RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 CHRNA2Q15822 529 aa6.44□□□□□ -1.38
SRGAP1-201ENST00000355086 CARD10Q9BWT7 1032 aa6.44□□□□□ -1.38
SRGAP1-201ENST00000355086 SAP30BPQ9UHR5 308 aaKnown RBP6.44□□□□□ -1.38
SRGAP1-201ENST00000355086 C10orf67Q8IYJ2 551 aa6.44□□□□□ -1.38
SRGAP1-201ENST00000355086 VCX3AQ9NNX9 186 aa6.44□□□□□ -1.38
SRGAP1-201ENST00000355086 INPP1P49441 399 aa6.44□□□□□ -1.38
SRGAP1-201ENST00000355086 TRIM14Q14142 442 aa6.44□□□□□ -1.38
SRGAP1-201ENST00000355086 NAPGQ99747 312 aaPredicted RBP6.44□□□□□ -1.38
SRGAP1-201ENST00000355086 EP400NLQ6ZTU2 488 aa6.44□□□□□ -1.38
SRGAP1-201ENST00000355086 COPS6Q7L5N1 327 aa6.44□□□□□ -1.38
SRGAP1-201ENST00000355086 TBC1D8BQ0IIM8 1120 aa6.44□□□□□ -1.38
SRGAP1-201ENST00000355086 ESYT1Q9BSJ8 1104 aa6.44□□□□□ -1.38
SRGAP1-201ENST00000355086 ANKRD2Q9GZV1 360 aa6.44□□□□□ -1.38
SRGAP1-201ENST00000355086 TBC1D8O95759 1140 aa6.44□□□□□ -1.38
SRGAP1-201ENST00000355086 BRAPQ7Z569 592 aa6.44□□□□□ -1.38
SRGAP1-201ENST00000355086 CADPS2Q86UW7 1296 aa6.44□□□□□ -1.38
SRGAP1-201ENST00000355086 TBC1D32Q96NH3 1257 aa6.44□□□□□ -1.38
SRGAP1-201ENST00000355086 ZNF174Q15697 407 aa6.44□□□□□ -1.38
SRGAP1-201ENST00000355086 C8orf37Q96NL8 207 aa6.44□□□□□ -1.38
SRGAP1-201ENST00000355086 P4HA1P13674 534 aa6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 BAG1Q99933 345 aaPredicted RBP6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 CCDC141Q6ZP82 1450 aa6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 NBPF14Q5TI25 921 aa6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 TPTE2Q6XPS3 522 aa6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 KRT3P12035 628 aa6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 FGD5Q6ZNL6 1462 aa6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 CLNS1AP54105 237 aaKnown RBP6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 GPCPD1Q9NPB8 672 aa6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 MYCLP12524 364 aaPredicted RBP6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 IGSF22Q8N9C0 903 aa6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 OATP04181 439 aa6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 TRIM31Q9BZY9 425 aa6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 AZI2Q9H6S1 392 aa6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 SEPT10Q9P0V9 454 aa6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 CASKIN1Q8WXD9 1431 aa6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 NDUFAB1O14561 156 aa6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 KRT19P08727 400 aa6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 IFT20Q8IY31 132 aa6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 IGF1RP08069 1367 aa6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 PLCD1P51178 756 aa6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 LRRC43Q8N309 656 aa6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 HAUS8Q9BT25 410 aa6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 IRX3P78415 501 aaPredicted RBP6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 NOP9Q86U38 636 aaKnown RBP6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 ELP1O95163 1332 aa6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 RBBP5Q15291 538 aaKnown RBP6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 TEX11Q8IYF3 940 aa6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 RBM17Q96I25 401 aaKnown RBP6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 BSPRYQ5W0U4 402 aa6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 C4orf50Q6ZRC1 276 aa6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 VSIG1Q86XK7 387 aa6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 ZRANB1Q9UGI0 708 aa6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 PRG4Q92954 1404 aaPredicted RBP6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 ATP6V1E1P36543 226 aa6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 TTC6Q86TZ1 520 aa6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 DZIP3Q86Y13 1208 aaKnown RBP6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 RBSNQ9H1K0 784 aa6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 ERICH3Q5RHP9 1530 aa6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 APOBRQ0VD83 1088 aa6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 MBIPQ9NS73 344 aa6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 ATAD2BQ9ULI0 1458 aa6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 KRBA2Q6ZNG9 492 aa6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 MED10Q9BTT4 135 aa6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 C8orf74Q6P047 294 aa6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 LMBR1LQ6UX01 489 aa6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 RXRAP19793 462 aa6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 PDE4DQ08499 809 aa6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 EPRSP07814 1512 aaKnown RBP6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 PTPDC1A2A3K4 754 aa6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 CFTRP13569 1480 aa6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 TMTC4Q5T4D3 741 aa6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 SKAP1Q86WV1 359 aa6.43□□□□□ -1.38
SRGAP1-201ENST00000355086 ESYT2A0FGR8 921 aa6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 CYP26C1Q6V0L0 522 aa6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 KRT15P19012 456 aa6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 KRT81Q14533 505 aa6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 DNM2P50570 870 aa6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 DENND2CQ68D51 928 aa6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 PLCB1Q9NQ66 1216 aa6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 BCAP29Q9UHQ4 241 aa6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 AQRO60306 1485 aaKnown RBP eCLIP6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 NUCB1Q02818 461 aa6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 C11orf95C9JLR9 678 aaPredicted RBP6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 NXNQ6DKJ4 435 aa6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 NCAPH2Q6IBW4 605 aa6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 GCNT3O95395 438 aa6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 VPS16Q9H269 839 aa6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 TSPYL2Q9H2G4 693 aaPredicted RBP6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 RUFY4Q6ZNE9 571 aa6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 SMIM24O75264 130 aa6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 NMIQ13287 307 aaPredicted RBP6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 SLC39A6Q13433 755 aa6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 TUBB2AQ13885 445 aa6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 TUBB2BQ9BVA1 445 aa6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 DDX39AO00148 427 aaKnown RBP6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 CCDC105Q8IYK2 499 aa6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 DDX21Q9NR30 783 aaKnown RBP eCLIP6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 FAM83GA6ND36 823 aa6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 KIF11P52732 1056 aa6.42□□□□□ -1.38
SRGAP1-201ENST00000355086 RNF10Q8N5U6 811 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms