RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 FMNL1O95466 1100 aaPredicted RBP16.12■□□□□ 0.17
NECTIN1-203ENST00000341398 MAP4K4O95819 1239 aaPredicted RBP16.12■□□□□ 0.17
NECTIN1-203ENST00000341398 PSMC4P43686 418 aa16.12■□□□□ 0.17
NECTIN1-203ENST00000341398 ZFPM1Q8IX07 1006 aa16.12■□□□□ 0.17
NECTIN1-203ENST00000341398 SCYL3Q8IZE3 742 aa16.12■□□□□ 0.17
NECTIN1-203ENST00000341398 FRAT1Q92837 279 aaPredicted RBP16.12■□□□□ 0.17
NECTIN1-203ENST00000341398 ZHX2Q9Y6X8 837 aa16.12■□□□□ 0.17
NECTIN1-203ENST00000341398 CTNND1O60716 968 aaKnown RBP16.11■□□□□ 0.17
NECTIN1-203ENST00000341398 BTDP43251 543 aa16.11■□□□□ 0.17
NECTIN1-203ENST00000341398 ATF7IPQ6VMQ6 1270 aa16.11■□□□□ 0.17
NECTIN1-203ENST00000341398 RAET1EQ8TD07 263 aa16.11■□□□□ 0.17
NECTIN1-203ENST00000341398 ARHGAP39Q9C0H5 1083 aa16.11■□□□□ 0.17
NECTIN1-203ENST00000341398 PHF20L1A8MW92 1017 aa16.1■□□□□ 0.17
NECTIN1-203ENST00000341398 MAP3K10Q02779 954 aa16.1■□□□□ 0.17
NECTIN1-203ENST00000341398 MECOMQ03112 1051 aa16.1■□□□□ 0.17
NECTIN1-203ENST00000341398 PICALMQ13492 652 aa16.1■□□□□ 0.17
NECTIN1-203ENST00000341398 SRRDQ9UH36 339 aa16.1■□□□□ 0.17
NECTIN1-203ENST00000341398 MROH7-TTC4A0A0A0MT08 1334 aa16.1■□□□□ 0.17
NECTIN1-203ENST00000341398 GPR75-ASB3A0A0A6YYF3 556 aa16.09■□□□□ 0.17
NECTIN1-203ENST00000341398 NPM3O75607 178 aaKnown RBP16.09■□□□□ 0.17
NECTIN1-203ENST00000341398 MYCP01106 439 aaPredicted RBP16.09■□□□□ 0.17
NECTIN1-203ENST00000341398 UQCRFS1P1P0C7P4 283 aa16.09■□□□□ 0.17
NECTIN1-203ENST00000341398 TRIM27P14373 513 aa16.09■□□□□ 0.17
NECTIN1-203ENST00000341398 PTPRAP18433 802 aa16.09■□□□□ 0.17
NECTIN1-203ENST00000341398 GADL1Q6ZQY3 521 aa16.09■□□□□ 0.17
NECTIN1-203ENST00000341398 SPATA5Q8NB90 893 aa16.09■□□□□ 0.17
NECTIN1-203ENST00000341398 SH3TC2Q8TF17 1288 aa16.09■□□□□ 0.17
NECTIN1-203ENST00000341398 TRIM47Q96LD4 638 aa16.09■□□□□ 0.17
NECTIN1-203ENST00000341398 NOL10Q9BSC4 688 aaKnown RBP16.09■□□□□ 0.17
NECTIN1-203ENST00000341398 RAI14Q9P0K7 980 aa16.09■□□□□ 0.17
NECTIN1-203ENST00000341398 A0A0G2JLL6 359 aaPredicted RBP16.08■□□□□ 0.16
NECTIN1-203ENST00000341398 DDTLA6NHG4 134 aaPredicted RBP16.08■□□□□ 0.16
NECTIN1-203ENST00000341398 TBC1D12O60347 775 aa16.08■□□□□ 0.16
NECTIN1-203ENST00000341398 ECM2O94769 699 aaPredicted RBP16.08■□□□□ 0.16
NECTIN1-203ENST00000341398 FCGRTP55899 365 aa16.08■□□□□ 0.16
NECTIN1-203ENST00000341398 MOGSQ13724 837 aa16.08■□□□□ 0.16
NECTIN1-203ENST00000341398 PRRT2Q7Z6L0 340 aaPredicted RBP16.08■□□□□ 0.16
NECTIN1-203ENST00000341398 NKX2-3Q8TAU0 364 aa16.08■□□□□ 0.16
NECTIN1-203ENST00000341398 HMG20BQ9P0W2 317 aa16.08■□□□□ 0.16
NECTIN1-203ENST00000341398 LRP2BPQ9P2M1 347 aa16.08■□□□□ 0.16
NECTIN1-203ENST00000341398 BIN2Q9UBW5 565 aaPredicted RBP16.08■□□□□ 0.16
NECTIN1-203ENST00000341398 SLC45A1Q9Y2W3 748 aa16.08■□□□□ 0.16
NECTIN1-203ENST00000341398 AFG3L2Q9Y4W6 797 aa16.08■□□□□ 0.16
NECTIN1-203ENST00000341398 MYPNQ86TC9 1320 aa16.07■□□□□ 0.16
NECTIN1-203ENST00000341398 OSBPP22059 807 aa16.07■□□□□ 0.16
NECTIN1-203ENST00000341398 GRK4P32298 578 aa16.07■□□□□ 0.16
NECTIN1-203ENST00000341398 ZKSCAN2Q63HK3 967 aa16.07■□□□□ 0.16
NECTIN1-203ENST00000341398 GPAT2Q6NUI2 795 aa16.07■□□□□ 0.16
NECTIN1-203ENST00000341398 SH3BP5LQ7L8J4 393 aa16.07■□□□□ 0.16
NECTIN1-203ENST00000341398 CLUAP1Q96AJ1 413 aa16.07■□□□□ 0.16
NECTIN1-203ENST00000341398 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.07■□□□□ 0.16
NECTIN1-203ENST00000341398 MGAMO43451 1857 aa16.07■□□□□ 0.16
NECTIN1-203ENST00000341398 ZSWIM8A7E2V4 1837 aa16.07■□□□□ 0.16
NECTIN1-203ENST00000341398 ATRNL1Q5VV63 1379 aa16.06■□□□□ 0.16
NECTIN1-203ENST00000341398 ADGRA2Q96PE1 1338 aa16.06■□□□□ 0.16
NECTIN1-203ENST00000341398 BCAR3O75815 825 aa16.06■□□□□ 0.16
NECTIN1-203ENST00000341398 ARID4AP29374 1257 aaPredicted RBP16.06■□□□□ 0.16
NECTIN1-203ENST00000341398 UBXN2AP68543 259 aa16.06■□□□□ 0.16
NECTIN1-203ENST00000341398 OS9Q13438 667 aaPredicted RBP16.06■□□□□ 0.16
NECTIN1-203ENST00000341398 CCDC158Q5M9N0 1113 aa16.06■□□□□ 0.16
NECTIN1-203ENST00000341398 SMCR8Q8TEV9 937 aaPredicted RBP16.06■□□□□ 0.16
NECTIN1-203ENST00000341398 NSUN4Q96CB9 384 aaKnown RBP16.06■□□□□ 0.16
NECTIN1-203ENST00000341398 TBC1D2Q9BYX2 928 aa16.06■□□□□ 0.16
NECTIN1-203ENST00000341398 DDX4Q9NQI0 724 aaKnown RBP16.06■□□□□ 0.16
NECTIN1-203ENST00000341398 DOCK1Q14185 1865 aa16.06■□□□□ 0.16
NECTIN1-203ENST00000341398 BAG3O95817 575 aa16.05■□□□□ 0.16
NECTIN1-203ENST00000341398 CYP2C8P10632 490 aa16.05■□□□□ 0.16
NECTIN1-203ENST00000341398 BCRP11274 1271 aa16.05■□□□□ 0.16
NECTIN1-203ENST00000341398 OSBPL5Q9H0X9 879 aaPredicted RBP16.05■□□□□ 0.16
NECTIN1-203ENST00000341398 PNMA3Q9UL41 463 aa16.05■□□□□ 0.16
NECTIN1-203ENST00000341398 MKI67P46013 3256 aaKnown RBP16.05■□□□□ 0.16
NECTIN1-203ENST00000341398 RFX7Q2KHR2 1363 aa16.04■□□□□ 0.16
NECTIN1-203ENST00000341398 PTPRFP10586 1907 aa16.04■□□□□ 0.16
NECTIN1-203ENST00000341398 PNMA6EA0A0J9YXQ4 647 aa16.04■□□□□ 0.16
NECTIN1-203ENST00000341398 TRIM75PA6NK02 468 aa16.04■□□□□ 0.16
NECTIN1-203ENST00000341398 PLCG2P16885 1265 aa16.04■□□□□ 0.16
NECTIN1-203ENST00000341398 RHBDL3P58872 404 aa16.04■□□□□ 0.16
NECTIN1-203ENST00000341398 TTC39AQ5SRH9 613 aa16.04■□□□□ 0.16
NECTIN1-203ENST00000341398 TBC1D9Q6ZT07 1266 aa16.04■□□□□ 0.16
NECTIN1-203ENST00000341398 GPR108Q9NPR9 543 aa16.04■□□□□ 0.16
NECTIN1-203ENST00000341398 IGSF3O75054 1194 aa16.03■□□□□ 0.16
NECTIN1-203ENST00000341398 CTGFP29279 349 aa16.03■□□□□ 0.16
NECTIN1-203ENST00000341398 PABPC4Q13310 644 aaKnown RBP eCLIP16.03■□□□□ 0.16
NECTIN1-203ENST00000341398 HABP4Q5JVS0 413 aaKnown RBP16.03■□□□□ 0.16
NECTIN1-203ENST00000341398 TEX11Q8IYF3 940 aa16.03■□□□□ 0.16
NECTIN1-203ENST00000341398 SLAIN1Q8ND83 568 aa16.03■□□□□ 0.16
NECTIN1-203ENST00000341398 PHIPQ8WWQ0 1821 aa16.03■□□□□ 0.16
NECTIN1-203ENST00000341398 CAPN2P17655 700 aa16.02■□□□□ 0.16
NECTIN1-203ENST00000341398 MCAMP43121 646 aa16.02■□□□□ 0.16
NECTIN1-203ENST00000341398 ATP8B2P98198 1209 aa16.02■□□□□ 0.16
NECTIN1-203ENST00000341398 MTFR1Q15390 333 aa16.02■□□□□ 0.16
NECTIN1-203ENST00000341398 NAA16Q6N069 864 aaPredicted RBP16.02■□□□□ 0.16
NECTIN1-203ENST00000341398 PI16Q6UXB8 463 aa16.02■□□□□ 0.16
NECTIN1-203ENST00000341398 FTSJ3Q8IY81 847 aaKnown RBP16.02■□□□□ 0.16
NECTIN1-203ENST00000341398 TMEM57Q8N5G2 664 aa16.02■□□□□ 0.16
NECTIN1-203ENST00000341398 PROCA1Q8NCQ7 364 aaPredicted RBP16.02■□□□□ 0.16
NECTIN1-203ENST00000341398 RNF208Q9H0X6 261 aa16.02■□□□□ 0.16
NECTIN1-203ENST00000341398 DHX36Q9H2U1 1008 aaKnown RBP16.02■□□□□ 0.16
NECTIN1-203ENST00000341398 AS3MTQ9HBK9 375 aa16.02■□□□□ 0.16
NECTIN1-203ENST00000341398 HERC5Q9UII4 1024 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 357.5 ms