RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 ENTPD3O75355 529 aa11.79□□□□□ -0.52
SYN3-201ENST00000332840 MCAMP43121 646 aa11.79□□□□□ -0.52
SYN3-201ENST00000332840 INHBEP58166 350 aa11.79□□□□□ -0.52
SYN3-201ENST00000332840 CDC42EP5Q6NZY7 148 aa11.79□□□□□ -0.52
SYN3-201ENST00000332840 MOB2Q70IA6 237 aa11.79□□□□□ -0.52
SYN3-201ENST00000332840 AACSQ86V21 672 aa11.79□□□□□ -0.52
SYN3-201ENST00000332840 FAM151AQ8WW52 585 aa11.79□□□□□ -0.52
SYN3-201ENST00000332840 NOL10Q9BSC4 688 aaKnown RBP11.79□□□□□ -0.52
SYN3-201ENST00000332840 TMEM39BQ9GZU3 492 aa11.79□□□□□ -0.52
SYN3-201ENST00000332840 USP40Q9NVE5 1235 aa11.79□□□□□ -0.52
SYN3-201ENST00000332840 RNF186Q9NXI6 227 aa11.79□□□□□ -0.52
SYN3-201ENST00000332840 RAI14Q9P0K7 980 aa11.79□□□□□ -0.52
SYN3-201ENST00000332840 DBNLQ9UJU6 430 aaKnown RBP11.79□□□□□ -0.52
SYN3-201ENST00000332840 CSADQ9Y600 493 aa11.79□□□□□ -0.52
SYN3-201ENST00000332840 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.79□□□□□ -0.52
SYN3-201ENST00000332840 SSC5DA1L4H1 1573 aa11.79□□□□□ -0.52
SYN3-201ENST00000332840 PLCG2P16885 1265 aa11.78□□□□□ -0.52
SYN3-201ENST00000332840 PDE1AP54750 535 aa11.78□□□□□ -0.52
SYN3-201ENST00000332840 MECOMQ03112 1051 aa11.78□□□□□ -0.52
SYN3-201ENST00000332840 TTC22Q5TAA0 569 aa11.78□□□□□ -0.52
SYN3-201ENST00000332840 SPRYD7Q5W111 196 aa11.78□□□□□ -0.52
SYN3-201ENST00000332840 CERS3Q8IU89 383 aa11.78□□□□□ -0.52
SYN3-201ENST00000332840 EAF2Q96CJ1 260 aaPredicted RBP11.78□□□□□ -0.52
SYN3-201ENST00000332840 IDI2Q9BXS1 227 aa11.78□□□□□ -0.52
SYN3-201ENST00000332840 BCL11AQ9H165 835 aa11.78□□□□□ -0.52
SYN3-201ENST00000332840 STAP2Q9UGK3 403 aa11.78□□□□□ -0.52
SYN3-201ENST00000332840 KIAA0100Q14667 2235 aaKnown RBP11.77□□□□□ -0.53
SYN3-201ENST00000332840 GPR75-ASB3A0A0A6YYF3 556 aa11.77□□□□□ -0.53
SYN3-201ENST00000332840 MANSC4A6NHS7 340 aaPredicted RBP11.77□□□□□ -0.53
SYN3-201ENST00000332840 EIF5BO60841 1220 aaKnown RBP11.77□□□□□ -0.53
SYN3-201ENST00000332840 USP2O75604 605 aaPredicted RBP11.77□□□□□ -0.53
SYN3-201ENST00000332840 BAG3O95817 575 aa11.77□□□□□ -0.53
SYN3-201ENST00000332840 ALDH1A1P00352 501 aa11.77□□□□□ -0.53
SYN3-201ENST00000332840 IFIT2P09913 472 aaKnown RBP11.77□□□□□ -0.53
SYN3-201ENST00000332840 BTDP43251 543 aa11.77□□□□□ -0.53
SYN3-201ENST00000332840 CACNB3P54284 484 aa11.77□□□□□ -0.53
SYN3-201ENST00000332840 PI16Q6UXB8 463 aa11.77□□□□□ -0.53
SYN3-201ENST00000332840 OTUD7AQ8TE49 926 aaPredicted RBP11.77□□□□□ -0.53
SYN3-201ENST00000332840 NSUN4Q96CB9 384 aaKnown RBP11.77□□□□□ -0.53
SYN3-201ENST00000332840 CSRNP1Q96S65 589 aa11.77□□□□□ -0.53
SYN3-201ENST00000332840 IL1RAPL2Q9NP60 686 aa11.77□□□□□ -0.53
SYN3-201ENST00000332840 SALL3Q9BXA9 1300 aa11.77□□□□□ -0.53
SYN3-201ENST00000332840 CENPFP49454 3210 aa11.77□□□□□ -0.53
SYN3-201ENST00000332840 MX1P20591 662 aa11.76□□□□□ -0.53
SYN3-201ENST00000332840 ANP32AP39687 249 aaKnown RBP11.76□□□□□ -0.53
SYN3-201ENST00000332840 TM4SF4P48230 202 aa11.76□□□□□ -0.53
SYN3-201ENST00000332840 MAP3K9P80192 1104 aa11.76□□□□□ -0.53
SYN3-201ENST00000332840 TTF1Q15361 905 aaPredicted RBP11.76□□□□□ -0.53
SYN3-201ENST00000332840 OTUD7BQ6GQQ9 843 aa11.76□□□□□ -0.53
SYN3-201ENST00000332840 NAA16Q6N069 864 aaPredicted RBP11.76□□□□□ -0.53
SYN3-201ENST00000332840 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.76□□□□□ -0.53
SYN3-201ENST00000332840 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.76□□□□□ -0.53
SYN3-201ENST00000332840 WNK4Q96J92 1243 aa11.76□□□□□ -0.53
SYN3-201ENST00000332840 ZNF341Q9BYN7 854 aa11.76□□□□□ -0.53
SYN3-201ENST00000332840 CCDC8Q9H0W5 538 aaPredicted RBP11.76□□□□□ -0.53
SYN3-201ENST00000332840 UPF2Q9HAU5 1272 aaKnown RBP11.76□□□□□ -0.53
SYN3-201ENST00000332840 GSPT1P15170 499 aaKnown RBP11.75□□□□□ -0.53
SYN3-201ENST00000332840 MAP3K12Q12852 859 aa11.75□□□□□ -0.53
SYN3-201ENST00000332840 NFIAQ12857 509 aa11.75□□□□□ -0.53
SYN3-201ENST00000332840 TBC1D9Q6ZT07 1266 aa11.75□□□□□ -0.53
SYN3-201ENST00000332840 WRNIP1Q96S55 665 aa11.75□□□□□ -0.53
SYN3-201ENST00000332840 SNRKQ9NRH2 765 aa11.75□□□□□ -0.53
SYN3-201ENST00000332840 TLR7Q9NYK1 1049 aaKnown RBP11.75□□□□□ -0.53
SYN3-201ENST00000332840 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.75□□□□□ -0.53
SYN3-201ENST00000332840 FAM198AQ9UFP1 575 aa11.75□□□□□ -0.53
SYN3-201ENST00000332840 RFX7Q2KHR2 1363 aa11.75□□□□□ -0.53
SYN3-201ENST00000332840 CEP290O15078 2479 aa11.75□□□□□ -0.53
SYN3-201ENST00000332840 CDC45O75419 566 aa11.74□□□□□ -0.53
SYN3-201ENST00000332840 CYP2E1P05181 493 aaPredicted RBP11.74□□□□□ -0.53
SYN3-201ENST00000332840 ZAP70P43403 619 aa11.74□□□□□ -0.53
SYN3-201ENST00000332840 TCP10Q12799 353 aa11.74□□□□□ -0.53
SYN3-201ENST00000332840 MKRN3Q13064 507 aaKnown RBP11.74□□□□□ -0.53
SYN3-201ENST00000332840 VGLL4Q14135 290 aa11.74□□□□□ -0.53
SYN3-201ENST00000332840 NOM1Q5C9Z4 860 aaKnown RBP11.74□□□□□ -0.53
SYN3-201ENST00000332840 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.74□□□□□ -0.53
SYN3-201ENST00000332840 ERO1BQ86YB8 467 aa11.74□□□□□ -0.53
SYN3-201ENST00000332840 ZSCAN29Q8IWY8 852 aaPredicted RBP11.74□□□□□ -0.53
SYN3-201ENST00000332840 CDAN1Q8IWY9 1227 aa11.74□□□□□ -0.53
SYN3-201ENST00000332840 CLMNQ96JQ2 1002 aa11.74□□□□□ -0.53
SYN3-201ENST00000332840 CFHR5Q9BXR6 569 aa11.74□□□□□ -0.53
SYN3-201ENST00000332840 MKI67P46013 3256 aaKnown RBP11.73□□□□□ -0.53
SYN3-201ENST00000332840 SPDYE5A6NIY4 337 aa11.73□□□□□ -0.53
SYN3-201ENST00000332840 WDHD1O75717 1129 aaPredicted RBP11.73□□□□□ -0.53
SYN3-201ENST00000332840 IDH1O75874 414 aaKnown RBP11.73□□□□□ -0.53
SYN3-201ENST00000332840 TBC1D8O95759 1140 aa11.73□□□□□ -0.53
SYN3-201ENST00000332840 COL2A1P02458 1487 aaPredicted RBP11.73□□□□□ -0.53
SYN3-201ENST00000332840 GTF2A2P52657 109 aa11.73□□□□□ -0.53
SYN3-201ENST00000332840 RHBDL3P58872 404 aa11.73□□□□□ -0.53
SYN3-201ENST00000332840 PPP4CP60510 307 aa11.73□□□□□ -0.53
SYN3-201ENST00000332840 ATRNL1Q5VV63 1379 aa11.73□□□□□ -0.53
SYN3-201ENST00000332840 ECM29Q5VYK3 1845 aa11.73□□□□□ -0.53
SYN3-201ENST00000332840 TTC41PQ6P2S7 1318 aa11.73□□□□□ -0.53
SYN3-201ENST00000332840 CTU1Q7Z7A3 348 aaKnown RBP11.73□□□□□ -0.53
SYN3-201ENST00000332840 OPTNQ96CV9 577 aa11.73□□□□□ -0.53
SYN3-201ENST00000332840 GPATCH3Q96I76 525 aa11.73□□□□□ -0.53
SYN3-201ENST00000332840 DHX36Q9H2U1 1008 aaKnown RBP11.73□□□□□ -0.53
SYN3-201ENST00000332840 ELP3Q9H9T3 547 aa11.73□□□□□ -0.53
SYN3-201ENST00000332840 FZD1Q9UP38 647 aa11.73□□□□□ -0.53
SYN3-201ENST00000332840 HPS5Q9UPZ3 1129 aa11.73□□□□□ -0.53
SYN3-201ENST00000332840 ERC2O15083 957 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms