RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 AXDND1Q5T1B0 1012 aaPredicted RBP18.95■□□□□ 0.62
CDC42EP4-201ENST00000335793 MAGEB6Q8N7X4 407 aa18.95■□□□□ 0.62
CDC42EP4-201ENST00000335793 RGPD5Q99666 1765 aa18.95■□□□□ 0.62
CDC42EP4-201ENST00000335793 ADD2P35612 726 aa18.95■□□□□ 0.62
CDC42EP4-201ENST00000335793 FBXO38Q6PIJ6 1188 aa18.95■□□□□ 0.62
CDC42EP4-201ENST00000335793 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.95■□□□□ 0.62
CDC42EP4-201ENST00000335793 FANCLQ9NW38 375 aa18.95■□□□□ 0.62
CDC42EP4-201ENST00000335793 KCNH3Q9ULD8 1083 aa18.95■□□□□ 0.62
CDC42EP4-201ENST00000335793 IQSEC3Q9UPP2 1182 aaPredicted RBP18.95■□□□□ 0.62
CDC42EP4-201ENST00000335793 TRIM22Q8IYM9 498 aa18.94■□□□□ 0.62
CDC42EP4-201ENST00000335793 OSBPL5Q9H0X9 879 aaPredicted RBP18.94■□□□□ 0.62
CDC42EP4-201ENST00000335793 HOOK1Q9UJC3 728 aaKnown RBP18.94■□□□□ 0.62
CDC42EP4-201ENST00000335793 MROH7-TTC4A0A0A0MT08 1334 aa18.94■□□□□ 0.62
CDC42EP4-201ENST00000335793 ZMYM6O95789 1325 aa18.94■□□□□ 0.62
CDC42EP4-201ENST00000335793 PDE6AP16499 860 aa18.94■□□□□ 0.62
CDC42EP4-201ENST00000335793 UBXN4Q92575 508 aa18.94■□□□□ 0.62
CDC42EP4-201ENST00000335793 MPHOSPH8Q99549 860 aa18.94■□□□□ 0.62
CDC42EP4-201ENST00000335793 ARMT1Q9H993 441 aa18.94■□□□□ 0.62
CDC42EP4-201ENST00000335793 BTBD18B2RXH4 712 aa18.94■□□□□ 0.62
CDC42EP4-201ENST00000335793 MBD4O95243 580 aa18.94■□□□□ 0.62
CDC42EP4-201ENST00000335793 LONRF3Q496Y0 759 aa18.94■□□□□ 0.62
CDC42EP4-201ENST00000335793 DPF2Q92785 391 aa18.94■□□□□ 0.62
CDC42EP4-201ENST00000335793 TSPYL1Q9H0U9 437 aa18.94■□□□□ 0.62
CDC42EP4-201ENST00000335793 PCDHA5Q9Y5H7 936 aa18.94■□□□□ 0.62
CDC42EP4-201ENST00000335793 MINDY4BA8MYZ0 360 aa18.93■□□□□ 0.62
CDC42EP4-201ENST00000335793 PSEN1P49768 467 aa18.93■□□□□ 0.62
CDC42EP4-201ENST00000335793 SHC4Q6S5L8 630 aa18.93■□□□□ 0.62
CDC42EP4-201ENST00000335793 MRC1P22897 1456 aa18.93■□□□□ 0.62
CDC42EP4-201ENST00000335793 EVCP57679 992 aa18.93■□□□□ 0.62
CDC42EP4-201ENST00000335793 AKAP17AQ02040 695 aaKnown RBP18.93■□□□□ 0.62
CDC42EP4-201ENST00000335793 SYCP1Q15431 976 aa18.93■□□□□ 0.62
CDC42EP4-201ENST00000335793 ZNF827Q17R98 1081 aa18.93■□□□□ 0.62
CDC42EP4-201ENST00000335793 KLHL10Q6JEL2 608 aa18.93■□□□□ 0.62
CDC42EP4-201ENST00000335793 TTLL11Q8NHH1 800 aa18.93■□□□□ 0.62
CDC42EP4-201ENST00000335793 WDR17Q8IZU2 1322 aa18.93■□□□□ 0.62
CDC42EP4-201ENST00000335793 MAP3K12Q12852 859 aa18.92■□□□□ 0.62
CDC42EP4-201ENST00000335793 E2F4Q16254 413 aa18.92■□□□□ 0.62
CDC42EP4-201ENST00000335793 MFSD6Q6ZSS7 791 aa18.92■□□□□ 0.62
CDC42EP4-201ENST00000335793 MIGA1Q8NAN2 632 aa18.92■□□□□ 0.62
CDC42EP4-201ENST00000335793 BANK1Q8NDB2 785 aa18.92■□□□□ 0.62
CDC42EP4-201ENST00000335793 NKX2-3Q8TAU0 364 aa18.92■□□□□ 0.62
CDC42EP4-201ENST00000335793 C5P01031 1676 aa18.92■□□□□ 0.62
CDC42EP4-201ENST00000335793 SPATA31A3Q5VYP0 1347 aa18.92■□□□□ 0.62
CDC42EP4-201ENST00000335793 SH2B2O14492 632 aaPredicted RBP18.92■□□□□ 0.62
CDC42EP4-201ENST00000335793 ARHGAP29Q52LW3 1261 aa18.92■□□□□ 0.62
CDC42EP4-201ENST00000335793 FOXN1O15353 648 aa18.92■□□□□ 0.62
CDC42EP4-201ENST00000335793 TRMT44Q8IYL2 757 aaKnown RBP18.92■□□□□ 0.62
CDC42EP4-201ENST00000335793 ABCF2Q9UG63 623 aa18.92■□□□□ 0.62
CDC42EP4-201ENST00000335793 AFDNP55196 1824 aaKnown RBP18.91■□□□□ 0.62
CDC42EP4-201ENST00000335793 POLR2DO15514 142 aaKnown RBP18.91■□□□□ 0.62
CDC42EP4-201ENST00000335793 ZSWIM5Q9P217 1185 aa18.91■□□□□ 0.62
CDC42EP4-201ENST00000335793 LRP2BPQ9P2M1 347 aa18.91■□□□□ 0.62
CDC42EP4-201ENST00000335793 TMEM232C9JQI7 657 aa18.91■□□□□ 0.62
CDC42EP4-201ENST00000335793 DIS3L2Q8IYB7 885 aaKnown RBP18.91■□□□□ 0.62
CDC42EP4-201ENST00000335793 PDE8BO95263 885 aa18.91■□□□□ 0.62
CDC42EP4-201ENST00000335793 CTSWP56202 376 aa18.91■□□□□ 0.62
CDC42EP4-201ENST00000335793 NCAPHQ15003 741 aa18.91■□□□□ 0.62
CDC42EP4-201ENST00000335793 KRI1Q8N9T8 703 aaKnown RBP18.91■□□□□ 0.62
CDC42EP4-201ENST00000335793 TMEM87BQ96K49 555 aa18.91■□□□□ 0.62
CDC42EP4-201ENST00000335793 RIPOR2Q9Y4F9 1068 aa18.91■□□□□ 0.62
CDC42EP4-201ENST00000335793 NEDD4P46934 1319 aa18.9■□□□□ 0.62
CDC42EP4-201ENST00000335793 CPLX3Q8WVH0 158 aa18.9■□□□□ 0.62
CDC42EP4-201ENST00000335793 ZCCHC17Q9NP64 241 aaKnown RBP18.9■□□□□ 0.62
CDC42EP4-201ENST00000335793 USP54Q70EL1 1684 aa18.9■□□□□ 0.62
CDC42EP4-201ENST00000335793 CLGNO14967 610 aa18.9■□□□□ 0.62
CDC42EP4-201ENST00000335793 CCP110O43303 1012 aa18.9■□□□□ 0.62
CDC42EP4-201ENST00000335793 FAM193AP78312 1265 aa18.9■□□□□ 0.62
CDC42EP4-201ENST00000335793 GIGYF2Q6Y7W6 1299 aaKnown RBP18.9■□□□□ 0.62
CDC42EP4-201ENST00000335793 NLRP10Q86W26 655 aa18.9■□□□□ 0.62
CDC42EP4-201ENST00000335793 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.9■□□□□ 0.62
CDC42EP4-201ENST00000335793 NACAP1Q9BZK3 213 aa18.9■□□□□ 0.62
CDC42EP4-201ENST00000335793 FBXO3Q9UK99 471 aa18.9■□□□□ 0.62
CDC42EP4-201ENST00000335793 PRKAB2O43741 272 aa18.89■□□□□ 0.62
CDC42EP4-201ENST00000335793 SAMD1Q6SPF0 538 aaPredicted RBP18.89■□□□□ 0.62
CDC42EP4-201ENST00000335793 GRAMD1CQ8IYS0 662 aa18.89■□□□□ 0.62
CDC42EP4-201ENST00000335793 IFNL3Q8IZI9 196 aa18.89■□□□□ 0.62
CDC42EP4-201ENST00000335793 TEX13AQ9BXU3 409 aaPredicted RBP18.89■□□□□ 0.62
CDC42EP4-201ENST00000335793 SLC4A4Q9Y6R1 1079 aa18.89■□□□□ 0.62
CDC42EP4-201ENST00000335793 CYP2C19P33261 490 aa18.89■□□□□ 0.61
CDC42EP4-201ENST00000335793 GNG11P61952 73 aa18.89■□□□□ 0.61
CDC42EP4-201ENST00000335793 WTAPQ15007 396 aa18.89■□□□□ 0.61
CDC42EP4-201ENST00000335793 RTN1Q16799 776 aa18.89■□□□□ 0.61
CDC42EP4-201ENST00000335793 PIGBQ92521 554 aa18.89■□□□□ 0.61
CDC42EP4-201ENST00000335793 BPIFA3Q9BQP9 254 aa18.89■□□□□ 0.61
CDC42EP4-201ENST00000335793 GEMIN8Q9NWZ8 242 aaKnown RBP18.89■□□□□ 0.61
CDC42EP4-201ENST00000335793 hCG_1642624A0A1W2PR95 340 aa18.89■□□□□ 0.61
CDC42EP4-201ENST00000335793 ANKRD65E5RJM6 399 aa18.89■□□□□ 0.61
CDC42EP4-201ENST00000335793 ETF1P62495 437 aaKnown RBP18.89■□□□□ 0.61
CDC42EP4-201ENST00000335793 TICAM2Q86XR7 235 aa18.89■□□□□ 0.61
CDC42EP4-201ENST00000335793 UBAC1Q9BSL1 405 aa18.89■□□□□ 0.61
CDC42EP4-201ENST00000335793 PSDA5PKW4 1024 aaPredicted RBP18.88■□□□□ 0.61
CDC42EP4-201ENST00000335793 IKBKBO14920 756 aa18.88■□□□□ 0.61
CDC42EP4-201ENST00000335793 CUTAO60888 179 aa18.88■□□□□ 0.61
CDC42EP4-201ENST00000335793 UQCRFS1P1P0C7P4 283 aa18.88■□□□□ 0.61
CDC42EP4-201ENST00000335793 ADKP55263 362 aaKnown RBP18.88■□□□□ 0.61
CDC42EP4-201ENST00000335793 SMARCE1Q969G3 411 aa18.88■□□□□ 0.61
CDC42EP4-201ENST00000335793 NFE2L3Q9Y4A8 694 aa18.88■□□□□ 0.61
CDC42EP4-201ENST00000335793 MYO1CO00159 1063 aa18.88■□□□□ 0.61
CDC42EP4-201ENST00000335793 PPP6R2O75170 966 aa18.88■□□□□ 0.61
CDC42EP4-201ENST00000335793 GUCY1A2P33402 732 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms