RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 ECE2O60344 883 aa24.98■■□□□ 1.59
VRK2-201ENST00000340157 CYP2D6P10635 497 aa24.98■■□□□ 1.59
VRK2-201ENST00000340157 KIAA2012Q0VF49 1180 aa24.98■■□□□ 1.59
VRK2-201ENST00000340157 FOXD4L5Q5VV16 416 aaPredicted RBP24.98■■□□□ 1.59
VRK2-201ENST00000340157 FOXD4L4Q8WXT5 416 aaPredicted RBP24.98■■□□□ 1.59
VRK2-201ENST00000340157 ANGEL1Q9UNK9 670 aaKnown RBP24.98■■□□□ 1.59
VRK2-201ENST00000340157 G3V3G9 751 aa24.97■■□□□ 1.59
VRK2-201ENST00000340157 JAK2O60674 1132 aa24.97■■□□□ 1.59
VRK2-201ENST00000340157 BAG4O95429 457 aaKnown RBP24.97■■□□□ 1.59
VRK2-201ENST00000340157 FGRP09769 529 aa24.97■■□□□ 1.59
VRK2-201ENST00000340157 RHBDL3P58872 404 aa24.97■■□□□ 1.59
VRK2-201ENST00000340157 DCAF8Q5TAQ9 597 aa24.97■■□□□ 1.59
VRK2-201ENST00000340157 SGIP1Q9BQI5 828 aa24.97■■□□□ 1.59
VRK2-201ENST00000340157 RNF41Q9H4P4 317 aaPredicted RBP24.97■■□□□ 1.59
VRK2-201ENST00000340157 NCOA5Q9HCD5 579 aaKnown RBP24.97■■□□□ 1.59
VRK2-201ENST00000340157 HPS5Q9UPZ3 1129 aa24.97■■□□□ 1.59
VRK2-201ENST00000340157 DAGLAQ9Y4D2 1042 aa24.97■■□□□ 1.59
VRK2-201ENST00000340157 CTDNEP1O95476 244 aa24.96■■□□□ 1.59
VRK2-201ENST00000340157 CCT2P78371 535 aaKnown RBP24.96■■□□□ 1.59
VRK2-201ENST00000340157 SBK1Q52WX2 424 aa24.96■■□□□ 1.59
VRK2-201ENST00000340157 RRP12Q5JTH9 1297 aaKnown RBP24.96■■□□□ 1.59
VRK2-201ENST00000340157 KLF18A0A0U1RQI7 1052 aa24.96■■□□□ 1.59
VRK2-201ENST00000340157 F8W031 263 aaPredicted RBP24.96■■□□□ 1.59
VRK2-201ENST00000340157 USP17L8P0C7I0 530 aa24.96■■□□□ 1.59
VRK2-201ENST00000340157 CHAMP1Q96JM3 812 aa24.96■■□□□ 1.59
VRK2-201ENST00000340157 TMEM87BQ96K49 555 aa24.96■■□□□ 1.59
VRK2-201ENST00000340157 GBP4Q96PP9 640 aa24.96■■□□□ 1.59
VRK2-201ENST00000340157 LY9Q9HBG7 655 aa24.96■■□□□ 1.59
VRK2-201ENST00000340157 ARPP21Q9UBL0 812 aaPredicted RBP24.96■■□□□ 1.59
VRK2-201ENST00000340157 COL4A5P29400 1685 aa24.95■■□□□ 1.59
VRK2-201ENST00000340157 MYH1P12882 1939 aa24.95■■□□□ 1.58
VRK2-201ENST00000340157 POLD1P28340 1107 aa24.95■■□□□ 1.58
VRK2-201ENST00000340157 CCDC93Q567U6 631 aa24.95■■□□□ 1.58
VRK2-201ENST00000340157 TGFBRAP1Q8WUH2 860 aa24.95■■□□□ 1.58
VRK2-201ENST00000340157 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.95■■□□□ 1.58
VRK2-201ENST00000340157 STX6O43752 255 aa24.94■■□□□ 1.58
VRK2-201ENST00000340157 USP5P45974 858 aa24.94■■□□□ 1.58
VRK2-201ENST00000340157 SLF2Q8IX21 1173 aa24.94■■□□□ 1.58
VRK2-201ENST00000340157 NSUN7Q8NE18 718 aaKnown RBP24.94■■□□□ 1.58
VRK2-201ENST00000340157 SMARCC2Q8TAQ2 1214 aa24.94■■□□□ 1.58
VRK2-201ENST00000340157 NOL10Q9BSC4 688 aaKnown RBP24.94■■□□□ 1.58
VRK2-201ENST00000340157 TOMM22Q9NS69 142 aa24.94■■□□□ 1.58
VRK2-201ENST00000340157 MCM9Q9NXL9 1143 aa24.94■■□□□ 1.58
VRK2-201ENST00000340157 NAP1L2Q9ULW6 460 aaPredicted RBP24.94■■□□□ 1.58
VRK2-201ENST00000340157 TTF2Q9UNY4 1162 aaKnown RBP24.94■■□□□ 1.58
VRK2-201ENST00000340157 ECM29Q5VYK3 1845 aa24.94■■□□□ 1.58
VRK2-201ENST00000340157 WDR33Q9C0J8 1336 aaKnown RBP24.94■■□□□ 1.58
VRK2-201ENST00000340157 TGFB2P61812 414 aa24.94■■□□□ 1.58
VRK2-201ENST00000340157 DACT2Q5SW24 774 aa24.94■■□□□ 1.58
VRK2-201ENST00000340157 SUPT20HQ8NEM7 779 aa24.94■■□□□ 1.58
VRK2-201ENST00000340157 TCHHQ07283 1943 aa24.93■■□□□ 1.58
VRK2-201ENST00000340157 STRIP1Q5VSL9 837 aa24.93■■□□□ 1.58
VRK2-201ENST00000340157 RAB11FIP4Q86YS3 637 aa24.93■■□□□ 1.58
VRK2-201ENST00000340157 CERS3Q8IU89 383 aa24.93■■□□□ 1.58
VRK2-201ENST00000340157 PSDA5PKW4 1024 aaPredicted RBP24.92■■□□□ 1.58
VRK2-201ENST00000340157 YDJCA8MPS7 323 aa24.92■■□□□ 1.58
VRK2-201ENST00000340157 GOLGA8BA8MQT2 603 aa24.92■■□□□ 1.58
VRK2-201ENST00000340157 TMEM67Q5HYA8 995 aa24.92■■□□□ 1.58
VRK2-201ENST00000340157 SGMS1Q86VZ5 419 aa24.92■■□□□ 1.58
VRK2-201ENST00000340157 PSMD1Q99460 953 aa24.92■■□□□ 1.58
VRK2-201ENST00000340157 ZKSCAN3Q9BRR0 538 aa24.92■■□□□ 1.58
VRK2-201ENST00000340157 LLPHQ9BRT6 129 aaKnown RBP24.92■■□□□ 1.58
VRK2-201ENST00000340157 MTMR6Q9Y217 621 aa24.92■■□□□ 1.58
VRK2-201ENST00000340157 PPIP5K2O43314 1243 aa24.92■■□□□ 1.58
VRK2-201ENST00000340157 PRDM1O75626 825 aa24.92■■□□□ 1.58
VRK2-201ENST00000340157 LIFRP42702 1097 aa24.92■■□□□ 1.58
VRK2-201ENST00000340157 SCNN1DP51172 638 aa24.92■■□□□ 1.58
VRK2-201ENST00000340157 SLC4A8Q2Y0W8 1093 aa24.92■■□□□ 1.58
VRK2-201ENST00000340157 GRIPAP1Q4V328 841 aa24.92■■□□□ 1.58
VRK2-201ENST00000340157 C12orf60Q5U649 245 aa24.92■■□□□ 1.58
VRK2-201ENST00000340157 MAPKAPK5Q8IW41 473 aa24.92■■□□□ 1.58
VRK2-201ENST00000340157 RTKN2Q8IZC4 609 aa24.92■■□□□ 1.58
VRK2-201ENST00000340157 FER1L6Q2WGJ9 1857 aa24.91■■□□□ 1.58
VRK2-201ENST00000340157 IFIT3O14879 490 aaKnown RBP24.91■■□□□ 1.58
VRK2-201ENST00000340157 PCP11498 1178 aaKnown RBP24.91■■□□□ 1.58
VRK2-201ENST00000340157 FKBP1AP62942 108 aaKnown RBP24.91■■□□□ 1.58
VRK2-201ENST00000340157 TEX11Q8IYF3 940 aa24.91■■□□□ 1.58
VRK2-201ENST00000340157 ROBO3Q96MS0 1386 aa24.91■■□□□ 1.58
VRK2-201ENST00000340157 ZSCAN22P10073 491 aaPredicted RBP24.9■■□□□ 1.58
VRK2-201ENST00000340157 PLCG2P16885 1265 aa24.9■■□□□ 1.58
VRK2-201ENST00000340157 APOA5Q6Q788 366 aa24.9■■□□□ 1.58
VRK2-201ENST00000340157 ESR2Q92731 530 aa24.9■■□□□ 1.58
VRK2-201ENST00000340157 PIM2Q9P1W9 311 aa24.9■■□□□ 1.58
VRK2-201ENST00000340157 FLT1P17948 1338 aa24.9■■□□□ 1.58
VRK2-201ENST00000340157 ORC4O43929 436 aa24.89■■□□□ 1.58
VRK2-201ENST00000340157 DDX11Q96FC9 970 aa24.89■■□□□ 1.58
VRK2-201ENST00000340157 MTA3Q9BTC8 594 aa24.89■■□□□ 1.58
VRK2-201ENST00000340157 PTPDC1A2A3K4 754 aa24.89■■□□□ 1.57
VRK2-201ENST00000340157 USP17L3A6NCW0 530 aa24.89■■□□□ 1.57
VRK2-201ENST00000340157 USP17L4A6NCW7 530 aa24.89■■□□□ 1.57
VRK2-201ENST00000340157 DDX11L8A8MPP1 907 aa24.89■■□□□ 1.57
VRK2-201ENST00000340157 PTGER2P43116 358 aa24.89■■□□□ 1.57
VRK2-201ENST00000340157 LARP1BQ659C4 914 aaKnown RBP24.89■■□□□ 1.57
VRK2-201ENST00000340157 USP17L1Q7RTZ2 530 aa24.89■■□□□ 1.57
VRK2-201ENST00000340157 SEC23AQ15436 765 aa24.88■■□□□ 1.57
VRK2-201ENST00000340157 ZNF277Q9NRM2 450 aaPredicted RBP24.88■■□□□ 1.57
VRK2-201ENST00000340157 SAP30BPQ9UHR5 308 aaKnown RBP24.88■■□□□ 1.57
VRK2-201ENST00000340157 PLCD1P51178 756 aa24.87■■□□□ 1.57
VRK2-201ENST00000340157 HHIPL2Q6UWX4 724 aa24.87■■□□□ 1.57
VRK2-201ENST00000340157 PPFIA3O75145 1194 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms