RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 PARP3Q9Y6F1 533 aa12.26□□□□□ -0.45
SNRNP200-201ENST00000323853 TTC37Q6PGP7 1564 aa12.26□□□□□ -0.45
SNRNP200-201ENST00000323853 CLASP1Q7Z460 1538 aa12.26□□□□□ -0.45
SNRNP200-201ENST00000323853 RPL13P26373 211 aaKnown RBP12.26□□□□□ -0.45
SNRNP200-201ENST00000323853 OGFOD1Q8N543 542 aa12.26□□□□□ -0.45
SNRNP200-201ENST00000323853 EYA3Q99504 573 aa12.26□□□□□ -0.45
SNRNP200-201ENST00000323853 TERF1P54274 439 aa12.26□□□□□ -0.45
SNRNP200-201ENST00000323853 CCDC121Q6ZUS5 278 aa12.26□□□□□ -0.45
SNRNP200-201ENST00000323853 TTC6Q86TZ1 520 aa12.26□□□□□ -0.45
SNRNP200-201ENST00000323853 FMNL3Q8IVF7 1028 aa12.26□□□□□ -0.45
SNRNP200-201ENST00000323853 NSFL1CQ9UNZ2 370 aaKnown RBP12.26□□□□□ -0.45
SNRNP200-201ENST00000323853 E7EWF7 191 aa12.25□□□□□ -0.45
SNRNP200-201ENST00000323853 CALUO43852 315 aaPredicted RBP12.25□□□□□ -0.45
SNRNP200-201ENST00000323853 TEX11Q8IYF3 940 aa12.25□□□□□ -0.45
SNRNP200-201ENST00000323853 SPATA5Q8NB90 893 aa12.25□□□□□ -0.45
SNRNP200-201ENST00000323853 ZMYND15Q9H091 742 aa12.25□□□□□ -0.45
SNRNP200-201ENST00000323853 IQCGQ9H095 443 aaKnown RBP12.25□□□□□ -0.45
SNRNP200-201ENST00000323853 V9GY48 417 aaPredicted RBP12.25□□□□□ -0.45
SNRNP200-201ENST00000323853 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.25□□□□□ -0.453e-6■■■■■ 51.3
SNRNP200-201ENST00000323853 ZFYVE16Q7Z3T8 1539 aa12.25□□□□□ -0.45
SNRNP200-201ENST00000323853 BRD1O95696 1058 aa12.25□□□□□ -0.45
SNRNP200-201ENST00000323853 OTUD7BQ6GQQ9 843 aa12.25□□□□□ -0.45
SNRNP200-201ENST00000323853 FAM76AQ8TAV0 307 aa12.25□□□□□ -0.45
SNRNP200-201ENST00000323853 VAV2P52735 878 aa12.25□□□□□ -0.45
SNRNP200-201ENST00000323853 FAM173BQ6P4H8 233 aa12.25□□□□□ -0.45
SNRNP200-201ENST00000323853 MLKLQ8NB16 471 aa12.25□□□□□ -0.45
SNRNP200-201ENST00000323853 JAKMIP2Q96AA8 810 aa12.25□□□□□ -0.45
SNRNP200-201ENST00000323853 ZC3H12CQ9C0D7 883 aaKnown RBP12.25□□□□□ -0.45
SNRNP200-201ENST00000323853 VEZTQ9HBM0 779 aa12.25□□□□□ -0.45
SNRNP200-201ENST00000323853 GPCPD1Q9NPB8 672 aa12.25□□□□□ -0.45
SNRNP200-201ENST00000323853 FRMD4BQ9Y2L6 1034 aa12.25□□□□□ -0.45
SNRNP200-201ENST00000323853 GPATCH11Q8N954 259 aa12.25□□□□□ -0.45
SNRNP200-201ENST00000323853 LPIN2Q92539 896 aa12.25□□□□□ -0.45
SNRNP200-201ENST00000323853 TTC14Q96N46 770 aa12.25□□□□□ -0.45
SNRNP200-201ENST00000323853 ZBTB21Q9ULJ3 1066 aa12.25□□□□□ -0.45
SNRNP200-201ENST00000323853 VWA3BQ502W6 1294 aa12.25□□□□□ -0.45
SNRNP200-201ENST00000323853 SEL1L2Q5TEA6 688 aa12.25□□□□□ -0.45
SNRNP200-201ENST00000323853 DIS3L2Q8IYB7 885 aaKnown RBP12.25□□□□□ -0.45
SNRNP200-201ENST00000323853 NDUFB9Q9Y6M9 179 aa12.25□□□□□ -0.45
SNRNP200-201ENST00000323853 FERP16591 822 aa12.25□□□□□ -0.45
SNRNP200-201ENST00000323853 ATP5JP18859 108 aa12.25□□□□□ -0.45
SNRNP200-201ENST00000323853 CCDC97Q96F63 343 aaPredicted RBP12.25□□□□□ -0.45
SNRNP200-201ENST00000323853 TM6SF1Q9BZW5 370 aa12.25□□□□□ -0.45
SNRNP200-201ENST00000323853 BTG4Q9NY30 223 aa12.25□□□□□ -0.45
SNRNP200-201ENST00000323853 MYOM2P54296 1465 aa12.24□□□□□ -0.45
SNRNP200-201ENST00000323853 ATP2A1O14983 1001 aa12.24□□□□□ -0.45
SNRNP200-201ENST00000323853 MNAT1P51948 309 aa12.24□□□□□ -0.45
SNRNP200-201ENST00000323853 POSTNQ15063 836 aa12.24□□□□□ -0.45
SNRNP200-201ENST00000323853 ME3Q16798 604 aa12.24□□□□□ -0.45
SNRNP200-201ENST00000323853 PPP1R9BQ96SB3 815 aa12.24□□□□□ -0.45
SNRNP200-201ENST00000323853 JAK2O60674 1132 aa12.24□□□□□ -0.45
SNRNP200-201ENST00000323853 ASIC2Q16515 512 aa12.24□□□□□ -0.45
SNRNP200-201ENST00000323853 GTF3C6Q969F1 213 aa12.24□□□□□ -0.45
SNRNP200-201ENST00000323853 SAMD9LQ8IVG5 1584 aa12.24□□□□□ -0.45
SNRNP200-201ENST00000323853 PPP1R7Q15435 360 aa12.24□□□□□ -0.45
SNRNP200-201ENST00000323853 MYRIPQ8NFW9 859 aa12.24□□□□□ -0.45
SNRNP200-201ENST00000323853 NEURL1BA8MQ27 555 aa12.24□□□□□ -0.45
SNRNP200-201ENST00000323853 TRAF5O00463 557 aa12.24□□□□□ -0.45
SNRNP200-201ENST00000323853 ZAP70P43403 619 aa12.24□□□□□ -0.45
SNRNP200-201ENST00000323853 KRT40Q6A162 431 aa12.24□□□□□ -0.45
SNRNP200-201ENST00000323853 NUP58Q9BVL2 599 aa12.24□□□□□ -0.45
SNRNP200-201ENST00000323853 MTRF1LQ9UGC7 380 aaKnown RBP12.24□□□□□ -0.45
SNRNP200-201ENST00000323853 ZNF532Q9HCE3 1301 aa12.24□□□□□ -0.45
SNRNP200-201ENST00000323853 MYCNP04198 464 aaPredicted RBP12.24□□□□□ -0.45
SNRNP200-201ENST00000323853 UBLCP1Q8WVY7 318 aaPredicted RBP12.24□□□□□ -0.45
SNRNP200-201ENST00000323853 GRIPAP1Q4V328 841 aa12.23□□□□□ -0.45
SNRNP200-201ENST00000323853 MICALL1Q8N3F8 863 aa12.23□□□□□ -0.45
SNRNP200-201ENST00000323853 MYL10Q9BUA6 226 aa12.23□□□□□ -0.45
SNRNP200-201ENST00000323853 SH3TC1Q8TE82 1336 aa12.23□□□□□ -0.45
SNRNP200-201ENST00000323853 GNPATO15228 680 aa12.23□□□□□ -0.45
SNRNP200-201ENST00000323853 TBC1D8BQ0IIM8 1120 aa12.23□□□□□ -0.45
SNRNP200-201ENST00000323853 PHKBQ93100 1093 aa12.23□□□□□ -0.45
SNRNP200-201ENST00000323853 PLEKHF1Q96S99 279 aa12.23□□□□□ -0.45
SNRNP200-201ENST00000323853 STK24Q9Y6E0 443 aa12.23□□□□□ -0.45
SNRNP200-201ENST00000323853 IBTKQ9P2D0 1353 aaPredicted RBP12.23□□□□□ -0.45
SNRNP200-201ENST00000323853 UFL1O94874 794 aa12.23□□□□□ -0.45
SNRNP200-201ENST00000323853 TRAPPC3LQ5T215 181 aa12.23□□□□□ -0.45
SNRNP200-201ENST00000323853 C17orf53Q8N3J3 647 aaPredicted RBP12.23□□□□□ -0.45
SNRNP200-201ENST00000323853 LRRC45Q96CN5 670 aa12.23□□□□□ -0.45
SNRNP200-201ENST00000323853 MLH3Q9UHC1 1453 aa12.23□□□□□ -0.45
SNRNP200-201ENST00000323853 COMMD10Q9Y6G5 202 aa12.23□□□□□ -0.45
SNRNP200-201ENST00000323853 SMIM23A6NLE4 172 aa12.23□□□□□ -0.45
SNRNP200-201ENST00000323853 CDCA7Q9BWT1 371 aaPredicted RBP12.23□□□□□ -0.45
SNRNP200-201ENST00000323853 TAF5LO75529 589 aa12.23□□□□□ -0.45
SNRNP200-201ENST00000323853 PPP2R5BQ15173 497 aa12.23□□□□□ -0.45
SNRNP200-201ENST00000323853 CCDC26Q8TAB7 109 aa12.23□□□□□ -0.45
SNRNP200-201ENST00000323853 AATFQ9NY61 560 aaKnown RBP eCLIP12.23□□□□□ -0.45
SNRNP200-201ENST00000323853 MRPL12P52815 198 aaKnown RBP12.22□□□□□ -0.45
SNRNP200-201ENST00000323853 MTUS1Q9ULD2 1270 aa12.22□□□□□ -0.45
SNRNP200-201ENST00000323853 RGS12O14924 1447 aa12.22□□□□□ -0.45
SNRNP200-201ENST00000323853 ERVK-7P63135 1459 aa12.22□□□□□ -0.45
SNRNP200-201ENST00000323853 CFAP58Q5T655 872 aa12.22□□□□□ -0.45
SNRNP200-201ENST00000323853 CSGALNACT2Q8N6G5 542 aa12.22□□□□□ -0.45
SNRNP200-201ENST00000323853 FAM212AQ96EL1 285 aa12.22□□□□□ -0.45
SNRNP200-201ENST00000323853 CCDC114Q96M63 670 aa12.22□□□□□ -0.45
SNRNP200-201ENST00000323853 TMEM63CQ9P1W3 806 aa12.22□□□□□ -0.45
SNRNP200-201ENST00000323853 A1BGP04217 495 aa12.22□□□□□ -0.45
SNRNP200-201ENST00000323853 NELFBQ8WX92 580 aa12.22□□□□□ -0.45
SNRNP200-201ENST00000323853 PODXL2Q9NZ53 605 aa12.22□□□□□ -0.45
SNRNP200-201ENST00000323853 MXRA7P84157 204 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms