RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 ZYXQ15942 572 aaKnown RBP18.37■□□□□ 0.53
SYNM-201ENST00000328642 SKILP12757 684 aa18.37■□□□□ 0.53
SYNM-201ENST00000328642 NCAPD2Q15021 1401 aa18.36■□□□□ 0.53
SYNM-201ENST00000328642 FSD2A1L4K1 749 aa18.36■□□□□ 0.53
SYNM-201ENST00000328642 NR5A1Q13285 461 aa18.36■□□□□ 0.53
SYNM-201ENST00000328642 APOA5Q6Q788 366 aa18.36■□□□□ 0.53
SYNM-201ENST00000328642 ECM2O94769 699 aaPredicted RBP18.36■□□□□ 0.53
SYNM-201ENST00000328642 TNNI2P48788 182 aa18.36■□□□□ 0.53
SYNM-201ENST00000328642 EIF5P55010 431 aaKnown RBP18.36■□□□□ 0.53
SYNM-201ENST00000328642 LRMPQ12912 555 aa18.36■□□□□ 0.53
SYNM-201ENST00000328642 RABL6Q3YEC7 729 aaPredicted RBP18.36■□□□□ 0.53
SYNM-201ENST00000328642 TBC1D10CQ8IV04 446 aa18.36■□□□□ 0.53
SYNM-201ENST00000328642 TRMT44Q8IYL2 757 aaKnown RBP18.36■□□□□ 0.53
SYNM-201ENST00000328642 BAZ2BQ9UIF8 2168 aaKnown RBP18.36■□□□□ 0.53
SYNM-201ENST00000328642 KIAA0825Q8IV33 1275 aa18.36■□□□□ 0.53
SYNM-201ENST00000328642 DYNLL2Q96FJ2 89 aa18.36■□□□□ 0.53
SYNM-201ENST00000328642 PCDHA7Q9UN72 937 aa18.36■□□□□ 0.53
SYNM-201ENST00000328642 LETM2Q2VYF4 491 aa18.35■□□□□ 0.53
SYNM-201ENST00000328642 GPKOWQ92917 476 aaPredicted RBP eCLIP18.35■□□□□ 0.53
SYNM-201ENST00000328642 LLPHQ9BRT6 129 aaKnown RBP18.35■□□□□ 0.53
SYNM-201ENST00000328642 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.35■□□□□ 0.53
SYNM-201ENST00000328642 WTIPA6NIX2 430 aaPredicted RBP18.35■□□□□ 0.53
SYNM-201ENST00000328642 SEPT12Q8IYM1 358 aa18.35■□□□□ 0.53
SYNM-201ENST00000328642 CPVLQ9H3G5 476 aa18.35■□□□□ 0.53
SYNM-201ENST00000328642 KIF20BQ96Q89 1820 aa18.35■□□□□ 0.53
SYNM-201ENST00000328642 KDM4FA0A1W2PPD8 638 aa18.35■□□□□ 0.53
SYNM-201ENST00000328642 PARP3Q9Y6F1 533 aa18.35■□□□□ 0.53
SYNM-201ENST00000328642 ZNF804BA4D1E1 1349 aa18.35■□□□□ 0.53
SYNM-201ENST00000328642 KDM6AO15550 1401 aaPredicted RBP18.34■□□□□ 0.53
SYNM-201ENST00000328642 USP17L8P0C7I0 530 aa18.34■□□□□ 0.53
SYNM-201ENST00000328642 CYP2D6P10635 497 aa18.34■□□□□ 0.53
SYNM-201ENST00000328642 JAKMIP3Q5VZ66 844 aa18.34■□□□□ 0.53
SYNM-201ENST00000328642 FBXO18Q8NFZ0 1043 aa18.34■□□□□ 0.53
SYNM-201ENST00000328642 ZNF274Q96GC6 653 aaPredicted RBP18.34■□□□□ 0.53
SYNM-201ENST00000328642 GPR108Q9NPR9 543 aa18.34■□□□□ 0.53
SYNM-201ENST00000328642 URI1O94763 535 aaPredicted RBP18.34■□□□□ 0.53
SYNM-201ENST00000328642 CDC25AP30304 524 aa18.34■□□□□ 0.53
SYNM-201ENST00000328642 RRAGBQ5VZM2 374 aa18.34■□□□□ 0.53
SYNM-201ENST00000328642 RASGRP4Q8TDF6 673 aa18.34■□□□□ 0.53
SYNM-201ENST00000328642 CLSTN2Q9H4D0 955 aa18.34■□□□□ 0.53
SYNM-201ENST00000328642 DACH1Q9UI36 760 aa18.34■□□□□ 0.53
SYNM-201ENST00000328642 NDUFA8P51970 172 aa18.34■□□□□ 0.53
SYNM-201ENST00000328642 PNOCQ13519 176 aa18.34■□□□□ 0.53
SYNM-201ENST00000328642 STIM1Q13586 685 aa18.34■□□□□ 0.53
SYNM-201ENST00000328642 UVSSAQ2YD98 709 aa18.34■□□□□ 0.53
SYNM-201ENST00000328642 CCDC178Q5BJE1 867 aa18.34■□□□□ 0.53
SYNM-201ENST00000328642 UBE3CQ15386 1083 aa18.33■□□□□ 0.53
SYNM-201ENST00000328642 KCNH3Q9ULD8 1083 aa18.33■□□□□ 0.53
SYNM-201ENST00000328642 FAM170AA1A519 330 aa18.33■□□□□ 0.53
SYNM-201ENST00000328642 CYB5R4Q7L1T6 521 aa18.33■□□□□ 0.53
SYNM-201ENST00000328642 BRAPQ7Z569 592 aa18.33■□□□□ 0.53
SYNM-201ENST00000328642 KRI1Q8N9T8 703 aaKnown RBP18.33■□□□□ 0.53
SYNM-201ENST00000328642 FANCBQ8NB91 859 aa18.33■□□□□ 0.53
SYNM-201ENST00000328642 RIPOR2Q9Y4F9 1068 aa18.33■□□□□ 0.53
SYNM-201ENST00000328642 KRT2P35908 639 aa18.33■□□□□ 0.52
SYNM-201ENST00000328642 STRBPQ96SI9 672 aaKnown RBP18.33■□□□□ 0.52
SYNM-201ENST00000328642 NMT2O60551 498 aa18.32■□□□□ 0.52
SYNM-201ENST00000328642 FEZ1Q99689 392 aa18.32■□□□□ 0.52
SYNM-201ENST00000328642 NRBP1Q9UHY1 535 aa18.32■□□□□ 0.52
SYNM-201ENST00000328642 ZNF609O15014 1411 aa18.32■□□□□ 0.52
SYNM-201ENST00000328642 ADGRB2O60241 1585 aa18.32■□□□□ 0.52
SYNM-201ENST00000328642 GSTO1P78417 241 aa18.32■□□□□ 0.52
SYNM-201ENST00000328642 HLA-DOAP06340 250 aa18.32■□□□□ 0.52
SYNM-201ENST00000328642 SLF2Q8IX21 1173 aa18.32■□□□□ 0.52
SYNM-201ENST00000328642 TCP11L1Q9NUJ3 509 aa18.32■□□□□ 0.52
SYNM-201ENST00000328642 SOS2Q07890 1332 aaPredicted RBP18.32■□□□□ 0.52
SYNM-201ENST00000328642 DPP8Q6V1X1 898 aaPredicted RBP18.32■□□□□ 0.52
SYNM-201ENST00000328642 SENP2Q9HC62 589 aa18.32■□□□□ 0.52
SYNM-201ENST00000328642 ERVV-1B6SEH8 477 aa18.31■□□□□ 0.52
SYNM-201ENST00000328642 CBFA2T2O43439 604 aa18.31■□□□□ 0.52
SYNM-201ENST00000328642 ARHGEF1Q92888 912 aaKnown RBP18.31■□□□□ 0.52
SYNM-201ENST00000328642 DEXIO95424 95 aa18.31■□□□□ 0.52
SYNM-201ENST00000328642 STAT6P42226 847 aa18.31■□□□□ 0.52
SYNM-201ENST00000328642 SKIDA1Q1XH10 827 aa18.31■□□□□ 0.52
SYNM-201ENST00000328642 BLZF1Q9H2G9 400 aa18.31■□□□□ 0.52
SYNM-201ENST00000328642 N4BP3O15049 544 aa18.31■□□□□ 0.52
SYNM-201ENST00000328642 EPB41L2O43491 1005 aaKnown RBP18.31■□□□□ 0.52
SYNM-201ENST00000328642 MINPP1Q9UNW1 487 aa18.31■□□□□ 0.52
SYNM-201ENST00000328642 TTF2Q9UNY4 1162 aaKnown RBP18.31■□□□□ 0.52
SYNM-201ENST00000328642 SERPINB2P05120 415 aa18.3■□□□□ 0.52
SYNM-201ENST00000328642 PTF1AQ7RTS3 328 aa18.3■□□□□ 0.52
SYNM-201ENST00000328642 GRAMD1CQ8IYS0 662 aa18.3■□□□□ 0.52
SYNM-201ENST00000328642 SLC44A5Q8NCS7 719 aa18.3■□□□□ 0.52
SYNM-201ENST00000328642 SALL3Q9BXA9 1300 aa18.3■□□□□ 0.52
SYNM-201ENST00000328642 PFKFB1P16118 471 aa18.3■□□□□ 0.52
SYNM-201ENST00000328642 RBM17Q96I25 401 aaKnown RBP18.3■□□□□ 0.52
SYNM-201ENST00000328642 DEF6Q9H4E7 631 aa18.3■□□□□ 0.52
SYNM-201ENST00000328642 CARMIL3Q8ND23 1372 aa18.3■□□□□ 0.52
SYNM-201ENST00000328642 FER1L4A9Z1Z3 1794 aa18.3■□□□□ 0.52
SYNM-201ENST00000328642 RAD51AP2Q09MP3 1159 aa18.3■□□□□ 0.52
SYNM-201ENST00000328642 LRRC47Q8N1G4 583 aaKnown RBP18.3■□□□□ 0.52
SYNM-201ENST00000328642 NUP88Q99567 741 aaPredicted RBP18.3■□□□□ 0.52
SYNM-201ENST00000328642 MST1RQ04912 1400 aa18.3■□□□□ 0.52
SYNM-201ENST00000328642 A0A0U1RQG5 324 aaPredicted RBP18.29■□□□□ 0.52
SYNM-201ENST00000328642 UBE2Q2LH0YL09 131 aa18.29■□□□□ 0.52
SYNM-201ENST00000328642 NOM1Q5C9Z4 860 aaKnown RBP18.29■□□□□ 0.52
SYNM-201ENST00000328642 NEDD4P46934 1319 aa18.29■□□□□ 0.52
SYNM-201ENST00000328642 CCT6AP40227 531 aaKnown RBP18.29■□□□□ 0.52
SYNM-201ENST00000328642 DBNDD1Q9H9R9 158 aa18.29■□□□□ 0.52
SYNM-201ENST00000328642 RNF216Q9NWF9 866 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms