RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 RGS3P49796 1198 aa13.14□□□□□ -0.31
CAPN3-202ENST00000337571 HNRNPUQ00839 825 aaKnown RBP eCLIP13.14□□□□□ -0.31
CAPN3-202ENST00000337571 OS9Q13438 667 aaPredicted RBP13.14□□□□□ -0.31
CAPN3-202ENST00000337571 FAM163AQ96GL9 167 aaPredicted RBP13.14□□□□□ -0.31
CAPN3-202ENST00000337571 TMEM106CQ9BVX2 250 aa13.14□□□□□ -0.31
CAPN3-202ENST00000337571 IDI2Q9BXS1 227 aa13.14□□□□□ -0.31
CAPN3-202ENST00000337571 PICK1Q9NRD5 415 aa13.14□□□□□ -0.31
CAPN3-202ENST00000337571 GNRH1P01148 92 aa13.13□□□□□ -0.31
CAPN3-202ENST00000337571 BTDP43251 543 aa13.13□□□□□ -0.31
CAPN3-202ENST00000337571 MECOMQ03112 1051 aa13.13□□□□□ -0.31
CAPN3-202ENST00000337571 SLC9C1Q4G0N8 1177 aa13.13□□□□□ -0.31
CAPN3-202ENST00000337571 ANKRD23Q86SG2 305 aa13.13□□□□□ -0.31
CAPN3-202ENST00000337571 ZFPM1Q8IX07 1006 aa13.13□□□□□ -0.31
CAPN3-202ENST00000337571 FTSJ3Q8IY81 847 aaKnown RBP13.13□□□□□ -0.31
CAPN3-202ENST00000337571 SPATA5Q8NB90 893 aa13.13□□□□□ -0.31
CAPN3-202ENST00000337571 NOL10Q9BSC4 688 aaKnown RBP13.13□□□□□ -0.31
CAPN3-202ENST00000337571 HTTP42858 3142 aa13.13□□□□□ -0.31
CAPN3-202ENST00000337571 GAKO14976 1311 aa13.13□□□□□ -0.31
CAPN3-202ENST00000337571 PDHXO00330 501 aa13.12□□□□□ -0.31
CAPN3-202ENST00000337571 UQCRFS1P1P0C7P4 283 aa13.12□□□□□ -0.31
CAPN3-202ENST00000337571 PICALMQ13492 652 aa13.12□□□□□ -0.31
CAPN3-202ENST00000337571 NOL9Q5SY16 702 aaKnown RBP13.12□□□□□ -0.31
CAPN3-202ENST00000337571 TMEM57Q8N5G2 664 aa13.12□□□□□ -0.31
CAPN3-202ENST00000337571 ARMC5Q96C12 935 aa13.12□□□□□ -0.31
CAPN3-202ENST00000337571 RAI14Q9P0K7 980 aa13.12□□□□□ -0.31
CAPN3-202ENST00000337571 HMG20BQ9P0W2 317 aa13.12□□□□□ -0.31
CAPN3-202ENST00000337571 LRP2BPQ9P2M1 347 aa13.12□□□□□ -0.31
CAPN3-202ENST00000337571 MROH7-TTC4A0A0A0MT08 1334 aa13.12□□□□□ -0.31
CAPN3-202ENST00000337571 GPR75-ASB3A0A0A6YYF3 556 aa13.11□□□□□ -0.31
CAPN3-202ENST00000337571 PNMA6EA0A0J9YXQ4 647 aa13.11□□□□□ -0.31
CAPN3-202ENST00000337571 CXCL11O14625 94 aa13.11□□□□□ -0.31
CAPN3-202ENST00000337571 MAP4K4O95819 1239 aaPredicted RBP13.11□□□□□ -0.31
CAPN3-202ENST00000337571 HOXD10P28358 340 aa13.11□□□□□ -0.31
CAPN3-202ENST00000337571 LACTBP83111 547 aaPredicted RBP13.11□□□□□ -0.31
CAPN3-202ENST00000337571 CCDC158Q5M9N0 1113 aa13.11□□□□□ -0.31
CAPN3-202ENST00000337571 PRPF38BQ5VTL8 546 aaKnown RBP13.11□□□□□ -0.31
CAPN3-202ENST00000337571 FASTKD5Q7L8L6 764 aaKnown RBP13.11□□□□□ -0.31
CAPN3-202ENST00000337571 SCYL3Q8IZE3 742 aa13.11□□□□□ -0.31
CAPN3-202ENST00000337571 KCNH4Q9UQ05 1017 aa13.11□□□□□ -0.31
CAPN3-202ENST00000337571 TNNQ9UQP3 1299 aa13.11□□□□□ -0.31
CAPN3-202ENST00000337571 ZHX2Q9Y6X8 837 aa13.11□□□□□ -0.31
CAPN3-202ENST00000337571 CTNND1O60716 968 aaKnown RBP13.1□□□□□ -0.31
CAPN3-202ENST00000337571 FMNL1O95466 1100 aaPredicted RBP13.1□□□□□ -0.31
CAPN3-202ENST00000337571 PRMT2P55345 433 aa13.1□□□□□ -0.31
CAPN3-202ENST00000337571 SLC4A8Q2Y0W8 1093 aa13.1□□□□□ -0.31
CAPN3-202ENST00000337571 TTC39AQ5SRH9 613 aa13.1□□□□□ -0.31
CAPN3-202ENST00000337571 DIEXFQ68CQ4 756 aaKnown RBP13.1□□□□□ -0.31
CAPN3-202ENST00000337571 TBC1D9Q6ZT07 1266 aa13.1□□□□□ -0.31
CAPN3-202ENST00000337571 MIER1Q8N108 512 aa13.1□□□□□ -0.31
CAPN3-202ENST00000337571 CPA4Q9UI42 421 aa13.1□□□□□ -0.31
CAPN3-202ENST00000337571 FARP1Q9Y4F1 1045 aaPredicted RBP13.1□□□□□ -0.31
CAPN3-202ENST00000337571 PTCH2Q9Y6C5 1203 aa13.1□□□□□ -0.31
CAPN3-202ENST00000337571 DOCK2Q92608 1830 aa13.1□□□□□ -0.31
CAPN3-202ENST00000337571 POTEFA5A3E0 1075 aa13.09□□□□□ -0.31
CAPN3-202ENST00000337571 DDTLA6NHG4 134 aaPredicted RBP13.09□□□□□ -0.31
CAPN3-202ENST00000337571 PHF20L1A8MW92 1017 aa13.09□□□□□ -0.31
CAPN3-202ENST00000337571 HAX1O00165 279 aa13.09□□□□□ -0.31
CAPN3-202ENST00000337571 SURF6O75683 361 aaKnown RBP13.09□□□□□ -0.31
CAPN3-202ENST00000337571 ECM2O94769 699 aaPredicted RBP13.09□□□□□ -0.31
CAPN3-202ENST00000337571 BAG3O95817 575 aa13.09□□□□□ -0.31
CAPN3-202ENST00000337571 ARID4AP29374 1257 aaPredicted RBP13.09□□□□□ -0.31
CAPN3-202ENST00000337571 PSMC4P43686 418 aa13.09□□□□□ -0.31
CAPN3-202ENST00000337571 ATP8B2P98198 1209 aa13.09□□□□□ -0.31
CAPN3-202ENST00000337571 C17orf99Q6UX52 265 aa13.09□□□□□ -0.31
CAPN3-202ENST00000337571 ITPRIPQ8IWB1 547 aa13.09□□□□□ -0.31
CAPN3-202ENST00000337571 NSUN4Q96CB9 384 aaKnown RBP13.09□□□□□ -0.31
CAPN3-202ENST00000337571 PARK7Q99497 189 aaKnown RBP13.09□□□□□ -0.31
CAPN3-202ENST00000337571 GPR108Q9NPR9 543 aa13.09□□□□□ -0.31
CAPN3-202ENST00000337571 PTPRAP18433 802 aa13.08□□□□□ -0.32
CAPN3-202ENST00000337571 EN2P19622 333 aaPredicted RBP13.08□□□□□ -0.32
CAPN3-202ENST00000337571 CAP1Q01518 475 aa13.08□□□□□ -0.32
CAPN3-202ENST00000337571 MAP3K10Q02779 954 aa13.08□□□□□ -0.32
CAPN3-202ENST00000337571 PI16Q6UXB8 463 aa13.08□□□□□ -0.32
CAPN3-202ENST00000337571 GADL1Q6ZQY3 521 aa13.08□□□□□ -0.32
CAPN3-202ENST00000337571 SH3BP5LQ7L8J4 393 aa13.08□□□□□ -0.32
CAPN3-202ENST00000337571 ZNF333Q96JL9 665 aa13.08□□□□□ -0.32
CAPN3-202ENST00000337571 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.08□□□□□ -0.32
CAPN3-202ENST00000337571 DDX4Q9NQI0 724 aaKnown RBP13.08□□□□□ -0.32
CAPN3-202ENST00000337571 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.08□□□□□ -0.32
CAPN3-202ENST00000337571 TBC1D12O60347 775 aa13.07□□□□□ -0.32
CAPN3-202ENST00000337571 SLC34A2O95436 690 aa13.07□□□□□ -0.32
CAPN3-202ENST00000337571 MYCP01106 439 aaPredicted RBP13.07□□□□□ -0.32
CAPN3-202ENST00000337571 MCAMP43121 646 aa13.07□□□□□ -0.32
CAPN3-202ENST00000337571 TNNI3KQ59H18 835 aa13.07□□□□□ -0.32
CAPN3-202ENST00000337571 NAA16Q6N069 864 aaPredicted RBP13.07□□□□□ -0.32
CAPN3-202ENST00000337571 TEX11Q8IYF3 940 aa13.07□□□□□ -0.32
CAPN3-202ENST00000337571 RAET1EQ8TD07 263 aa13.07□□□□□ -0.32
CAPN3-202ENST00000337571 SSH3Q8TE77 659 aa13.07□□□□□ -0.32
CAPN3-202ENST00000337571 ARHGAP39Q9C0H5 1083 aa13.07□□□□□ -0.32
CAPN3-202ENST00000337571 SNRKQ9NRH2 765 aa13.07□□□□□ -0.32
CAPN3-202ENST00000337571 AFG3L2Q9Y4W6 797 aa13.07□□□□□ -0.32
CAPN3-202ENST00000337571 FPGT-TNNI3KV9GXZ4 949 aa13.07□□□□□ -0.32
CAPN3-202ENST00000337571 A0A0G2JLL6 359 aaPredicted RBP13.06□□□□□ -0.32
CAPN3-202ENST00000337571 ZBTB7BO15156 539 aaPredicted RBP13.06□□□□□ -0.32
CAPN3-202ENST00000337571 CYP2C8P10632 490 aa13.06□□□□□ -0.32
CAPN3-202ENST00000337571 PLCG2P16885 1265 aa13.06□□□□□ -0.32
CAPN3-202ENST00000337571 RHBDL3P58872 404 aa13.06□□□□□ -0.32
CAPN3-202ENST00000337571 MOGSQ13724 837 aa13.06□□□□□ -0.32
CAPN3-202ENST00000337571 GPAT2Q6NUI2 795 aa13.06□□□□□ -0.32
CAPN3-202ENST00000337571 PRRT2Q7Z6L0 340 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms