RNA–Protein interactions for RNA: ENST00000328090.9

FAM208B-201, Transcript of family with sequence similarity 208 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM208B, Length 8,626 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM208B-201ENST00000328090 RAP1GDS1P52306 607 aa18.35■□□□□ 0.53
FAM208B-201ENST00000328090 MX2P20592 715 aa18.34■□□□□ 0.53
FAM208B-201ENST00000328090 MAN1A1P33908 653 aa18.34■□□□□ 0.53
FAM208B-201ENST00000328090 MCMDC2Q4G0Z9 681 aa18.34■□□□□ 0.53
FAM208B-201ENST00000328090 MRPL46Q9H2W6 279 aaKnown RBP18.34■□□□□ 0.53
FAM208B-201ENST00000328090 JDP2Q8WYK2 163 aa18.34■□□□□ 0.53
FAM208B-201ENST00000328090 PICK1Q9NRD5 415 aa18.34■□□□□ 0.53
FAM208B-201ENST00000328090 NONOQ15233 471 aaKnown RBP eCLIP18.34■□□□□ 0.532e-7■■■■□ 21
FAM208B-201ENST00000328090 NAPGQ99747 312 aaPredicted RBP18.34■□□□□ 0.53
FAM208B-201ENST00000328090 TTC21BQ7Z4L5 1316 aa18.34■□□□□ 0.53
FAM208B-201ENST00000328090 OATP04181 439 aa18.34■□□□□ 0.53
FAM208B-201ENST00000328090 MAGEB6P1A0A0J9YX57 407 aa18.33■□□□□ 0.53
FAM208B-201ENST00000328090 CADPSQ9ULU8 1353 aa18.33■□□□□ 0.53
FAM208B-201ENST00000328090 RNF40O75150 1001 aa18.33■□□□□ 0.53
FAM208B-201ENST00000328090 PICALMQ13492 652 aa18.33■□□□□ 0.53
FAM208B-201ENST00000328090 ASIC2Q16515 512 aa18.33■□□□□ 0.53
FAM208B-201ENST00000328090 HELBQ8NG08 1087 aaPredicted RBP18.33■□□□□ 0.53
FAM208B-201ENST00000328090 HNRNPCL2B2RXH8 293 aa18.33■□□□□ 0.52
FAM208B-201ENST00000328090 TRAF5O00463 557 aa18.33■□□□□ 0.52
FAM208B-201ENST00000328090 HNRNPCL1O60812 293 aaKnown RBP18.33■□□□□ 0.52
FAM208B-201ENST00000328090 JADE1Q6IE81 842 aa18.33■□□□□ 0.52
FAM208B-201ENST00000328090 TBC1D9Q6ZT07 1266 aa18.33■□□□□ 0.52
FAM208B-201ENST00000328090 CCDC68Q9H2F9 335 aa18.33■□□□□ 0.52
FAM208B-201ENST00000328090 TTF2Q9UNY4 1162 aaKnown RBP18.33■□□□□ 0.52
FAM208B-201ENST00000328090 RAD50Q92878 1312 aa18.33■□□□□ 0.52
FAM208B-201ENST00000328090 EHBP1L1Q8N3D4 1523 aa18.33■□□□□ 0.52
FAM208B-201ENST00000328090 HS1BP3Q53T59 392 aa18.33■□□□□ 0.52
FAM208B-201ENST00000328090 RTEL1Q9NZ71 1219 aa18.33■□□□□ 0.52
FAM208B-201ENST00000328090 AMOTL2Q9Y2J4 779 aa18.33■□□□□ 0.52
FAM208B-201ENST00000328090 TTC4O95801 387 aa18.33■□□□□ 0.52
FAM208B-201ENST00000328090 FAF1Q9UNN5 650 aaPredicted RBP18.33■□□□□ 0.52
FAM208B-201ENST00000328090 PPP2R5EQ16537 467 aa18.32■□□□□ 0.52
FAM208B-201ENST00000328090 CABS1Q96KC9 395 aa18.32■□□□□ 0.52
FAM208B-201ENST00000328090 CCDC186Q7Z3E2 898 aa18.32■□□□□ 0.52
FAM208B-201ENST00000328090 SPDL1Q96EA4 605 aa18.32■□□□□ 0.52
FAM208B-201ENST00000328090 NOC4LQ9BVI4 516 aaKnown RBP18.32■□□□□ 0.52
FAM208B-201ENST00000328090 VEZTQ9HBM0 779 aa18.32■□□□□ 0.52
FAM208B-201ENST00000328090 C9orf84Q5VXU9 1444 aa18.32■□□□□ 0.52
FAM208B-201ENST00000328090 SPDYE16A6NNV3 312 aaPredicted RBP18.32■□□□□ 0.52
FAM208B-201ENST00000328090 SPDYE2Q495Y8 402 aa18.32■□□□□ 0.52
FAM208B-201ENST00000328090 FLOT1O75955 427 aa18.32■□□□□ 0.52
FAM208B-201ENST00000328090 SND1Q7KZF4 910 aaKnown RBP eCLIP18.32■□□□□ 0.52
FAM208B-201ENST00000328090 KRT12Q99456 494 aa18.32■□□□□ 0.52
FAM208B-201ENST00000328090 BEGAINQ9BUH8 593 aa18.32■□□□□ 0.52
FAM208B-201ENST00000328090 NR1I2O75469 434 aa18.31■□□□□ 0.52
FAM208B-201ENST00000328090 NRBF2Q96F24 287 aa18.31■□□□□ 0.52
FAM208B-201ENST00000328090 FANCD2Q9BXW9 1451 aa18.31■□□□□ 0.52
FAM208B-201ENST00000328090 NAIPQ13075 1403 aa18.31■□□□□ 0.52
FAM208B-201ENST00000328090 DNM2P50570 870 aa18.31■□□□□ 0.52
FAM208B-201ENST00000328090 TYRO3Q06418 890 aa18.31■□□□□ 0.52
FAM208B-201ENST00000328090 SLFN5Q08AF3 891 aa18.31■□□□□ 0.52
FAM208B-201ENST00000328090 RSAD2Q8WXG1 361 aa18.31■□□□□ 0.52
FAM208B-201ENST00000328090 KARSQ15046 597 aaKnown RBP18.31■□□□□ 0.52
FAM208B-201ENST00000328090 SLC9C1Q4G0N8 1177 aa18.31■□□□□ 0.52
FAM208B-201ENST00000328090 MRRFQ96E11 262 aaKnown RBP18.31■□□□□ 0.52
FAM208B-201ENST00000328090 PDE6AP16499 860 aa18.31■□□□□ 0.52
FAM208B-201ENST00000328090 APOEP02649 317 aa18.31■□□□□ 0.52
FAM208B-201ENST00000328090 LRRC43Q8N309 656 aa18.31■□□□□ 0.52
FAM208B-201ENST00000328090 NLRP3Q96P20 1036 aa18.31■□□□□ 0.52
FAM208B-201ENST00000328090 ELP1O95163 1332 aa18.31■□□□□ 0.52
FAM208B-201ENST00000328090 PAK2Q13177 524 aa18.31■□□□□ 0.52
FAM208B-201ENST00000328090 SPOUT1Q5T280 376 aaKnown RBP18.31■□□□□ 0.52
FAM208B-201ENST00000328090 NXNQ6DKJ4 435 aa18.31■□□□□ 0.52
FAM208B-201ENST00000328090 ZNF449Q6P9G9 518 aa18.31■□□□□ 0.52
FAM208B-201ENST00000328090 CCDC169A6NNP5 214 aa18.31■□□□□ 0.52
FAM208B-201ENST00000328090 TEKT2Q9UIF3 430 aa18.31■□□□□ 0.52
FAM208B-201ENST00000328090 PNMA8AQ86V59 439 aaPredicted RBP18.3■□□□□ 0.52
FAM208B-201ENST00000328090 HOOK2Q96ED9 719 aa18.3■□□□□ 0.52
FAM208B-201ENST00000328090 LRGUKQ96M69 825 aa18.3■□□□□ 0.52
FAM208B-201ENST00000328090 LRRC9Q6ZRR7 1453 aa18.3■□□□□ 0.52
FAM208B-201ENST00000328090 KIAA1107Q9UPP5 1409 aa18.3■□□□□ 0.52
FAM208B-201ENST00000328090 CFAP221Q4G0U5 840 aa18.3■□□□□ 0.52
FAM208B-201ENST00000328090 TBC1D2Q9BYX2 928 aa18.3■□□□□ 0.52
FAM208B-201ENST00000328090 MMEL1Q495T6 779 aa18.3■□□□□ 0.52
FAM208B-201ENST00000328090 ARHGAP42A6NI28 874 aa18.3■□□□□ 0.52
FAM208B-201ENST00000328090 HIP1RO75146 1068 aa18.3■□□□□ 0.52
FAM208B-201ENST00000328090 PRPF38AQ8NAV1 312 aaKnown RBP18.3■□□□□ 0.52
FAM208B-201ENST00000328090 NUDT16Q96DE0 195 aaKnown RBP18.3■□□□□ 0.52
FAM208B-201ENST00000328090 LMNB1P20700 586 aa18.3■□□□□ 0.52
FAM208B-201ENST00000328090 PDZD4Q76G19 769 aaPredicted RBP18.3■□□□□ 0.52
FAM208B-201ENST00000328090 ARHGEF10LQ9HCE6 1279 aa18.3■□□□□ 0.52
FAM208B-201ENST00000328090 AK9Q5TCS8 1911 aa18.3■□□□□ 0.52
FAM208B-201ENST00000328090 PARP1P09874 1014 aaKnown RBP18.3■□□□□ 0.52
FAM208B-201ENST00000328090 SCHIP1Q9P0W5 487 aaPredicted RBP18.3■□□□□ 0.52
FAM208B-201ENST00000328090 DDX21Q9NR30 783 aaKnown RBP eCLIP18.29■□□□□ 0.52
FAM208B-201ENST00000328090 Q6ZUG5 572 aa18.29■□□□□ 0.52
FAM208B-201ENST00000328090 TRIML1Q8N9V2 468 aa18.29■□□□□ 0.52
FAM208B-201ENST00000328090 IVNS1ABPQ9Y6Y0 642 aa18.29■□□□□ 0.52
FAM208B-201ENST00000328090 HARSP12081 509 aaKnown RBP18.29■□□□□ 0.52
FAM208B-201ENST00000328090 TPCN1Q9ULQ1 816 aa18.29■□□□□ 0.52
FAM208B-201ENST00000328090 DNAJC25Q9H1X3 360 aa18.29■□□□□ 0.52
FAM208B-201ENST00000328090 S100BP04271 92 aaPredicted RBP18.29■□□□□ 0.52
FAM208B-201ENST00000328090 SSH1Q8WYL5 1049 aa18.29■□□□□ 0.52
FAM208B-201ENST00000328090 LARP6Q9BRS8 491 aaKnown RBP18.29■□□□□ 0.52
FAM208B-201ENST00000328090 SPATS2Q86XZ4 545 aaKnown RBP18.29■□□□□ 0.52
FAM208B-201ENST00000328090 CERS3Q8IU89 383 aa18.29■□□□□ 0.52
FAM208B-201ENST00000328090 NUCKS1Q9H1E3 243 aaKnown RBP18.29■□□□□ 0.52
FAM208B-201ENST00000328090 NCOA2Q15596 1464 aa18.29■□□□□ 0.52
FAM208B-201ENST00000328090 ZC3H15Q8WU90 426 aaKnown RBP18.28■□□□□ 0.52
FAM208B-201ENST00000328090 NLRP7Q8WX94 980 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms