RNA–Protein interactions for RNA: ENST00000329758.5

TRIM49-201, Transcript of tripartite motif containing 49, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM49, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-201ENST00000329758 NDUFB9Q9Y6M9 179 aa8.54□□□□□ -1.04
TRIM49-201ENST00000329758 GLI3P10071 1580 aa8.54□□□□□ -1.04
TRIM49-201ENST00000329758 FANCGO15287 622 aa8.54□□□□□ -1.04
TRIM49-201ENST00000329758 N4BP1O75113 896 aaKnown RBP8.54□□□□□ -1.04
TRIM49-201ENST00000329758 RNF40O75150 1001 aa8.54□□□□□ -1.04
TRIM49-201ENST00000329758 ARHGAP25P42331 645 aa8.54□□□□□ -1.04
TRIM49-201ENST00000329758 CABP4P57796 275 aa8.54□□□□□ -1.04
TRIM49-201ENST00000329758 TUBB2AQ13885 445 aa8.54□□□□□ -1.04
TRIM49-201ENST00000329758 CASP8Q14790 479 aa8.54□□□□□ -1.04
TRIM49-201ENST00000329758 KIF4BQ2VIQ3 1234 aa8.54□□□□□ -1.04
TRIM49-201ENST00000329758 LARP1Q6PKG0 1096 aaKnown RBP8.54□□□□□ -1.04
TRIM49-201ENST00000329758 CCDC50Q8IVM0 306 aa8.54□□□□□ -1.04
TRIM49-201ENST00000329758 TUBB2BQ9BVA1 445 aa8.54□□□□□ -1.04
TRIM49-201ENST00000329758 NAT10Q9H0A0 1025 aaKnown RBP8.54□□□□□ -1.04
TRIM49-201ENST00000329758 ATP6V0A4Q9HBG4 840 aa8.54□□□□□ -1.04
TRIM49-201ENST00000329758 BATF3Q9NR55 127 aa8.54□□□□□ -1.04
TRIM49-201ENST00000329758 CAPN7Q9Y6W3 813 aa8.54□□□□□ -1.04
TRIM49-201ENST00000329758 PXDNLA1KZ92 1463 aa8.53□□□□□ -1.04
TRIM49-201ENST00000329758 VPS37CA5D8V6 355 aaPredicted RBP8.53□□□□□ -1.04
TRIM49-201ENST00000329758 GRM8O00222 908 aa8.53□□□□□ -1.04
TRIM49-201ENST00000329758 MAFGO15525 162 aa8.53□□□□□ -1.04
TRIM49-201ENST00000329758 CAND2O75155 1236 aa8.53□□□□□ -1.04
TRIM49-201ENST00000329758 PRPF6O94906 941 aaKnown RBP8.53□□□□□ -1.04
TRIM49-201ENST00000329758 CHGBP05060 677 aa8.53□□□□□ -1.04
TRIM49-201ENST00000329758 CPA1P15085 419 aa8.53□□□□□ -1.04
TRIM49-201ENST00000329758 PDCP20941 246 aa8.53□□□□□ -1.04
TRIM49-201ENST00000329758 GCKP35557 465 aa8.53□□□□□ -1.04
TRIM49-201ENST00000329758 CCT5P48643 541 aa8.53□□□□□ -1.04
TRIM49-201ENST00000329758 AK2P54819 239 aa8.53□□□□□ -1.04
TRIM49-201ENST00000329758 TMC6Q7Z403 805 aa8.53□□□□□ -1.04
TRIM49-201ENST00000329758 SRGAP1Q7Z6B7 1085 aa8.53□□□□□ -1.04
TRIM49-201ENST00000329758 TTC5Q8N0Z6 440 aa8.53□□□□□ -1.04
TRIM49-201ENST00000329758 MICAL1Q8TDZ2 1067 aa8.53□□□□□ -1.04
TRIM49-201ENST00000329758 SPATA32Q96LK8 384 aa8.53□□□□□ -1.04
TRIM49-201ENST00000329758 PLEKHA4Q9H4M7 779 aa8.53□□□□□ -1.04
TRIM49-201ENST00000329758 ANKZF1Q9H8Y5 726 aa8.53□□□□□ -1.04
TRIM49-201ENST00000329758 HYPKQ9NX55 129 aa8.53□□□□□ -1.04
TRIM49-201ENST00000329758 ZNF330Q9Y3S2 320 aaPredicted RBP8.53□□□□□ -1.04
TRIM49-201ENST00000329758 KIAA0754O94854 1291 aa8.52□□□□□ -1.04
TRIM49-201ENST00000329758 A1BGP04217 495 aa8.52□□□□□ -1.04
TRIM49-201ENST00000329758 EZRP15311 586 aaKnown RBP8.52□□□□□ -1.04
TRIM49-201ENST00000329758 PECAM1P16284 738 aaPredicted RBP8.52□□□□□ -1.04
TRIM49-201ENST00000329758 RBM5P52756 815 aaKnown RBP eCLIP8.52□□□□□ -1.04
TRIM49-201ENST00000329758 CHMP4BP1P59074 171 aa8.52□□□□□ -1.04
TRIM49-201ENST00000329758 COL9A3Q14050 684 aaPredicted RBP8.52□□□□□ -1.04
TRIM49-201ENST00000329758 CDCA2Q69YH5 1023 aaPredicted RBP8.52□□□□□ -1.04
TRIM49-201ENST00000329758 B4GALNT4Q76KP1 1039 aa8.52□□□□□ -1.04
TRIM49-201ENST00000329758 MAB21L3Q8N8X9 362 aa8.52□□□□□ -1.04
TRIM49-201ENST00000329758 DRAXINQ8NBI3 349 aaPredicted RBP8.52□□□□□ -1.04
TRIM49-201ENST00000329758 TCP11Q8WWU5 503 aa8.52□□□□□ -1.04
TRIM49-201ENST00000329758 EDC3Q96F86 508 aaKnown RBP8.52□□□□□ -1.04
TRIM49-201ENST00000329758 CLIC6Q96NY7 704 aa8.52□□□□□ -1.04
TRIM49-201ENST00000329758 BPIFA3Q9BQP9 254 aa8.52□□□□□ -1.04
TRIM49-201ENST00000329758 STAP2Q9UGK3 403 aa8.52□□□□□ -1.04
TRIM49-201ENST00000329758 LTBP4Q8N2S1 1624 aa8.52□□□□□ -1.05
TRIM49-201ENST00000329758 TOGARAM1Q9Y4F4 1720 aa8.52□□□□□ -1.05
TRIM49-201ENST00000329758 COL16A1Q07092 1604 aaPredicted RBP8.52□□□□□ -1.05
TRIM49-201ENST00000329758 MRC1P22897 1456 aa8.52□□□□□ -1.05
TRIM49-201ENST00000329758 CDHR2Q9BYE9 1310 aa8.52□□□□□ -1.05
TRIM49-201ENST00000329758 VWA3AA6NCI4 1184 aa8.52□□□□□ -1.05
TRIM49-201ENST00000329758 A6NNZ2 444 aa8.52□□□□□ -1.05
TRIM49-201ENST00000329758 NEURL1BA8MQ27 555 aa8.52□□□□□ -1.05
TRIM49-201ENST00000329758 NR1I2O75469 434 aa8.52□□□□□ -1.05
TRIM49-201ENST00000329758 SASH1O94885 1247 aa8.52□□□□□ -1.05
TRIM49-201ENST00000329758 TUBB8Q3ZCM7 444 aa8.52□□□□□ -1.05
TRIM49-201ENST00000329758 FILIP1LQ4L180 1135 aa8.52□□□□□ -1.05
TRIM49-201ENST00000329758 CEP85LQ5SZL2 805 aa8.52□□□□□ -1.05
TRIM49-201ENST00000329758 TTLL7Q6ZT98 887 aa8.52□□□□□ -1.05
TRIM49-201ENST00000329758 RUFY3Q7L099 469 aa8.52□□□□□ -1.05
TRIM49-201ENST00000329758 LRP10Q7Z4F1 713 aa8.52□□□□□ -1.05
TRIM49-201ENST00000329758 YTHDF3Q7Z739 585 aaKnown RBP8.52□□□□□ -1.05
TRIM49-201ENST00000329758 AACSQ86V21 672 aa8.52□□□□□ -1.05
TRIM49-201ENST00000329758 LINS1Q8NG48 757 aa8.52□□□□□ -1.05
TRIM49-201ENST00000329758 LEO1Q8WVC0 666 aaPredicted RBP8.52□□□□□ -1.05
TRIM49-201ENST00000329758 SMARCC1Q92922 1105 aaPredicted RBP8.52□□□□□ -1.05
TRIM49-201ENST00000329758 KIFC2Q96AC6 838 aa8.52□□□□□ -1.05
TRIM49-201ENST00000329758 PAGR1Q9BTK6 254 aa8.52□□□□□ -1.05
TRIM49-201ENST00000329758 SUDS3Q9H7L9 328 aaPredicted RBP8.52□□□□□ -1.05
TRIM49-201ENST00000329758 CD248Q9HCU0 757 aa8.52□□□□□ -1.05
TRIM49-201ENST00000329758 MYO6Q9UM54 1294 aa8.52□□□□□ -1.05
TRIM49-201ENST00000329758 AOX1Q06278 1338 aa8.51□□□□□ -1.05
TRIM49-201ENST00000329758 SETSIPP0DME0 302 aa8.51□□□□□ -1.05
TRIM49-201ENST00000329758 SMTNP53814 917 aa8.51□□□□□ -1.05
TRIM49-201ENST00000329758 TLDC1Q6P9B6 456 aa8.51□□□□□ -1.05
TRIM49-201ENST00000329758 MICALCLQ6ZW33 695 aa8.51□□□□□ -1.05
TRIM49-201ENST00000329758 UBE3BQ7Z3V4 1068 aa8.51□□□□□ -1.05
TRIM49-201ENST00000329758 SYTL4Q96C24 671 aaPredicted RBP8.51□□□□□ -1.05
TRIM49-201ENST00000329758 EAF2Q96CJ1 260 aaPredicted RBP8.51□□□□□ -1.05
TRIM49-201ENST00000329758 ABCB6Q9NP58 842 aa8.51□□□□□ -1.05
TRIM49-201ENST00000329758 CHMP3Q9Y3E7 222 aa8.51□□□□□ -1.05
TRIM49-201ENST00000329758 NBPF26B4DH59 902 aa8.51□□□□□ -1.05
TRIM49-201ENST00000329758 ARHGAP6O43182 974 aa8.51□□□□□ -1.05
TRIM49-201ENST00000329758 PPFIA2O75334 1257 aa8.51□□□□□ -1.05
TRIM49-201ENST00000329758 MAGEA8P43361 318 aa8.51□□□□□ -1.05
TRIM49-201ENST00000329758 NBPF14Q5TI25 921 aa8.51□□□□□ -1.05
TRIM49-201ENST00000329758 ANKRD13DQ6ZTN6 518 aa8.51□□□□□ -1.05
TRIM49-201ENST00000329758 BRAPQ7Z569 592 aa8.51□□□□□ -1.05
TRIM49-201ENST00000329758 NBPF15Q8N660 670 aa8.51□□□□□ -1.05
TRIM49-201ENST00000329758 AOPEPQ8N6M6 819 aa8.51□□□□□ -1.05
TRIM49-201ENST00000329758 DCAF5Q96JK2 942 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms