RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 CNNM2Q9H8M5 875 aa14.11□□□□□ -0.15
SNRNP48-201ENST00000342415 CMA1P23946 247 aa14.11□□□□□ -0.15
SNRNP48-201ENST00000342415 HLTFQ14527 1009 aaKnown RBP eCLIP14.11□□□□□ -0.15
SNRNP48-201ENST00000342415 SMC1AQ14683 1233 aaKnown RBP14.11□□□□□ -0.15
SNRNP48-201ENST00000342415 SPECC1LQ69YQ0 1117 aa14.11□□□□□ -0.15
SNRNP48-201ENST00000342415 STOX1Q6ZVD7 989 aa14.11□□□□□ -0.15
SNRNP48-201ENST00000342415 HEATR3Q7Z4Q2 680 aa14.11□□□□□ -0.15
SNRNP48-201ENST00000342415 MMRN2Q9H8L6 949 aa14.11□□□□□ -0.15
SNRNP48-201ENST00000342415 RTEL1Q9NZ71 1219 aa14.11□□□□□ -0.15
SNRNP48-201ENST00000342415 EXOC5O00471 708 aa14.1□□□□□ -0.15
SNRNP48-201ENST00000342415 KRT9P35527 623 aa14.1□□□□□ -0.15
SNRNP48-201ENST00000342415 MAP9Q49MG5 647 aa14.1□□□□□ -0.15
SNRNP48-201ENST00000342415 ZMYM1Q5SVZ6 1142 aa14.1□□□□□ -0.15
SNRNP48-201ENST00000342415 PIK3AP1Q6ZUJ8 805 aa14.1□□□□□ -0.15
SNRNP48-201ENST00000342415 CUTAO60888 179 aa14.1□□□□□ -0.15
SNRNP48-201ENST00000342415 KMT5BQ4FZB7 885 aa14.1□□□□□ -0.15
SNRNP48-201ENST00000342415 RILPL1Q5EBL4 403 aa14.1□□□□□ -0.15
SNRNP48-201ENST00000342415 ZCCHC17Q9NP64 241 aaKnown RBP14.1□□□□□ -0.15
SNRNP48-201ENST00000342415 TCP11L1Q9NUJ3 509 aa14.1□□□□□ -0.15
SNRNP48-201ENST00000342415 ANKIB1Q9P2G1 1089 aa14.1□□□□□ -0.15
SNRNP48-201ENST00000342415 PTPRMP28827 1452 aa14.1□□□□□ -0.15
SNRNP48-201ENST00000342415 CPS1P31327 1500 aa14.1□□□□□ -0.15
SNRNP48-201ENST00000342415 PPRC1Q5VV67 1664 aaKnown RBP14.1□□□□□ -0.15
SNRNP48-201ENST00000342415 GOLGA6L10A6NI86 522 aa14.1□□□□□ -0.15
SNRNP48-201ENST00000342415 PAFAH1B1P43034 410 aa14.1□□□□□ -0.15
SNRNP48-201ENST00000342415 NR5A1Q13285 461 aa14.1□□□□□ -0.15
SNRNP48-201ENST00000342415 COL9A3Q14050 684 aaPredicted RBP14.1□□□□□ -0.15
SNRNP48-201ENST00000342415 KAT14Q9H8E8 782 aa14.1□□□□□ -0.15
SNRNP48-201ENST00000342415 ARHGEF40Q8TER5 1519 aa14.09□□□□□ -0.15
SNRNP48-201ENST00000342415 RNASE9P60153 205 aaKnown RBP14.09□□□□□ -0.15
SNRNP48-201ENST00000342415 CCDC122Q5T0U0 273 aa14.09□□□□□ -0.15
SNRNP48-201ENST00000342415 SYNE4Q8N205 404 aa14.09□□□□□ -0.15
SNRNP48-201ENST00000342415 SDR42E1Q8WUS8 393 aa14.09□□□□□ -0.15
SNRNP48-201ENST00000342415 NIP7Q9Y221 180 aaKnown RBP eCLIP14.09□□□□□ -0.15
SNRNP48-201ENST00000342415 ZFYVE27Q5T4F4 411 aa14.09□□□□□ -0.15
SNRNP48-201ENST00000342415 ARHGEF25Q86VW2 580 aa14.09□□□□□ -0.15
SNRNP48-201ENST00000342415 PLA2G4DQ86XP0 818 aa14.09□□□□□ -0.15
SNRNP48-201ENST00000342415 C19orf44Q9H6X5 657 aa14.09□□□□□ -0.15
SNRNP48-201ENST00000342415 ALKQ9UM73 1620 aa14.09□□□□□ -0.15
SNRNP48-201ENST00000342415 ASIC1P78348 528 aa14.09□□□□□ -0.15
SNRNP48-201ENST00000342415 SPTY2D1Q68D10 685 aaPredicted RBP14.09□□□□□ -0.15
SNRNP48-201ENST00000342415 TAX1BP1Q86VP1 789 aa14.09□□□□□ -0.15
SNRNP48-201ENST00000342415 CEP112Q8N8E3 955 aa14.09□□□□□ -0.15
SNRNP48-201ENST00000342415 CTAGE1Q96RT6 745 aa14.09□□□□□ -0.15
SNRNP48-201ENST00000342415 USO1O60763 962 aaKnown RBP14.08□□□□□ -0.15
SNRNP48-201ENST00000342415 CASP1P29466 404 aa14.08□□□□□ -0.15
SNRNP48-201ENST00000342415 KRT2P35908 639 aa14.08□□□□□ -0.15
SNRNP48-201ENST00000342415 CT47A1Q5JQC4 288 aaPredicted RBP14.08□□□□□ -0.15
SNRNP48-201ENST00000342415 TMTC2Q8N394 836 aa14.08□□□□□ -0.15
SNRNP48-201ENST00000342415 LUC7L2Q9Y383 392 aaKnown RBP14.08□□□□□ -0.15
SNRNP48-201ENST00000342415 TMEM232C9JQI7 657 aa14.08□□□□□ -0.16
SNRNP48-201ENST00000342415 PHKA1P46020 1223 aa14.08□□□□□ -0.16
SNRNP48-201ENST00000342415 CLCN6P51797 869 aa14.08□□□□□ -0.16
SNRNP48-201ENST00000342415 RNF187Q5TA31 235 aaPredicted RBP14.08□□□□□ -0.16
SNRNP48-201ENST00000342415 MAGEB6P1A0A0J9YX57 407 aa14.08□□□□□ -0.16
SNRNP48-201ENST00000342415 IL2RBP14784 551 aa14.08□□□□□ -0.16
SNRNP48-201ENST00000342415 CDC25AP30304 524 aa14.08□□□□□ -0.16
SNRNP48-201ENST00000342415 IQUBQ8NA54 791 aa14.08□□□□□ -0.16
SNRNP48-201ENST00000342415 SAMSN1Q9NSI8 373 aaKnown RBP14.08□□□□□ -0.16
SNRNP48-201ENST00000342415 KIF23Q02241 960 aaPredicted RBP14.08□□□□□ -0.16
SNRNP48-201ENST00000342415 IPO4Q8TEX9 1081 aaKnown RBP14.08□□□□□ -0.16
SNRNP48-201ENST00000342415 TMEM87BQ96K49 555 aa14.08□□□□□ -0.16
SNRNP48-201ENST00000342415 BMP2KQ9NSY1 1161 aaPredicted RBP14.08□□□□□ -0.16
SNRNP48-201ENST00000342415 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.08□□□□□ -0.16
SNRNP48-201ENST00000342415 SYNRGQ9UMZ2 1314 aa14.07□□□□□ -0.16
SNRNP48-201ENST00000342415 ATP2C2O75185 946 aa14.07□□□□□ -0.16
SNRNP48-201ENST00000342415 SLC39A14Q15043 492 aa14.07□□□□□ -0.16
SNRNP48-201ENST00000342415 IQCEQ6IPM2 695 aa14.07□□□□□ -0.16
SNRNP48-201ENST00000342415 NOSTRINQ8IVI9 506 aa14.07□□□□□ -0.16
SNRNP48-201ENST00000342415 MLKLQ8NB16 471 aa14.07□□□□□ -0.16
SNRNP48-201ENST00000342415 SEC63Q9UGP8 760 aaKnown RBP14.07□□□□□ -0.16
SNRNP48-201ENST00000342415 NEO1Q92859 1461 aa14.07□□□□□ -0.16
SNRNP48-201ENST00000342415 MPHOSPH10O00566 681 aaKnown RBP14.07□□□□□ -0.16
SNRNP48-201ENST00000342415 ZBTB22O15209 634 aa14.07□□□□□ -0.16
SNRNP48-201ENST00000342415 NOP2P46087 812 aaKnown RBP14.07□□□□□ -0.16
SNRNP48-201ENST00000342415 TCERG1LQ5VWI1 586 aa14.07□□□□□ -0.16
SNRNP48-201ENST00000342415 GREM2Q9H772 168 aa14.07□□□□□ -0.16
SNRNP48-201ENST00000342415 MYO3AQ8NEV4 1616 aa14.07□□□□□ -0.16
SNRNP48-201ENST00000342415 ADGRB1O14514 1584 aa14.07□□□□□ -0.16
SNRNP48-201ENST00000342415 PDE6AP16499 860 aa14.07□□□□□ -0.16
SNRNP48-201ENST00000342415 RBM6P78332 1123 aaKnown RBP14.07□□□□□ -0.16
SNRNP48-201ENST00000342415 APOA5Q6Q788 366 aa14.07□□□□□ -0.16
SNRNP48-201ENST00000342415 TAF4BQ92750 862 aa14.07□□□□□ -0.16
SNRNP48-201ENST00000342415 PSMA7O14818 248 aa14.06□□□□□ -0.16
SNRNP48-201ENST00000342415 ZEB2O60315 1214 aa14.06□□□□□ -0.16
SNRNP48-201ENST00000342415 CCDC42Q96M95 316 aa14.06□□□□□ -0.16
SNRNP48-201ENST00000342415 MCM9Q9NXL9 1143 aa14.06□□□□□ -0.16
SNRNP48-201ENST00000342415 A2ML1A8K2U0 1454 aa14.06□□□□□ -0.16
SNRNP48-201ENST00000342415 SHTN1A0MZ66 631 aa14.06□□□□□ -0.16
SNRNP48-201ENST00000342415 TMCO5BA8MYB1 307 aa14.06□□□□□ -0.16
SNRNP48-201ENST00000342415 DEXIO95424 95 aa14.06□□□□□ -0.16
SNRNP48-201ENST00000342415 RDXP35241 583 aaKnown RBP14.06□□□□□ -0.16
SNRNP48-201ENST00000342415 CCDC40Q4G0X9 1142 aa14.06□□□□□ -0.16
SNRNP48-201ENST00000342415 CNGA4Q8IV77 575 aa14.06□□□□□ -0.16
SNRNP48-201ENST00000342415 SETBP1Q9Y6X0 1596 aa14.06□□□□□ -0.16
SNRNP48-201ENST00000342415 POTEB2H3BUK9 544 aa14.06□□□□□ -0.16
SNRNP48-201ENST00000342415 PRKAB2O43741 272 aa14.06□□□□□ -0.16
SNRNP48-201ENST00000342415 TUBB4AP04350 444 aa14.06□□□□□ -0.16
SNRNP48-201ENST00000342415 GPATCH11Q8N954 259 aa14.06□□□□□ -0.16
SNRNP48-201ENST00000342415 CCDC43Q96MW1 224 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms