RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 PTPRCP08575 1304 aa8.04□□□□□ -1.12
SMG1-201ENST00000330588 PASKQ96RG2 1323 aa8.04□□□□□ -1.12
SMG1-201ENST00000330588 ZIC2O95409 532 aaPredicted RBP8.04□□□□□ -1.12
SMG1-201ENST00000330588 RPS12P25398 132 aaKnown RBP8.04□□□□□ -1.12
SMG1-201ENST00000330588 LMOD1P29536 600 aaPredicted RBP8.04□□□□□ -1.12
SMG1-201ENST00000330588 MMP14P50281 582 aa8.04□□□□□ -1.12
SMG1-201ENST00000330588 CASP7P55210 303 aa8.04□□□□□ -1.12
SMG1-201ENST00000330588 FKBP5Q13451 457 aaPredicted RBP8.04□□□□□ -1.12
SMG1-201ENST00000330588 AOC3Q16853 763 aa8.04□□□□□ -1.12
SMG1-201ENST00000330588 G2E3Q7L622 706 aa8.04□□□□□ -1.12
SMG1-201ENST00000330588 ANKRD18AQ8IVF6 992 aa8.04□□□□□ -1.12
SMG1-201ENST00000330588 ARMC2Q8NEN0 867 aa8.04□□□□□ -1.12
SMG1-201ENST00000330588 DPF2Q92785 391 aa8.04□□□□□ -1.12
SMG1-201ENST00000330588 BSDC1Q9NW68 430 aaPredicted RBP8.04□□□□□ -1.12
SMG1-201ENST00000330588 COL4A1P02462 1669 aa8.04□□□□□ -1.12
SMG1-201ENST00000330588 XDHP47989 1333 aa8.03□□□□□ -1.12
SMG1-201ENST00000330588 CSF1RP07333 972 aa8.03□□□□□ -1.12
SMG1-201ENST00000330588 ATP2B4P23634 1241 aa8.03□□□□□ -1.12
SMG1-201ENST00000330588 SCNN1DP51172 638 aa8.03□□□□□ -1.12
SMG1-201ENST00000330588 CXCL9Q07325 125 aa8.03□□□□□ -1.12
SMG1-201ENST00000330588 SLFN5Q08AF3 891 aa8.03□□□□□ -1.12
SMG1-201ENST00000330588 ARID5BQ14865 1188 aa8.03□□□□□ -1.12
SMG1-201ENST00000330588 WASHC4Q2M389 1173 aa8.03□□□□□ -1.12
SMG1-201ENST00000330588 ALDH1L2Q3SY69 923 aa8.03□□□□□ -1.12
SMG1-201ENST00000330588 BEND3Q5T5X7 828 aa8.03□□□□□ -1.12
SMG1-201ENST00000330588 CIAPIN1Q6FI81 312 aa8.03□□□□□ -1.12
SMG1-201ENST00000330588 SH3BP5LQ7L8J4 393 aa8.03□□□□□ -1.12
SMG1-201ENST00000330588 TRMT2AQ8IZ69 625 aaKnown RBP8.03□□□□□ -1.12
SMG1-201ENST00000330588 ZSCAN1Q8NBB4 408 aa8.03□□□□□ -1.12
SMG1-201ENST00000330588 KLRG1Q96E93 195 aa8.03□□□□□ -1.12
SMG1-201ENST00000330588 GPRC5DQ9NZD1 345 aa8.03□□□□□ -1.12
SMG1-201ENST00000330588 MAP4K5Q9Y4K4 846 aa8.03□□□□□ -1.12
SMG1-201ENST00000330588 MED23Q9ULK4 1368 aa8.02□□□□□ -1.12
SMG1-201ENST00000330588 UTYO14607 1347 aa8.02□□□□□ -1.13
SMG1-201ENST00000330588 GPSM2P81274 684 aa8.02□□□□□ -1.13
SMG1-201ENST00000330588 CWF19L2Q2TBE0 894 aaKnown RBP8.02□□□□□ -1.13
SMG1-201ENST00000330588 RTL5Q5HYW3 569 aaPredicted RBP8.02□□□□□ -1.13
SMG1-201ENST00000330588 UBE3BQ7Z3V4 1068 aa8.02□□□□□ -1.13
SMG1-201ENST00000330588 HOMEZQ8IX15 550 aa8.02□□□□□ -1.13
SMG1-201ENST00000330588 TRMT44Q8IYL2 757 aaKnown RBP8.02□□□□□ -1.13
SMG1-201ENST00000330588 ADARB2Q9NS39 739 aaKnown RBP8.02□□□□□ -1.13
SMG1-201ENST00000330588 POLLQ9UGP5 575 aa8.02□□□□□ -1.13
SMG1-201ENST00000330588 PGAP2Q9UHJ9 254 aa8.02□□□□□ -1.13
SMG1-201ENST00000330588 GGA1Q9UJY5 639 aa8.02□□□□□ -1.13
SMG1-201ENST00000330588 FAM181BA6NEQ2 426 aa8.01□□□□□ -1.13
SMG1-201ENST00000330588 SOBPA7XYQ1 873 aa8.01□□□□□ -1.13
SMG1-201ENST00000330588 C15orf52Q6ZUT6 534 aaKnown RBP8.01□□□□□ -1.13
SMG1-201ENST00000330588 TBC1D16Q8TBP0 767 aa8.01□□□□□ -1.13
SMG1-201ENST00000330588 SEC31BQ9NQW1 1179 aa8.01□□□□□ -1.13
SMG1-201ENST00000330588 NSFL1CQ9UNZ2 370 aaKnown RBP8.01□□□□□ -1.13
SMG1-201ENST00000330588 LEMD3Q9Y2U8 911 aa8.01□□□□□ -1.13
SMG1-201ENST00000330588 YDJCA8MPS7 323 aa8.01□□□□□ -1.13
SMG1-201ENST00000330588 TCERG1O14776 1098 aaKnown RBP8.01□□□□□ -1.13
SMG1-201ENST00000330588 VIL1P09327 827 aaKnown RBP8.01□□□□□ -1.13
SMG1-201ENST00000330588 IGHMBP2P38935 993 aaKnown RBP8.01□□□□□ -1.13
SMG1-201ENST00000330588 AGERQ15109 404 aa8.01□□□□□ -1.13
SMG1-201ENST00000330588 PODNQ7Z5L7 613 aa8.01□□□□□ -1.13
SMG1-201ENST00000330588 MEIOBQ8N635 442 aa8.01□□□□□ -1.13
SMG1-201ENST00000330588 ZC3H12CQ9C0D7 883 aaKnown RBP8.01□□□□□ -1.13
SMG1-201ENST00000330588 ANKRD2Q9GZV1 360 aa8.01□□□□□ -1.13
SMG1-201ENST00000330588 UTRNP46939 3433 aa8□□□□□ -1.13
SMG1-201ENST00000330588 THSD7BQ9C0I4 1608 aa8□□□□□ -1.13
SMG1-201ENST00000330588 A0A1B0GUL6 1792 aa8□□□□□ -1.13
SMG1-201ENST00000330588 TRPM7Q96QT4 1865 aa8□□□□□ -1.13
SMG1-201ENST00000330588 GRM8O00222 908 aa8□□□□□ -1.13
SMG1-201ENST00000330588 ECE2O60344 883 aa8□□□□□ -1.13
SMG1-201ENST00000330588 UFL1O94874 794 aa8□□□□□ -1.13
SMG1-201ENST00000330588 ITGA6P23229 1130 aa8□□□□□ -1.13
SMG1-201ENST00000330588 EPS15P42566 896 aa8□□□□□ -1.13
SMG1-201ENST00000330588 AGBL3Q8NEM8 1001 aa8□□□□□ -1.13
SMG1-201ENST00000330588 SRCIN1Q9C0H9 1055 aa8□□□□□ -1.13
SMG1-201ENST00000330588 GREM2Q9H772 168 aa8□□□□□ -1.13
SMG1-201ENST00000330588 ANKIB1Q9P2G1 1089 aa8□□□□□ -1.13
SMG1-201ENST00000330588 MINPP1Q9UNW1 487 aa8□□□□□ -1.13
SMG1-201ENST00000330588 GJA3Q9Y6H8 435 aa8□□□□□ -1.13
SMG1-201ENST00000330588 ZNF646O15015 1829 aaPredicted RBP8□□□□□ -1.13
SMG1-201ENST00000330588 SPEF2Q9C093 1822 aa8□□□□□ -1.13
SMG1-201ENST00000330588 CNTNAP1P78357 1384 aa7.99□□□□□ -1.13
SMG1-201ENST00000330588 MYO3BQ8WXR4 1341 aa7.99□□□□□ -1.13
SMG1-201ENST00000330588 TMEM88BA6NKF7 163 aa7.99□□□□□ -1.13
SMG1-201ENST00000330588 H7C1D1 291 aa7.99□□□□□ -1.13
SMG1-201ENST00000330588 GMPSP49915 693 aaPredicted RBP7.99□□□□□ -1.13
SMG1-201ENST00000330588 FOXO4P98177 505 aa7.99□□□□□ -1.13
SMG1-201ENST00000330588 EAPPQ56P03 285 aaPredicted RBP7.99□□□□□ -1.13
SMG1-201ENST00000330588 SLC51AQ86UW1 340 aa7.99□□□□□ -1.13
SMG1-201ENST00000330588 CNTROBQ8N137 903 aa7.99□□□□□ -1.13
SMG1-201ENST00000330588 HELBQ8NG08 1087 aaPredicted RBP7.99□□□□□ -1.13
SMG1-201ENST00000330588 TSC1Q92574 1164 aa7.99□□□□□ -1.13
SMG1-201ENST00000330588 GPKOWQ92917 476 aaPredicted RBP eCLIP7.99□□□□□ -1.13
SMG1-201ENST00000330588 HHIPL1Q96JK4 782 aa7.99□□□□□ -1.13
SMG1-201ENST00000330588 COA1Q9GZY4 146 aa7.99□□□□□ -1.13
SMG1-201ENST00000330588 ANKRD18BA2A2Z9 1011 aa7.98□□□□□ -1.13
SMG1-201ENST00000330588 RASSF10A6NK89 507 aa7.98□□□□□ -1.13
SMG1-201ENST00000330588 F6X3S4 739 aa7.98□□□□□ -1.13
SMG1-201ENST00000330588 PSMD14O00487 310 aa7.98□□□□□ -1.13
SMG1-201ENST00000330588 CCT4P50991 539 aaKnown RBP7.98□□□□□ -1.13
SMG1-201ENST00000330588 IFIT5Q13325 482 aaKnown RBP7.98□□□□□ -1.13
SMG1-201ENST00000330588 RABL6Q3YEC7 729 aaPredicted RBP7.98□□□□□ -1.13
SMG1-201ENST00000330588 LINC00528Q8N1L1 170 aa7.98□□□□□ -1.13
SMG1-201ENST00000330588 MPHOSPH8Q99549 860 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms