RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 EPB41L4AQ9HCS5 686 aaPredicted RBP17.88■□□□□ 0.45
TNFSF13-202ENST00000349228 FAM217BQ9NTX9 383 aaPredicted RBP17.88■□□□□ 0.45
TNFSF13-202ENST00000349228 TUBE1Q9UJT0 475 aa17.88■□□□□ 0.45
TNFSF13-202ENST00000349228 RIOK3O14730 519 aaKnown RBP17.88■□□□□ 0.45
TNFSF13-202ENST00000349228 CTIFO43310 598 aaKnown RBP17.88■□□□□ 0.45
TNFSF13-202ENST00000349228 TPD52L1Q16890 204 aaPredicted RBP17.88■□□□□ 0.45
TNFSF13-202ENST00000349228 TRIM22Q8IYM9 498 aa17.88■□□□□ 0.45
TNFSF13-202ENST00000349228 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.88■□□□□ 0.45
TNFSF13-202ENST00000349228 TIAM2Q8IVF5 1701 aa17.87■□□□□ 0.45
TNFSF13-202ENST00000349228 ERICH2A1L162 156 aa17.87■□□□□ 0.45
TNFSF13-202ENST00000349228 CAMTA2O94983 1202 aa17.87■□□□□ 0.45
TNFSF13-202ENST00000349228 TNNT1P13805 278 aa17.87■□□□□ 0.45
TNFSF13-202ENST00000349228 CRKLP46109 303 aaKnown RBP17.87■□□□□ 0.45
TNFSF13-202ENST00000349228 RESP18Q5W5W9 173 aa17.87■□□□□ 0.45
TNFSF13-202ENST00000349228 MAP3K14Q99558 947 aa17.87■□□□□ 0.45
TNFSF13-202ENST00000349228 COL22A1Q8NFW1 1626 aaPredicted RBP17.86■□□□□ 0.45
TNFSF13-202ENST00000349228 WDHD1O75717 1129 aaPredicted RBP17.86■□□□□ 0.45
TNFSF13-202ENST00000349228 SKILP12757 684 aa17.86■□□□□ 0.45
TNFSF13-202ENST00000349228 DPCR1Q3MIW9 517 aa17.86■□□□□ 0.45
TNFSF13-202ENST00000349228 CCDC150Q8NCX0 1101 aa17.86■□□□□ 0.45
TNFSF13-202ENST00000349228 ARMT1Q9H993 441 aa17.86■□□□□ 0.45
TNFSF13-202ENST00000349228 GJB4Q9NTQ9 266 aa17.86■□□□□ 0.45
TNFSF13-202ENST00000349228 HOOK1Q9UJC3 728 aaKnown RBP17.86■□□□□ 0.45
TNFSF13-202ENST00000349228 DENND2AQ9ULE3 1009 aa17.86■□□□□ 0.45
TNFSF13-202ENST00000349228 ZNF652Q9Y2D9 606 aa17.86■□□□□ 0.45
TNFSF13-202ENST00000349228 KIF2AO00139 706 aaPredicted RBP17.86■□□□□ 0.45
TNFSF13-202ENST00000349228 NRDCO43847 1150 aa17.86■□□□□ 0.45
TNFSF13-202ENST00000349228 ATP6V1AP38606 617 aa17.86■□□□□ 0.45
TNFSF13-202ENST00000349228 TDO2P48775 406 aa17.86■□□□□ 0.45
TNFSF13-202ENST00000349228 PHKBQ93100 1093 aa17.86■□□□□ 0.45
TNFSF13-202ENST00000349228 ZMYND15Q9H091 742 aa17.86■□□□□ 0.45
TNFSF13-202ENST00000349228 GNL3LQ9NVN8 582 aaKnown RBP17.86■□□□□ 0.45
TNFSF13-202ENST00000349228 SLC4A4Q9Y6R1 1079 aa17.86■□□□□ 0.45
TNFSF13-202ENST00000349228 DOCK2Q92608 1830 aa17.85■□□□□ 0.45
TNFSF13-202ENST00000349228 KCNJ6P48051 423 aa17.85■□□□□ 0.45
TNFSF13-202ENST00000349228 WTAPQ15007 396 aa17.85■□□□□ 0.45
TNFSF13-202ENST00000349228 AIFM3Q96NN9 605 aa17.85■□□□□ 0.45
TNFSF13-202ENST00000349228 FOXP1Q9H334 677 aaPredicted RBP17.85■□□□□ 0.45
TNFSF13-202ENST00000349228 RGL2O15211 777 aa17.84■□□□□ 0.45
TNFSF13-202ENST00000349228 RANBP6O60518 1105 aaKnown RBP17.84■□□□□ 0.45
TNFSF13-202ENST00000349228 NTSR2O95665 410 aa17.84■□□□□ 0.45
TNFSF13-202ENST00000349228 MARCKSP29966 332 aaPredicted RBP17.84■□□□□ 0.45
TNFSF13-202ENST00000349228 CTDSPL2Q05D32 466 aa17.84■□□□□ 0.45
TNFSF13-202ENST00000349228 DDB1Q16531 1140 aa17.84■□□□□ 0.45
TNFSF13-202ENST00000349228 NOSTRINQ8IVI9 506 aa17.84■□□□□ 0.45
TNFSF13-202ENST00000349228 SMARCC1Q92922 1105 aaPredicted RBP17.84■□□□□ 0.45
TNFSF13-202ENST00000349228 SLC26A6Q9BXS9 759 aa17.84■□□□□ 0.45
TNFSF13-202ENST00000349228 SENP2Q9HC62 589 aa17.84■□□□□ 0.45
TNFSF13-202ENST00000349228 SEC31BQ9NQW1 1179 aa17.84■□□□□ 0.45
TNFSF13-202ENST00000349228 LRP2BPQ9P2M1 347 aa17.84■□□□□ 0.45
TNFSF13-202ENST00000349228 ANAPC4Q9UJX5 808 aa17.84■□□□□ 0.45
TNFSF13-202ENST00000349228 LOC102724428A0A0B4J2F2 783 aa17.84■□□□□ 0.45
TNFSF13-202ENST00000349228 DEXIO95424 95 aa17.84■□□□□ 0.45
TNFSF13-202ENST00000349228 TUBB4AP04350 444 aa17.84■□□□□ 0.45
TNFSF13-202ENST00000349228 SIK1P57059 783 aa17.84■□□□□ 0.45
TNFSF13-202ENST00000349228 RTN1Q16799 776 aa17.84■□□□□ 0.45
TNFSF13-202ENST00000349228 SHC4Q6S5L8 630 aa17.84■□□□□ 0.45
TNFSF13-202ENST00000349228 CLEC4GQ6UXB4 293 aa17.84■□□□□ 0.45
TNFSF13-202ENST00000349228 KRI1Q8N9T8 703 aaKnown RBP17.84■□□□□ 0.45
TNFSF13-202ENST00000349228 BCL2L12Q9HB09 334 aa17.84■□□□□ 0.45
TNFSF13-202ENST00000349228 MORC2Q9Y6X9 1032 aaPredicted RBP17.84■□□□□ 0.45
TNFSF13-202ENST00000349228 SLIT2O94813 1529 aa17.83■□□□□ 0.45
TNFSF13-202ENST00000349228 CICQ96RK0 1608 aaPredicted RBP17.83■□□□□ 0.45
TNFSF13-202ENST00000349228 RREB1Q92766 1687 aa17.83■□□□□ 0.45
TNFSF13-202ENST00000349228 CBFA2T2O43439 604 aa17.83■□□□□ 0.45
TNFSF13-202ENST00000349228 MMP1P03956 469 aa17.83■□□□□ 0.45
TNFSF13-202ENST00000349228 BCAMP50895 628 aa17.83■□□□□ 0.45
TNFSF13-202ENST00000349228 CCZ1BP86790 482 aa17.83■□□□□ 0.45
TNFSF13-202ENST00000349228 CCZ1P86791 482 aaPredicted RBP17.83■□□□□ 0.45
TNFSF13-202ENST00000349228 RILPL1Q5EBL4 403 aa17.83■□□□□ 0.45
TNFSF13-202ENST00000349228 FILIP1Q7Z7B0 1213 aa17.83■□□□□ 0.45
TNFSF13-202ENST00000349228 NKX2-3Q8TAU0 364 aa17.83■□□□□ 0.45
TNFSF13-202ENST00000349228 C16orf45Q96MC5 204 aaPredicted RBP17.83■□□□□ 0.45
TNFSF13-202ENST00000349228 NIP7Q9Y221 180 aaKnown RBP eCLIP17.83■□□□□ 0.45
TNFSF13-202ENST00000349228 AHDC1Q5TGY3 1603 aaPredicted RBP17.83■□□□□ 0.44
TNFSF13-202ENST00000349228 PCP11498 1178 aaKnown RBP17.82■□□□□ 0.44
TNFSF13-202ENST00000349228 RXRAP19793 462 aa17.82■□□□□ 0.44
TNFSF13-202ENST00000349228 CHRNDQ07001 517 aa17.82■□□□□ 0.44
TNFSF13-202ENST00000349228 CEP135Q66GS9 1140 aa17.82■□□□□ 0.44
TNFSF13-202ENST00000349228 LCORLQ8N3X6 602 aa17.82■□□□□ 0.44
TNFSF13-202ENST00000349228 ERCC4Q92889 916 aaPredicted RBP17.82■□□□□ 0.44
TNFSF13-202ENST00000349228 CCDC94Q9BW85 323 aaPredicted RBP17.82■□□□□ 0.44
TNFSF13-202ENST00000349228 CEP131Q9UPN4 1083 aa17.82■□□□□ 0.44
TNFSF13-202ENST00000349228 SPATA31A1Q5TZJ5 1347 aa17.82■□□□□ 0.44
TNFSF13-202ENST00000349228 WNK3Q9BYP7 1800 aa17.82■□□□□ 0.44
TNFSF13-202ENST00000349228 MROH7-TTC4A0A0A0MT08 1334 aa17.82■□□□□ 0.44
TNFSF13-202ENST00000349228 ZNF804BA4D1E1 1349 aa17.82■□□□□ 0.44
TNFSF13-202ENST00000349228 UBE4AQ14139 1066 aa17.82■□□□□ 0.44
TNFSF13-202ENST00000349228 NCAPHQ15003 741 aa17.82■□□□□ 0.44
TNFSF13-202ENST00000349228 PTPN14Q15678 1187 aa17.82■□□□□ 0.44
TNFSF13-202ENST00000349228 OLFM4Q6UX06 510 aa17.82■□□□□ 0.44
TNFSF13-202ENST00000349228 NBPF11Q86T75 865 aa17.82■□□□□ 0.44
TNFSF13-202ENST00000349228 ZNF710Q8N1W2 664 aa17.82■□□□□ 0.44
TNFSF13-202ENST00000349228 CRACR2BQ8N4Y2 399 aaPredicted RBP17.82■□□□□ 0.44
TNFSF13-202ENST00000349228 ZNF579Q8NAF0 562 aaKnown RBP17.82■□□□□ 0.44
TNFSF13-202ENST00000349228 CCDC112Q8NEF3 446 aa17.82■□□□□ 0.44
TNFSF13-202ENST00000349228 COL16A1Q07092 1604 aaPredicted RBP17.81■□□□□ 0.44
TNFSF13-202ENST00000349228 ANKRD7Q92527 254 aa17.81■□□□□ 0.44
TNFSF13-202ENST00000349228 ESR2Q92731 530 aa17.81■□□□□ 0.44
TNFSF13-202ENST00000349228 KCNH3Q9ULD8 1083 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms