RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.03■■□□□ 1.92
NDEL1-201ENST00000334527 KRT23Q9C075 422 aa27.03■■□□□ 1.92
NDEL1-201ENST00000334527 XPO4Q9C0E2 1151 aaKnown RBP27.03■■□□□ 1.92
NDEL1-201ENST00000334527 IFNKQ9P0W0 207 aa27.03■■□□□ 1.92
NDEL1-201ENST00000334527 CEP135Q66GS9 1140 aa27.02■■□□□ 1.92
NDEL1-201ENST00000334527 ISM2Q6H9L7 571 aa27.02■■□□□ 1.92
NDEL1-201ENST00000334527 INTS5Q6P9B9 1019 aaKnown RBP27.02■■□□□ 1.92
NDEL1-201ENST00000334527 DNAJC5Q9H3Z4 198 aa27.02■■□□□ 1.92
NDEL1-201ENST00000334527 IMPACTQ9P2X3 320 aa27.02■■□□□ 1.92
NDEL1-201ENST00000334527 STK36Q9NRP7 1315 aa27.02■■□□□ 1.92
NDEL1-201ENST00000334527 TIAM2Q8IVF5 1701 aa27.02■■□□□ 1.92
NDEL1-201ENST00000334527 A0A0G2JS52 829 aa27.02■■□□□ 1.92
NDEL1-201ENST00000334527 TDO2P48775 406 aa27.02■■□□□ 1.92
NDEL1-201ENST00000334527 BCAMP50895 628 aa27.02■■□□□ 1.92
NDEL1-201ENST00000334527 RRP12Q5JTH9 1297 aaKnown RBP27.02■■□□□ 1.92
NDEL1-201ENST00000334527 LCORLQ8N3X6 602 aa27.02■■□□□ 1.92
NDEL1-201ENST00000334527 OSBPL5Q9H0X9 879 aaPredicted RBP27.02■■□□□ 1.92
NDEL1-201ENST00000334527 CCDC87Q9NVE4 849 aa27.02■■□□□ 1.92
NDEL1-201ENST00000334527 SLC4A4Q9Y6R1 1079 aa27.01■■□□□ 1.92
NDEL1-201ENST00000334527 FMNL1O95466 1100 aaPredicted RBP27.01■■□□□ 1.91
NDEL1-201ENST00000334527 NCAPHQ15003 741 aa27.01■■□□□ 1.91
NDEL1-201ENST00000334527 CLIC6Q96NY7 704 aa27.01■■□□□ 1.91
NDEL1-201ENST00000334527 NACAP1Q9BZK3 213 aa27.01■■□□□ 1.91
NDEL1-201ENST00000334527 TOMM22Q9NS69 142 aa27.01■■□□□ 1.91
NDEL1-201ENST00000334527 CCDC152Q4G0S7 254 aa27■■□□□ 1.91
NDEL1-201ENST00000334527 ANKRD7Q92527 254 aa27■■□□□ 1.91
NDEL1-201ENST00000334527 ZNF592Q92610 1267 aa27■■□□□ 1.91
NDEL1-201ENST00000334527 GNAT2P19087 354 aa27■■□□□ 1.91
NDEL1-201ENST00000334527 CRKLP46109 303 aaKnown RBP27■■□□□ 1.91
NDEL1-201ENST00000334527 RESP18Q5W5W9 173 aa27■■□□□ 1.91
NDEL1-201ENST00000334527 CCDC112Q8NEF3 446 aa27■■□□□ 1.91
NDEL1-201ENST00000334527 TUBE1Q9UJT0 475 aa27■■□□□ 1.91
NDEL1-201ENST00000334527 IGHMBP2P38935 993 aaKnown RBP26.99■■□□□ 1.91
NDEL1-201ENST00000334527 STAG1Q8WVM7 1258 aa26.99■■□□□ 1.91
NDEL1-201ENST00000334527 WASF1Q92558 559 aa26.99■■□□□ 1.91
NDEL1-201ENST00000334527 ZKSCAN3Q9BRR0 538 aa26.99■■□□□ 1.91
NDEL1-201ENST00000334527 IFNAR1P17181 557 aa26.99■■□□□ 1.91
NDEL1-201ENST00000334527 PTPN14Q15678 1187 aa26.99■■□□□ 1.91
NDEL1-201ENST00000334527 TMC6Q7Z403 805 aa26.99■■□□□ 1.91
NDEL1-201ENST00000334527 EIF4ENIF1Q9NRA8 985 aaKnown RBP26.99■■□□□ 1.91
NDEL1-201ENST00000334527 PNPLA7Q6ZV29 1317 aa26.99■■□□□ 1.91
NDEL1-201ENST00000334527 WNK3Q9BYP7 1800 aa26.99■■□□□ 1.91
NDEL1-201ENST00000334527 FAM237AA0A1B0GTK4 181 aa26.98■■□□□ 1.91
NDEL1-201ENST00000334527 CUTAO60888 179 aa26.98■■□□□ 1.91
NDEL1-201ENST00000334527 STK11IPQ8N1F8 1099 aa26.98■■□□□ 1.91
NDEL1-201ENST00000334527 TRMT1Q9NXH9 659 aaKnown RBP26.98■■□□□ 1.91
NDEL1-201ENST00000334527 IKBKBO14920 756 aa26.98■■□□□ 1.91
NDEL1-201ENST00000334527 GUCY1A2P33402 732 aa26.98■■□□□ 1.91
NDEL1-201ENST00000334527 ATP6V1AP38606 617 aa26.98■■□□□ 1.91
NDEL1-201ENST00000334527 PNOCQ13519 176 aa26.98■■□□□ 1.91
NDEL1-201ENST00000334527 SART3Q15020 963 aaKnown RBP26.98■■□□□ 1.91
NDEL1-201ENST00000334527 PARP10Q53GL7 1025 aa26.98■■□□□ 1.91
NDEL1-201ENST00000334527 NYAP1Q6ZVC0 841 aa26.98■■□□□ 1.91
NDEL1-201ENST00000334527 PDCL2Q8N4E4 241 aa26.98■■□□□ 1.91
NDEL1-201ENST00000334527 MIGA1Q8NAN2 632 aa26.98■■□□□ 1.91
NDEL1-201ENST00000334527 CAMTA2O94983 1202 aa26.97■■□□□ 1.91
NDEL1-201ENST00000334527 LMOD1P29536 600 aaPredicted RBP26.97■■□□□ 1.91
NDEL1-201ENST00000334527 WTAPQ15007 396 aa26.97■■□□□ 1.91
NDEL1-201ENST00000334527 NOSTRINQ8IVI9 506 aa26.97■■□□□ 1.91
NDEL1-201ENST00000334527 CCAR2Q8N163 923 aaKnown RBP26.97■■□□□ 1.91
NDEL1-201ENST00000334527 LRP2BPQ9P2M1 347 aa26.97■■□□□ 1.91
NDEL1-201ENST00000334527 NID2Q14112 1375 aa26.97■■□□□ 1.91
NDEL1-201ENST00000334527 PHLPP1O60346 1717 aa26.97■■□□□ 1.91
NDEL1-201ENST00000334527 RTN1Q16799 776 aa26.97■■□□□ 1.91
NDEL1-201ENST00000334527 PPP4R3BQ5MIZ7 849 aa26.96■■□□□ 1.91
NDEL1-201ENST00000334527 BCORQ6W2J9 1755 aa26.96■■□□□ 1.91
NDEL1-201ENST00000334527 COL16A1Q07092 1604 aaPredicted RBP26.96■■□□□ 1.91
NDEL1-201ENST00000334527 BTBD18B2RXH4 712 aa26.95■■□□□ 1.91
NDEL1-201ENST00000334527 MMP1P03956 469 aa26.95■■□□□ 1.91
NDEL1-201ENST00000334527 TRIM22Q8IYM9 498 aa26.95■■□□□ 1.91
NDEL1-201ENST00000334527 CCDC150Q8NCX0 1101 aa26.95■■□□□ 1.91
NDEL1-201ENST00000334527 NIP7Q9Y221 180 aaKnown RBP eCLIP26.95■■□□□ 1.91
NDEL1-201ENST00000334527 ERICH2A1L162 156 aa26.95■■□□□ 1.9
NDEL1-201ENST00000334527 NCBP1Q09161 790 aaKnown RBP26.95■■□□□ 1.9
NDEL1-201ENST00000334527 SAFBQ15424 915 aaKnown RBP eCLIP26.95■■□□□ 1.9
NDEL1-201ENST00000334527 KCNH3Q9ULD8 1083 aa26.95■■□□□ 1.9
NDEL1-201ENST00000334527 NTSR2O95665 410 aa26.94■■□□□ 1.9
NDEL1-201ENST00000334527 FANCCQ00597 558 aa26.94■■□□□ 1.9
NDEL1-201ENST00000334527 CHRNDQ07001 517 aa26.94■■□□□ 1.9
NDEL1-201ENST00000334527 LONRF3Q496Y0 759 aa26.94■■□□□ 1.9
NDEL1-201ENST00000334527 ARMCX5Q6P1M9 558 aa26.94■■□□□ 1.9
NDEL1-201ENST00000334527 ACSBG1Q96GR2 724 aa26.94■■□□□ 1.9
NDEL1-201ENST00000334527 KCND1Q9NSA2 647 aa26.94■■□□□ 1.9
NDEL1-201ENST00000334527 KCNJ14Q9UNX9 436 aa26.94■■□□□ 1.9
NDEL1-201ENST00000334527 METTL16Q86W50 562 aaKnown RBP26.94■■□□□ 1.9
NDEL1-201ENST00000334527 DIS3L2Q8IYB7 885 aaKnown RBP26.94■■□□□ 1.9
NDEL1-201ENST00000334527 CCDC82Q8N4S0 544 aa26.94■■□□□ 1.9
NDEL1-201ENST00000334527 KRI1Q8N9T8 703 aaKnown RBP26.94■■□□□ 1.9
NDEL1-201ENST00000334527 HSD3B7Q9H2F3 369 aa26.94■■□□□ 1.9
NDEL1-201ENST00000334527 RTL9Q8NET4 1388 aa26.94■■□□□ 1.9
NDEL1-201ENST00000334527 SYCP1Q15431 976 aa26.93■■□□□ 1.9
NDEL1-201ENST00000334527 CNNM3Q8NE01 707 aa26.93■■□□□ 1.9
NDEL1-201ENST00000334527 ATP1A3P13637 1013 aa26.93■■□□□ 1.9
NDEL1-201ENST00000334527 KRBA2Q6ZNG9 492 aa26.93■■□□□ 1.9
NDEL1-201ENST00000334527 IQSEC3Q9UPP2 1182 aaPredicted RBP26.93■■□□□ 1.9
NDEL1-201ENST00000334527 LOC102724428A0A0B4J2F2 783 aa26.92■■□□□ 1.9
NDEL1-201ENST00000334527 SFPQP23246 707 aaKnown RBP eCLIP26.92■■□□□ 1.9
NDEL1-201ENST00000334527 SIK1P57059 783 aa26.92■■□□□ 1.9
NDEL1-201ENST00000334527 MYL5Q02045 173 aa26.92■■□□□ 1.9
NDEL1-201ENST00000334527 CMTR1Q8N1G2 835 aaKnown RBP26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms