RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 SERPINB2P05120 415 aa10.89□□□□□ -0.67
SS18L1-201ENST00000331758 RBM26Q5T8P6 1007 aaKnown RBP10.89□□□□□ -0.67
SS18L1-201ENST00000331758 CLEC4GQ6UXB4 293 aa10.89□□□□□ -0.67
SS18L1-201ENST00000331758 KRI1Q8N9T8 703 aaKnown RBP10.89□□□□□ -0.67
SS18L1-201ENST00000331758 STK32BQ9NY57 414 aa10.89□□□□□ -0.67
SS18L1-201ENST00000331758 UBR1Q8IWV7 1749 aa10.89□□□□□ -0.67
SS18L1-201ENST00000331758 TNKSO95271 1327 aa10.89□□□□□ -0.67
SS18L1-201ENST00000331758 RPS6KA4O75676 772 aa10.89□□□□□ -0.67
SS18L1-201ENST00000331758 CYP2E1P05181 493 aaPredicted RBP10.89□□□□□ -0.67
SS18L1-201ENST00000331758 LCORLQ8N3X6 602 aa10.89□□□□□ -0.67
SS18L1-201ENST00000331758 C16orf45Q96MC5 204 aaPredicted RBP10.89□□□□□ -0.67
SS18L1-201ENST00000331758 RBM28Q9NW13 759 aaKnown RBP10.89□□□□□ -0.67
SS18L1-201ENST00000331758 RILPL1Q5EBL4 403 aa10.89□□□□□ -0.67
SS18L1-201ENST00000331758 CALML4Q96GE6 196 aa10.89□□□□□ -0.67
SS18L1-201ENST00000331758 VPS54Q9P1Q0 977 aa10.89□□□□□ -0.67
SS18L1-201ENST00000331758 H0YIN7 160 aa10.88□□□□□ -0.67
SS18L1-201ENST00000331758 CCP110O43303 1012 aa10.88□□□□□ -0.67
SS18L1-201ENST00000331758 KRT27Q7Z3Y8 459 aa10.88□□□□□ -0.67
SS18L1-201ENST00000331758 CUL5Q93034 780 aa10.88□□□□□ -0.67
SS18L1-201ENST00000331758 KDM4FA0A1W2PPD8 638 aa10.88□□□□□ -0.67
SS18L1-201ENST00000331758 VWA3AA6NCI4 1184 aa10.88□□□□□ -0.67
SS18L1-201ENST00000331758 TCP10Q12799 353 aa10.88□□□□□ -0.67
SS18L1-201ENST00000331758 MYSM1Q5VVJ2 828 aa10.88□□□□□ -0.67
SS18L1-201ENST00000331758 RRP36Q96EU6 259 aaKnown RBP10.88□□□□□ -0.67
SS18L1-201ENST00000331758 AFF2P51816 1311 aa10.88□□□□□ -0.67
SS18L1-201ENST00000331758 MYO1BO43795 1136 aa10.88□□□□□ -0.67
SS18L1-201ENST00000331758 TNNI2P48788 182 aa10.88□□□□□ -0.67
SS18L1-201ENST00000331758 DOK7Q18PE1 504 aa10.88□□□□□ -0.67
SS18L1-201ENST00000331758 CELF1Q92879 486 aaKnown RBP10.88□□□□□ -0.67
SS18L1-201ENST00000331758 PLIN2Q99541 437 aa10.88□□□□□ -0.67
SS18L1-201ENST00000331758 C6orf50Q9HD87 102 aa10.88□□□□□ -0.67
SS18L1-201ENST00000331758 GPCPD1Q9NPB8 672 aa10.88□□□□□ -0.67
SS18L1-201ENST00000331758 HDAC9Q9UKV0 1011 aa10.88□□□□□ -0.67
SS18L1-201ENST00000331758 COL15A1P39059 1388 aa10.88□□□□□ -0.67
SS18L1-201ENST00000331758 STAT6P42226 847 aa10.88□□□□□ -0.67
SS18L1-201ENST00000331758 NSUN7Q8NE18 718 aaKnown RBP10.88□□□□□ -0.67
SS18L1-201ENST00000331758 UBA5Q9GZZ9 404 aa10.88□□□□□ -0.67
SS18L1-201ENST00000331758 DEF6Q9H4E7 631 aa10.88□□□□□ -0.67
SS18L1-201ENST00000331758 CPDO75976 1380 aa10.87□□□□□ -0.67
SS18L1-201ENST00000331758 CDHR2Q9BYE9 1310 aa10.87□□□□□ -0.67
SS18L1-201ENST00000331758 PARP1P09874 1014 aaKnown RBP10.87□□□□□ -0.67
SS18L1-201ENST00000331758 UBASH3AP57075 661 aa10.87□□□□□ -0.67
SS18L1-201ENST00000331758 NKX1-1Q15270 411 aaPredicted RBP10.87□□□□□ -0.67
SS18L1-201ENST00000331758 PTPN14Q15678 1187 aa10.87□□□□□ -0.67
SS18L1-201ENST00000331758 TBC1D9BQ66K14 1250 aa10.87□□□□□ -0.67
SS18L1-201ENST00000331758 APOA5Q6Q788 366 aa10.87□□□□□ -0.67
SS18L1-201ENST00000331758 PIK3AP1Q6ZUJ8 805 aa10.87□□□□□ -0.67
SS18L1-201ENST00000331758 FANCBQ8NB91 859 aa10.87□□□□□ -0.67
SS18L1-201ENST00000331758 TTF2Q9UNY4 1162 aaKnown RBP10.87□□□□□ -0.67
SS18L1-201ENST00000331758 TERF1P54274 439 aa10.87□□□□□ -0.67
SS18L1-201ENST00000331758 GPR101Q96P66 508 aaPredicted RBP10.87□□□□□ -0.67
SS18L1-201ENST00000331758 CYP2D7A0A087X1C5 515 aa10.87□□□□□ -0.67
SS18L1-201ENST00000331758 STX17P56962 302 aa10.87□□□□□ -0.67
SS18L1-201ENST00000331758 CLSTN2Q9H4D0 955 aa10.87□□□□□ -0.67
SS18L1-201ENST00000331758 NARFQ9UHQ1 456 aa10.87□□□□□ -0.67
SS18L1-201ENST00000331758 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.87□□□□□ -0.67
SS18L1-201ENST00000331758 SPATA31A1Q5TZJ5 1347 aa10.87□□□□□ -0.67
SS18L1-201ENST00000331758 SCNN1DP51172 638 aa10.86□□□□□ -0.67
SS18L1-201ENST00000331758 RRAGBQ5VZM2 374 aa10.86□□□□□ -0.67
SS18L1-201ENST00000331758 CCDC70Q6NSX1 233 aa10.86□□□□□ -0.67
SS18L1-201ENST00000331758 FBXO18Q8NFZ0 1043 aa10.86□□□□□ -0.67
SS18L1-201ENST00000331758 TBC1D22AQ8WUA7 517 aa10.86□□□□□ -0.67
SS18L1-201ENST00000331758 RIPOR2Q9Y4F9 1068 aa10.86□□□□□ -0.67
SS18L1-201ENST00000331758 NR1I2O75469 434 aa10.86□□□□□ -0.67
SS18L1-201ENST00000331758 ATP2B4P23634 1241 aa10.86□□□□□ -0.67
SS18L1-201ENST00000331758 RFX5P48382 616 aaPredicted RBP10.86□□□□□ -0.67
SS18L1-201ENST00000331758 KDM6AO15550 1401 aaPredicted RBP10.86□□□□□ -0.67
SS18L1-201ENST00000331758 FSD2A1L4K1 749 aa10.86□□□□□ -0.67
SS18L1-201ENST00000331758 BTBD18B2RXH4 712 aa10.86□□□□□ -0.67
SS18L1-201ENST00000331758 LETM2Q2VYF4 491 aa10.86□□□□□ -0.67
SS18L1-201ENST00000331758 NOM1Q5C9Z4 860 aaKnown RBP10.86□□□□□ -0.67
SS18L1-201ENST00000331758 NLGN1Q8N2Q7 840 aa10.86□□□□□ -0.67
SS18L1-201ENST00000331758 ARHGEF1Q92888 912 aaKnown RBP10.86□□□□□ -0.67
SS18L1-201ENST00000331758 STRBPQ96SI9 672 aaKnown RBP10.86□□□□□ -0.67
SS18L1-201ENST00000331758 ZSCAN10Q96SZ4 725 aaPredicted RBP10.86□□□□□ -0.67
SS18L1-201ENST00000331758 BSDC1Q9NW68 430 aaPredicted RBP10.86□□□□□ -0.67
SS18L1-201ENST00000331758 ZSWIM5Q9P217 1185 aa10.86□□□□□ -0.67
SS18L1-201ENST00000331758 ARPP21Q9UBL0 812 aaPredicted RBP10.86□□□□□ -0.67
SS18L1-201ENST00000331758 KCNH3Q9ULD8 1083 aa10.86□□□□□ -0.67
SS18L1-201ENST00000331758 ZKSCAN5Q9Y2L8 839 aa10.86□□□□□ -0.67
SS18L1-201ENST00000331758 XDHP47989 1333 aa10.86□□□□□ -0.67
SS18L1-201ENST00000331758 PXDNLA1KZ92 1463 aa10.86□□□□□ -0.67
SS18L1-201ENST00000331758 ZNF202O95125 648 aa10.86□□□□□ -0.67
SS18L1-201ENST00000331758 GNA11P29992 359 aa10.86□□□□□ -0.67
SS18L1-201ENST00000331758 ALDH1B1P30837 517 aa10.86□□□□□ -0.67
SS18L1-201ENST00000331758 TNNT3P45378 269 aaPredicted RBP10.86□□□□□ -0.67
SS18L1-201ENST00000331758 KIAA0825Q8IV33 1275 aa10.86□□□□□ -0.67
SS18L1-201ENST00000331758 FTOQ9C0B1 505 aaKnown RBP eCLIP10.86□□□□□ -0.673e-9■■■■■ 30.4
SS18L1-201ENST00000331758 INCENPQ9NQS7 918 aa10.86□□□□□ -0.67
SS18L1-201ENST00000331758 DCCP43146 1447 aa10.85□□□□□ -0.67
SS18L1-201ENST00000331758 SHPRHQ149N8 1683 aa10.85□□□□□ -0.67
SS18L1-201ENST00000331758 C3P01024 1663 aa10.85□□□□□ -0.67
SS18L1-201ENST00000331758 TOB2Q14106 344 aaPredicted RBP10.85□□□□□ -0.67
SS18L1-201ENST00000331758 DIXDC1Q155Q3 683 aa10.85□□□□□ -0.67
SS18L1-201ENST00000331758 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.85□□□□□ -0.67
SS18L1-201ENST00000331758 JDP2Q8WYK2 163 aa10.85□□□□□ -0.67
SS18L1-201ENST00000331758 TTC14Q96N46 770 aa10.85□□□□□ -0.67
SS18L1-201ENST00000331758 MINPP1Q9UNW1 487 aa10.85□□□□□ -0.67
SS18L1-201ENST00000331758 ELP1O95163 1332 aa10.85□□□□□ -0.67
SS18L1-201ENST00000331758 ZMYM6O95789 1325 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms