RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 CFAP100Q494V2 611 aa20.87■□□□□ 0.93
PTP4A3-202ENST00000349124 RESP18Q5W5W9 173 aa20.87■□□□□ 0.93
PTP4A3-202ENST00000349124 KCNH3Q9ULD8 1083 aa20.87■□□□□ 0.93
PTP4A3-202ENST00000349124 KAT6BQ8WYB5 2073 aa20.86■□□□□ 0.93
PTP4A3-202ENST00000349124 PPP6R2O75170 966 aa20.86■□□□□ 0.93
PTP4A3-202ENST00000349124 TOB1P50616 345 aaPredicted RBP20.86■□□□□ 0.93
PTP4A3-202ENST00000349124 RASGRF1Q13972 1273 aa20.86■□□□□ 0.93
PTP4A3-202ENST00000349124 ERCC6LQ2NKX8 1250 aa20.86■□□□□ 0.93
PTP4A3-202ENST00000349124 CCDC150Q8NCX0 1101 aa20.86■□□□□ 0.93
PTP4A3-202ENST00000349124 SLC12A7Q9Y666 1083 aa20.86■□□□□ 0.93
PTP4A3-202ENST00000349124 CDKL5O76039 1030 aa20.86■□□□□ 0.93
PTP4A3-202ENST00000349124 CYP19A1P11511 503 aaPredicted RBP20.86■□□□□ 0.93
PTP4A3-202ENST00000349124 TPM4P67936 248 aa20.86■□□□□ 0.93
PTP4A3-202ENST00000349124 CPLX2Q6PUV4 134 aaKnown RBP20.86■□□□□ 0.93
PTP4A3-202ENST00000349124 GRAMD1CQ8IYS0 662 aa20.86■□□□□ 0.93
PTP4A3-202ENST00000349124 CNNM3Q8NE01 707 aa20.86■□□□□ 0.93
PTP4A3-202ENST00000349124 NAPBQ9H115 298 aa20.86■□□□□ 0.93
PTP4A3-202ENST00000349124 SEC31BQ9NQW1 1179 aa20.86■□□□□ 0.93
PTP4A3-202ENST00000349124 KCND1Q9NSA2 647 aa20.86■□□□□ 0.93
PTP4A3-202ENST00000349124 SPEF2Q9C093 1822 aa20.86■□□□□ 0.93
PTP4A3-202ENST00000349124 UBR2Q8IWV8 1755 aa20.85■□□□□ 0.93
PTP4A3-202ENST00000349124 SLU7O95391 586 aaKnown RBP20.85■□□□□ 0.93
PTP4A3-202ENST00000349124 ZNF827Q17R98 1081 aa20.85■□□□□ 0.93
PTP4A3-202ENST00000349124 TIGD1Q96MW7 591 aa20.85■□□□□ 0.93
PTP4A3-202ENST00000349124 CDHR2Q9BYE9 1310 aa20.85■□□□□ 0.93
PTP4A3-202ENST00000349124 PATL2C9JE40 543 aaKnown RBP20.85■□□□□ 0.93
PTP4A3-202ENST00000349124 IKBKBO14920 756 aa20.85■□□□□ 0.93
PTP4A3-202ENST00000349124 FANCGO15287 622 aa20.85■□□□□ 0.93
PTP4A3-202ENST00000349124 TRIM29Q14134 588 aa20.85■□□□□ 0.93
PTP4A3-202ENST00000349124 SPATA5Q8NB90 893 aa20.85■□□□□ 0.93
PTP4A3-202ENST00000349124 TMEM87BQ96K49 555 aa20.85■□□□□ 0.93
PTP4A3-202ENST00000349124 DCCP43146 1447 aa20.85■□□□□ 0.93
PTP4A3-202ENST00000349124 ARID4AP29374 1257 aaPredicted RBP20.84■□□□□ 0.93
PTP4A3-202ENST00000349124 MYL5Q02045 173 aa20.84■□□□□ 0.93
PTP4A3-202ENST00000349124 NR5A1Q13285 461 aa20.84■□□□□ 0.93
PTP4A3-202ENST00000349124 KRBA2Q6ZNG9 492 aa20.84■□□□□ 0.93
PTP4A3-202ENST00000349124 HOMER1Q86YM7 354 aa20.84■□□□□ 0.93
PTP4A3-202ENST00000349124 MIGA1Q8NAN2 632 aa20.84■□□□□ 0.93
PTP4A3-202ENST00000349124 ERO1AQ96HE7 468 aa20.84■□□□□ 0.93
PTP4A3-202ENST00000349124 ZNF512BQ96KM6 892 aaPredicted RBP20.84■□□□□ 0.93
PTP4A3-202ENST00000349124 UTP14AQ9BVJ6 771 aaKnown RBP20.84■□□□□ 0.93
PTP4A3-202ENST00000349124 TEX13AQ9BXU3 409 aaPredicted RBP20.84■□□□□ 0.93
PTP4A3-202ENST00000349124 GSG1L2A8MUP6 293 aa20.84■□□□□ 0.93
PTP4A3-202ENST00000349124 SSRP1Q08945 709 aaKnown RBP20.84■□□□□ 0.93
PTP4A3-202ENST00000349124 INTS13Q9NVM9 706 aa20.84■□□□□ 0.93
PTP4A3-202ENST00000349124 IQSEC3Q9UPP2 1182 aaPredicted RBP20.84■□□□□ 0.93
PTP4A3-202ENST00000349124 ABCC12Q96J65 1359 aa20.84■□□□□ 0.93
PTP4A3-202ENST00000349124 PDE8AO60658 829 aa20.84■□□□□ 0.93
PTP4A3-202ENST00000349124 BCAMP50895 628 aa20.84■□□□□ 0.93
PTP4A3-202ENST00000349124 UTP14CQ5TAP6 766 aaKnown RBP20.84■□□□□ 0.93
PTP4A3-202ENST00000349124 USP49Q70CQ1 688 aa20.84■□□□□ 0.93
PTP4A3-202ENST00000349124 SGMS1Q86VZ5 419 aa20.84■□□□□ 0.93
PTP4A3-202ENST00000349124 PDILTQ8N807 584 aa20.84■□□□□ 0.93
PTP4A3-202ENST00000349124 JMYQ8N9B5 988 aa20.84■□□□□ 0.93
PTP4A3-202ENST00000349124 SLAIN2Q9P270 581 aa20.84■□□□□ 0.93
PTP4A3-202ENST00000349124 AKAP11Q9UKA4 1901 aa20.83■□□□□ 0.93
PTP4A3-202ENST00000349124 PRR29P0C7W0 189 aa20.83■□□□□ 0.93
PTP4A3-202ENST00000349124 DNAI1Q9UI46 699 aa20.83■□□□□ 0.93
PTP4A3-202ENST00000349124 FGFR2P21802 821 aa20.83■□□□□ 0.92
PTP4A3-202ENST00000349124 DIS3L2Q8IYB7 885 aaKnown RBP20.83■□□□□ 0.92
PTP4A3-202ENST00000349124 FAM177A1Q8N128 213 aaPredicted RBP20.83■□□□□ 0.92
PTP4A3-202ENST00000349124 LCORLQ8N3X6 602 aa20.83■□□□□ 0.92
PTP4A3-202ENST00000349124 OXER1Q8TDS5 423 aa20.83■□□□□ 0.92
PTP4A3-202ENST00000349124 LPIN2Q92539 896 aa20.83■□□□□ 0.92
PTP4A3-202ENST00000349124 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.83■□□□□ 0.92
PTP4A3-202ENST00000349124 MYO5AQ9Y4I1 1855 aaKnown RBP20.82■□□□□ 0.92
PTP4A3-202ENST00000349124 PUM3Q15397 648 aaKnown RBP20.82■□□□□ 0.92
PTP4A3-202ENST00000349124 NOSTRINQ8IVI9 506 aa20.82■□□□□ 0.92
PTP4A3-202ENST00000349124 TRMT44Q8IYL2 757 aaKnown RBP20.82■□□□□ 0.92
PTP4A3-202ENST00000349124 TMX1Q9H3N1 280 aa20.82■□□□□ 0.92
PTP4A3-202ENST00000349124 PCDHB6Q9Y5E3 794 aa20.82■□□□□ 0.92
PTP4A3-202ENST00000349124 PARP4Q9UKK3 1724 aaKnown RBP20.82■□□□□ 0.92
PTP4A3-202ENST00000349124 PSDA5PKW4 1024 aaPredicted RBP20.82■□□□□ 0.92
PTP4A3-202ENST00000349124 WTIPA6NIX2 430 aaPredicted RBP20.82■□□□□ 0.92
PTP4A3-202ENST00000349124 CUTAO60888 179 aa20.82■□□□□ 0.92
PTP4A3-202ENST00000349124 MDM2Q00987 491 aaPredicted RBP20.82■□□□□ 0.92
PTP4A3-202ENST00000349124 FMR1Q06787 632 aaKnown RBP eCLIP20.82■□□□□ 0.92
PTP4A3-202ENST00000349124 DZIP3Q86Y13 1208 aaKnown RBP20.82■□□□□ 0.92
PTP4A3-202ENST00000349124 ZNF397Q8NF99 534 aaPredicted RBP20.82■□□□□ 0.92
PTP4A3-202ENST00000349124 ZNF446Q9NWS9 450 aa20.82■□□□□ 0.92
PTP4A3-202ENST00000349124 SOS2Q07890 1332 aaPredicted RBP20.81■□□□□ 0.92
PTP4A3-202ENST00000349124 POLR2DO15514 142 aaKnown RBP20.81■□□□□ 0.92
PTP4A3-202ENST00000349124 AKNAD1Q5T1N1 836 aa20.81■□□□□ 0.92
PTP4A3-202ENST00000349124 NUP133Q8WUM0 1156 aa20.81■□□□□ 0.92
PTP4A3-202ENST00000349124 ST7Q9NRC1 585 aa20.81■□□□□ 0.92
PTP4A3-202ENST00000349124 hCG_1642624A0A1W2PR95 340 aa20.81■□□□□ 0.92
PTP4A3-202ENST00000349124 CCDC93Q567U6 631 aa20.81■□□□□ 0.92
PTP4A3-202ENST00000349124 KRI1Q8N9T8 703 aaKnown RBP20.81■□□□□ 0.92
PTP4A3-202ENST00000349124 GTPBP4Q9BZE4 634 aaKnown RBP20.81■□□□□ 0.92
PTP4A3-202ENST00000349124 L2HGDHQ9H9P8 463 aa20.81■□□□□ 0.92
PTP4A3-202ENST00000349124 SERTAD1Q9UHV2 236 aa20.81■□□□□ 0.92
PTP4A3-202ENST00000349124 MORC2Q9Y6X9 1032 aaPredicted RBP20.81■□□□□ 0.92
PTP4A3-202ENST00000349124 FAM237AA0A1B0GTK4 181 aa20.8■□□□□ 0.92
PTP4A3-202ENST00000349124 FMNL1O95466 1100 aaPredicted RBP20.8■□□□□ 0.92
PTP4A3-202ENST00000349124 UQCRFS1P1P0C7P4 283 aa20.8■□□□□ 0.92
PTP4A3-202ENST00000349124 LIFRP42702 1097 aa20.8■□□□□ 0.92
PTP4A3-202ENST00000349124 MFSD6Q6ZSS7 791 aa20.8■□□□□ 0.92
PTP4A3-202ENST00000349124 BTG4Q9NY30 223 aa20.8■□□□□ 0.92
PTP4A3-202ENST00000349124 A0A0G2JS52 829 aa20.8■□□□□ 0.92
PTP4A3-202ENST00000349124 SUSD4Q5VX71 490 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms