RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 ATRNL1Q5VV63 1379 aa19.41■□□□□ 0.7
LINC01116-202ENST00000339037 AK9Q5TCS8 1911 aa19.41■□□□□ 0.7
LINC01116-202ENST00000339037 CXCL11O14625 94 aa19.4■□□□□ 0.7
LINC01116-202ENST00000339037 FMNL1O95466 1100 aaPredicted RBP19.4■□□□□ 0.7
LINC01116-202ENST00000339037 OSBPP22059 807 aa19.4■□□□□ 0.7
LINC01116-202ENST00000339037 HOXD10P28358 340 aa19.4■□□□□ 0.7
LINC01116-202ENST00000339037 CTGFP29279 349 aa19.4■□□□□ 0.7
LINC01116-202ENST00000339037 ADORA1P30542 326 aa19.4■□□□□ 0.7
LINC01116-202ENST00000339037 RGS3P49796 1198 aa19.4■□□□□ 0.7
LINC01116-202ENST00000339037 DZIP1Q86YF9 867 aaKnown RBP19.4■□□□□ 0.7
LINC01116-202ENST00000339037 TRMT2AQ8IZ69 625 aaKnown RBP19.4■□□□□ 0.7
LINC01116-202ENST00000339037 RAET1EQ8TD07 263 aa19.4■□□□□ 0.7
LINC01116-202ENST00000339037 IDI2Q9BXS1 227 aa19.4■□□□□ 0.7
LINC01116-202ENST00000339037 COPRSQ9NQ92 184 aa19.4■□□□□ 0.7
LINC01116-202ENST00000339037 TRIOBPQ9H2D6 2365 aa19.4■□□□□ 0.7
LINC01116-202ENST00000339037 ENTPD3O75355 529 aa19.39■□□□□ 0.69
LINC01116-202ENST00000339037 RASGRF1Q13972 1273 aa19.39■□□□□ 0.69
LINC01116-202ENST00000339037 ZSCAN29Q8IWY8 852 aaPredicted RBP19.39■□□□□ 0.69
LINC01116-202ENST00000339037 MEIS3Q99687 375 aa19.39■□□□□ 0.69
LINC01116-202ENST00000339037 PICK1Q9NRD5 415 aa19.39■□□□□ 0.69
LINC01116-202ENST00000339037 ABCF2Q9UG63 623 aa19.39■□□□□ 0.69
LINC01116-202ENST00000339037 ZHX2Q9Y6X8 837 aa19.39■□□□□ 0.69
LINC01116-202ENST00000339037 GAKO14976 1311 aa19.39■□□□□ 0.69
LINC01116-202ENST00000339037 RFX7Q2KHR2 1363 aa19.39■□□□□ 0.69
LINC01116-202ENST00000339037 PHF20L1A8MW92 1017 aa19.38■□□□□ 0.69
LINC01116-202ENST00000339037 MTFR1Q15390 333 aa19.38■□□□□ 0.69
LINC01116-202ENST00000339037 PDS5AQ29RF7 1337 aaKnown RBP19.38■□□□□ 0.69
LINC01116-202ENST00000339037 GPAT2Q6NUI2 795 aa19.38■□□□□ 0.69
LINC01116-202ENST00000339037 MYPNQ86TC9 1320 aa19.38■□□□□ 0.69
LINC01116-202ENST00000339037 SLF2Q8IX21 1173 aa19.38■□□□□ 0.69
LINC01116-202ENST00000339037 SCYL3Q8IZE3 742 aa19.38■□□□□ 0.69
LINC01116-202ENST00000339037 CYP2C8P10632 490 aa19.37■□□□□ 0.69
LINC01116-202ENST00000339037 GRK4P32298 578 aa19.37■□□□□ 0.69
LINC01116-202ENST00000339037 FASTKD5Q7L8L6 764 aaKnown RBP19.37■□□□□ 0.69
LINC01116-202ENST00000339037 A0A0G2JLL6 359 aaPredicted RBP19.36■□□□□ 0.69
LINC01116-202ENST00000339037 BCRP11274 1271 aa19.36■□□□□ 0.69
LINC01116-202ENST00000339037 PTPRAP18433 802 aa19.36■□□□□ 0.69
LINC01116-202ENST00000339037 FCGRTP55899 365 aa19.36■□□□□ 0.69
LINC01116-202ENST00000339037 TIMM10P62072 90 aa19.36■□□□□ 0.69
LINC01116-202ENST00000339037 SPTY2D1Q68D10 685 aaPredicted RBP19.36■□□□□ 0.69
LINC01116-202ENST00000339037 SH3BP5LQ7L8J4 393 aa19.36■□□□□ 0.69
LINC01116-202ENST00000339037 PRRT2Q7Z6L0 340 aaPredicted RBP19.36■□□□□ 0.69
LINC01116-202ENST00000339037 MIER1Q8N108 512 aa19.36■□□□□ 0.69
LINC01116-202ENST00000339037 SHISA4Q96DD7 197 aa19.36■□□□□ 0.69
LINC01116-202ENST00000339037 DOCK2Q92608 1830 aa19.36■□□□□ 0.69
LINC01116-202ENST00000339037 A0A1B0GUL7 405 aa19.35■□□□□ 0.69
LINC01116-202ENST00000339037 CCER2I3L3R5 266 aa19.35■□□□□ 0.69
LINC01116-202ENST00000339037 SRGAP3O43295 1099 aa19.35■□□□□ 0.69
LINC01116-202ENST00000339037 BTDP43251 543 aa19.35■□□□□ 0.69
LINC01116-202ENST00000339037 PRKCZQ05513 592 aa19.35■□□□□ 0.69
LINC01116-202ENST00000339037 PICALMQ13492 652 aa19.35■□□□□ 0.69
LINC01116-202ENST00000339037 MVPQ14764 893 aaKnown RBP19.35■□□□□ 0.69
LINC01116-202ENST00000339037 NKX2-3Q8TAU0 364 aa19.35■□□□□ 0.69
LINC01116-202ENST00000339037 SPOCK2Q92563 424 aa19.35■□□□□ 0.69
LINC01116-202ENST00000339037 FAM163AQ96GL9 167 aaPredicted RBP19.35■□□□□ 0.69
LINC01116-202ENST00000339037 BIN2Q9UBW5 565 aaPredicted RBP19.35■□□□□ 0.69
LINC01116-202ENST00000339037 COLQQ9Y215 455 aaPredicted RBP19.35■□□□□ 0.69
LINC01116-202ENST00000339037 AKAP2Q9Y2D5 859 aa19.35■□□□□ 0.69
LINC01116-202ENST00000339037 MYH2Q9UKX2 1941 aa19.35■□□□□ 0.69
LINC01116-202ENST00000339037 MROH7-TTC4A0A0A0MT08 1334 aa19.34■□□□□ 0.69
LINC01116-202ENST00000339037 DDTLA6NHG4 134 aaPredicted RBP19.34■□□□□ 0.69
LINC01116-202ENST00000339037 H0YGN5 161 aa19.34■□□□□ 0.69
LINC01116-202ENST00000339037 GNAI3P08754 354 aa19.34■□□□□ 0.69
LINC01116-202ENST00000339037 FXR1P51114 621 aaKnown RBP eCLIP19.34■□□□□ 0.69
LINC01116-202ENST00000339037 MAP3K10Q02779 954 aa19.34■□□□□ 0.69
LINC01116-202ENST00000339037 GADL1Q6ZQY3 521 aa19.34■□□□□ 0.69
LINC01116-202ENST00000339037 XAGE2Q96GT9 111 aa19.34■□□□□ 0.69
LINC01116-202ENST00000339037 DDX4Q9NQI0 724 aaKnown RBP19.34■□□□□ 0.69
LINC01116-202ENST00000339037 AFG3L2Q9Y4W6 797 aa19.34■□□□□ 0.69
LINC01116-202ENST00000339037 CTNND1O60716 968 aaKnown RBP19.33■□□□□ 0.68
LINC01116-202ENST00000339037 CCL5P13501 91 aa19.33■□□□□ 0.68
LINC01116-202ENST00000339037 TFCP2Q12800 502 aa19.33■□□□□ 0.68
LINC01116-202ENST00000339037 SLC45A1Q9Y2W3 748 aa19.33■□□□□ 0.68
LINC01116-202ENST00000339037 LAMA3Q16787 3333 aa19.33■□□□□ 0.68
LINC01116-202ENST00000339037 TRIM75PA6NK02 468 aa19.32■□□□□ 0.68
LINC01116-202ENST00000339037 GJB1P08034 283 aa19.32■□□□□ 0.68
LINC01116-202ENST00000339037 GJA8P48165 433 aa19.32■□□□□ 0.68
LINC01116-202ENST00000339037 RARSP54136 660 aaKnown RBP19.32■□□□□ 0.68
LINC01116-202ENST00000339037 UBXN2AP68543 259 aa19.32■□□□□ 0.68
LINC01116-202ENST00000339037 MECOMQ03112 1051 aa19.32■□□□□ 0.68
LINC01116-202ENST00000339037 MTX1Q13505 466 aa19.32■□□□□ 0.68
LINC01116-202ENST00000339037 ERICH6Q7L0X2 663 aa19.32■□□□□ 0.68
LINC01116-202ENST00000339037 SLAIN1Q8ND83 568 aa19.32■□□□□ 0.68
LINC01116-202ENST00000339037 SMCR8Q8TEV9 937 aaPredicted RBP19.32■□□□□ 0.68
LINC01116-202ENST00000339037 RNF208Q9H0X6 261 aa19.32■□□□□ 0.68
LINC01116-202ENST00000339037 GPR75-ASB3A0A0A6YYF3 556 aa19.31■□□□□ 0.68
LINC01116-202ENST00000339037 SLURP2P0DP57 97 aa19.31■□□□□ 0.68
LINC01116-202ENST00000339037 ARHGAP45Q92619 1136 aa19.31■□□□□ 0.68
LINC01116-202ENST00000339037 RHBDL3P58872 404 aa19.3■□□□□ 0.68
LINC01116-202ENST00000339037 DPF3Q92784 378 aa19.3■□□□□ 0.68
LINC01116-202ENST00000339037 NEUROD6Q96NK8 337 aa19.3■□□□□ 0.68
LINC01116-202ENST00000339037 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.3■□□□□ 0.68
LINC01116-202ENST00000339037 GABRQQ9UN88 632 aa19.3■□□□□ 0.68
LINC01116-202ENST00000339037 DOCK1Q14185 1865 aa19.29■□□□□ 0.68
LINC01116-202ENST00000339037 TNPO2O14787 897 aaKnown RBP19.29■□□□□ 0.68
LINC01116-202ENST00000339037 GSTO1P78417 241 aa19.29■□□□□ 0.68
LINC01116-202ENST00000339037 GORABQ5T7V8 394 aa19.29■□□□□ 0.68
LINC01116-202ENST00000339037 PI16Q6UXB8 463 aa19.29■□□□□ 0.68
LINC01116-202ENST00000339037 ZNF384Q8TF68 577 aa19.29■□□□□ 0.68
LINC01116-202ENST00000339037 HMG20BQ9P0W2 317 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms