RNA–Protein interactions for RNA: ENST00000326298.8

CCNC-201, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 2,212 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-201ENST00000326298 ADGRA1Q86SQ6 560 aa10.05□□□□□ -0.8
CCNC-201ENST00000326298 DZIP1Q86YF9 867 aaKnown RBP10.05□□□□□ -0.8
CCNC-201ENST00000326298 SSH3Q8TE77 659 aa10.05□□□□□ -0.8
CCNC-201ENST00000326298 MROH7-TTC4A0A0A0MT08 1334 aa10.04□□□□□ -0.8
CCNC-201ENST00000326298 ARID4AP29374 1257 aaPredicted RBP10.04□□□□□ -0.8
CCNC-201ENST00000326298 ATP8B2P98198 1209 aa10.04□□□□□ -0.8
CCNC-201ENST00000326298 SHROOM1Q2M3G4 852 aaPredicted RBP10.04□□□□□ -0.8
CCNC-201ENST00000326298 FAM163AQ96GL9 167 aaPredicted RBP10.04□□□□□ -0.8
CCNC-201ENST00000326298 EFCC1Q9HA90 598 aa10.04□□□□□ -0.8
CCNC-201ENST00000326298 CPA4Q9UI42 421 aa10.04□□□□□ -0.8
CCNC-201ENST00000326298 PTCH2Q9Y6C5 1203 aa10.04□□□□□ -0.8
CCNC-201ENST00000326298 LAMA3Q16787 3333 aa10.04□□□□□ -0.8
CCNC-201ENST00000326298 GPR75-ASB3A0A0A6YYF3 556 aa10.03□□□□□ -0.8
CCNC-201ENST00000326298 ZBTB22O15209 634 aa10.03□□□□□ -0.8
CCNC-201ENST00000326298 TLR2O60603 784 aa10.03□□□□□ -0.8
CCNC-201ENST00000326298 CYP2C8P10632 490 aa10.03□□□□□ -0.8
CCNC-201ENST00000326298 CETPP11597 493 aa10.03□□□□□ -0.8
CCNC-201ENST00000326298 PPATQ06203 517 aa10.03□□□□□ -0.8
CCNC-201ENST00000326298 SNAPC2Q13487 334 aa10.03□□□□□ -0.8
CCNC-201ENST00000326298 MVPQ14764 893 aaKnown RBP10.03□□□□□ -0.8
CCNC-201ENST00000326298 DCAF15Q66K64 600 aa10.03□□□□□ -0.8
CCNC-201ENST00000326298 OTUD7BQ6GQQ9 843 aa10.03□□□□□ -0.8
CCNC-201ENST00000326298 GPAT2Q6NUI2 795 aa10.03□□□□□ -0.8
CCNC-201ENST00000326298 ITPRIPQ8IWB1 547 aa10.03□□□□□ -0.8
CCNC-201ENST00000326298 KCNH4Q9UQ05 1017 aa10.03□□□□□ -0.8
CCNC-201ENST00000326298 AKAP2Q9Y2D5 859 aa10.03□□□□□ -0.8
CCNC-201ENST00000326298 PDS5AQ29RF7 1337 aaKnown RBP10.03□□□□□ -0.8
CCNC-201ENST00000326298 CYP2E1P05181 493 aaPredicted RBP10.03□□□□□ -0.8
CCNC-201ENST00000326298 G3BP1Q13283 466 aaKnown RBP eCLIP10.03□□□□□ -0.8
CCNC-201ENST00000326298 TNNI3KQ59H18 835 aa10.03□□□□□ -0.8
CCNC-201ENST00000326298 ERO1AQ96HE7 468 aa10.03□□□□□ -0.8
CCNC-201ENST00000326298 ZFYVE28Q9HCC9 887 aa10.03□□□□□ -0.8
CCNC-201ENST00000326298 DBNLQ9UJU6 430 aaKnown RBP10.03□□□□□ -0.8
CCNC-201ENST00000326298 HDAC5Q9UQL6 1122 aa10.03□□□□□ -0.8
CCNC-201ENST00000326298 ZHX2Q9Y6X8 837 aa10.03□□□□□ -0.8
CCNC-201ENST00000326298 FPGT-TNNI3KV9GXZ4 949 aa10.03□□□□□ -0.8
CCNC-201ENST00000326298 ADGRA2Q96PE1 1338 aa10.02□□□□□ -0.8
CCNC-201ENST00000326298 DOCK2Q92608 1830 aa10.02□□□□□ -0.8
CCNC-201ENST00000326298 PDHXO00330 501 aa10.02□□□□□ -0.81
CCNC-201ENST00000326298 ENTPD3O75355 529 aa10.02□□□□□ -0.81
CCNC-201ENST00000326298 SURF6O75683 361 aaKnown RBP10.02□□□□□ -0.81
CCNC-201ENST00000326298 EN2P19622 333 aaPredicted RBP10.02□□□□□ -0.81
CCNC-201ENST00000326298 JAG1P78504 1218 aa10.02□□□□□ -0.81
CCNC-201ENST00000326298 MAP3K10Q02779 954 aa10.02□□□□□ -0.81
CCNC-201ENST00000326298 C17orf99Q6UX52 265 aa10.02□□□□□ -0.81
CCNC-201ENST00000326298 ERICH6Q7L0X2 663 aa10.02□□□□□ -0.81
CCNC-201ENST00000326298 ZSCAN29Q8IWY8 852 aaPredicted RBP10.02□□□□□ -0.81
CCNC-201ENST00000326298 EAF2Q96CJ1 260 aaPredicted RBP10.02□□□□□ -0.81
CCNC-201ENST00000326298 CCDC8Q9H0W5 538 aaPredicted RBP10.02□□□□□ -0.81
CCNC-201ENST00000326298 PTPRAP18433 802 aa10.02□□□□□ -0.81
CCNC-201ENST00000326298 LACTBP83111 547 aaPredicted RBP10.02□□□□□ -0.81
CCNC-201ENST00000326298 NOL9Q5SY16 702 aaKnown RBP10.02□□□□□ -0.81
CCNC-201ENST00000326298 GORABQ5T7V8 394 aa10.02□□□□□ -0.81
CCNC-201ENST00000326298 SH3RF3Q8TEJ3 882 aaPredicted RBP10.02□□□□□ -0.81
CCNC-201ENST00000326298 SH3TC2Q8TF17 1288 aa10.02□□□□□ -0.81
CCNC-201ENST00000326298 PIH1D3Q9NQM4 214 aaKnown RBP10.02□□□□□ -0.81
CCNC-201ENST00000326298 RAI14Q9P0K7 980 aa10.02□□□□□ -0.81
CCNC-201ENST00000326298 PHIPQ8WWQ0 1821 aa10.01□□□□□ -0.81
CCNC-201ENST00000326298 ZAP70P43403 619 aa10.01□□□□□ -0.81
CCNC-201ENST00000326298 CEP85Q6P2H3 762 aa10.01□□□□□ -0.81
CCNC-201ENST00000326298 ZGPATQ8N5A5 531 aaKnown RBP10.01□□□□□ -0.81
CCNC-201ENST00000326298 TRIM47Q96LD4 638 aa10.01□□□□□ -0.81
CCNC-201ENST00000326298 EXOC6BQ9Y2D4 811 aa10.01□□□□□ -0.81
CCNC-201ENST00000326298 AFG3L2Q9Y4W6 797 aa10.01□□□□□ -0.81
CCNC-201ENST00000326298 SIPA1L1O43166 1804 aa10.01□□□□□ -0.81
CCNC-201ENST00000326298 ZBED9Q6R2W3 1325 aa10.01□□□□□ -0.81
CCNC-201ENST00000326298 SLC4A8Q2Y0W8 1093 aa10.01□□□□□ -0.81
CCNC-201ENST00000326298 FTSJ3Q8IY81 847 aaKnown RBP10.01□□□□□ -0.81
CCNC-201ENST00000326298 SCYL3Q8IZE3 742 aa10.01□□□□□ -0.81
CCNC-201ENST00000326298 ARMC5Q96C12 935 aa10.01□□□□□ -0.81
CCNC-201ENST00000326298 ANTXR1Q9H6X2 564 aa10.01□□□□□ -0.81
CCNC-201ENST00000326298 AATFQ9NY61 560 aaKnown RBP eCLIP10.01□□□□□ -0.81
CCNC-201ENST00000326298 PTPRFP10586 1907 aa10□□□□□ -0.81
CCNC-201ENST00000326298 TRIM75PA6NK02 468 aa10□□□□□ -0.81
CCNC-201ENST00000326298 DYNLL1P63167 89 aaKnown RBP10□□□□□ -0.81
CCNC-201ENST00000326298 SPTY2D1Q68D10 685 aaPredicted RBP10□□□□□ -0.81
CCNC-201ENST00000326298 ANKRD23Q86SG2 305 aa10□□□□□ -0.81
CCNC-201ENST00000326298 SIRT2Q8IXJ6 389 aa10□□□□□ -0.81
CCNC-201ENST00000326298 HOOK2Q96ED9 719 aa10□□□□□ -0.81
CCNC-201ENST00000326298 ZNF333Q96JL9 665 aa10□□□□□ -0.81
CCNC-201ENST00000326298 DNAJC18Q9H819 358 aa10□□□□□ -0.81
CCNC-201ENST00000326298 LRP2BPQ9P2M1 347 aa10□□□□□ -0.81
CCNC-201ENST00000326298 NOP58Q9Y2X3 529 aaKnown RBP10□□□□□ -0.81
CCNC-201ENST00000326298 DNAH12Q6ZR08 3092 aa10□□□□□ -0.81
CCNC-201ENST00000326298 PEX10O60683 326 aa9.99□□□□□ -0.81
CCNC-201ENST00000326298 OS9Q13438 667 aaPredicted RBP9.99□□□□□ -0.81
CCNC-201ENST00000326298 TREML2Q5T2D2 321 aa9.99□□□□□ -0.81
CCNC-201ENST00000326298 OSBPL5Q9H0X9 879 aaPredicted RBP9.99□□□□□ -0.81
CCNC-201ENST00000326298 A0A0G2JLL6 359 aaPredicted RBP9.99□□□□□ -0.81
CCNC-201ENST00000326298 EVX2Q03828 476 aa9.99□□□□□ -0.81
CCNC-201ENST00000326298 MTFR1Q15390 333 aa9.99□□□□□ -0.81
CCNC-201ENST00000326298 TTC39AQ5SRH9 613 aa9.99□□□□□ -0.81
CCNC-201ENST00000326298 PRRT2Q7Z6L0 340 aaPredicted RBP9.99□□□□□ -0.81
CCNC-201ENST00000326298 GPR108Q9NPR9 543 aa9.99□□□□□ -0.81
CCNC-201ENST00000326298 CDK5RAP2Q96SN8 1893 aa9.98□□□□□ -0.81
CCNC-201ENST00000326298 BCRP11274 1271 aa9.98□□□□□ -0.81
CCNC-201ENST00000326298 PSMC4P43686 418 aa9.98□□□□□ -0.81
CCNC-201ENST00000326298 C20orf194Q5TEA3 1177 aa9.98□□□□□ -0.81
CCNC-201ENST00000326298 MAPKAPK5Q8IW41 473 aa9.98□□□□□ -0.81
CCNC-201ENST00000326298 TEX11Q8IYF3 940 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms