26.75■■□□□ 1.87
SCAMP3-202ENST00000355379 STRIP1Q5VSL9 837 aa26.75■■□□□ 1.87
SCAMP3-202ENST00000355379 SYNE3Q6ZMZ3 975 aa26.75■■□□□ 1.87
SCAMP3-202ENST00000355379 STK11IPQ8N1F8 1099 aa26.75■■□□□ 1.87
SCAMP3-202ENST00000355379 TGFBRAP1Q8WUH2 860 aa26.75■■□□□ 1.87
SCAMP3-202ENST00000355379 SENP2Q9HC62 589 aa26.75■■□□□ 1.87
SCAMP3-202ENST00000355379 ZNF219Q9P2Y4 722 aaPredicted RBP26.75■■□□□ 1.87
SCAMP3-202ENST00000355379 DAGLAQ9Y4D2 1042 aa26.75■■□□□ 1.87
SCAMP3-202ENST00000355379 SCN9AQ15858 1988 aa26.74■■□□□ 1.87
SCAMP3-202ENST00000355379 USP17L8P0C7I0 530 aa26.74■■□□□ 1.87
SCAMP3-202ENST00000355379 KCNA3P22001 575 aa26.74■■□□□ 1.87
SCAMP3-202ENST00000355379 GSE1Q14687 1217 aa26.74■■□□□ 1.87
SCAMP3-202ENST00000355379 SEC23AQ15436 765 aa26.74■■□□□ 1.87
SCAMP3-202ENST00000355379 CCDC93Q567U6 631 aa26.74■■□□□ 1.87
SCAMP3-202ENST00000355379 CDC37L1Q7L3B6 337 aa26.74■■□□□ 1.87
SCAMP3-202ENST00000355379 TEX11Q8IYF3 940 aa26.74■■□□□ 1.87
SCAMP3-202ENST00000355379 DBNDD1Q9H9R9 158 aa26.74■■□□□ 1.87
SCAMP3-202ENST00000355379 SLC12A7Q9Y666 1083 aa26.74■■□□□ 1.87
SCAMP3-202ENST00000355379 CPLX1O14810 134 aa26.73■■□□□ 1.87
SCAMP3-202ENST00000355379 ECE2O60344 883 aa26.73■■□□□ 1.87
SCAMP3-202ENST00000355379 CDKL5O76039 1030 aa26.73■■□□□ 1.87
SCAMP3-202ENST00000355379 CYP2D6P10635 497 aa26.73■■□□□ 1.87
SCAMP3-202ENST00000355379 DPEP1P16444 411 aa26.73■■□□□ 1.87
SCAMP3-202ENST00000355379 CPLX2Q6PUV4 134 aaKnown RBP26.73■■□□□ 1.87
SCAMP3-202ENST00000355379 HHIPL2Q6UWX4 724 aa26.73■■□□□ 1.87
SCAMP3-202ENST00000355379 RTKN2Q8IZC4 609 aa26.73■■□□□ 1.87
SCAMP3-202ENST00000355379 TMEM87AQ8NBN3 555 aa26.73■■□□□ 1.87
SCAMP3-202ENST00000355379 MRIQ9BWK5 157 aa26.73■■□□□ 1.87
SCAMP3-202ENST00000355379 TTF2Q9UNY4 1162 aaKnown RBP26.73■■□□□ 1.87
SCAMP3-202ENST00000355379 ECM29Q5VYK3 1845 aa26.72■■□□□ 1.87
SCAMP3-202ENST00000355379 PRPF40AO75400 957 aaKnown RBP26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms