RNA–Protein interactions for RNA: ENST00000322712.4

PDZD3-201, Transcript of PDZ domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PDZD3, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-201ENST00000322712 ST5P78524 1137 aa23.44■■□□□ 1.34
PDZD3-201ENST00000322712 CAMK4Q16566 473 aa23.44■■□□□ 1.34
PDZD3-201ENST00000322712 MYH15Q9Y2K3 1946 aa23.43■■□□□ 1.34
PDZD3-201ENST00000322712 PRDM1O75626 825 aa23.43■■□□□ 1.34
PDZD3-201ENST00000322712 POLR3DP05423 398 aaPredicted RBP23.43■■□□□ 1.34
PDZD3-201ENST00000322712 GRIK5Q16478 980 aa23.43■■□□□ 1.34
PDZD3-201ENST00000322712 FBXO18Q8NFZ0 1043 aa23.43■■□□□ 1.34
PDZD3-201ENST00000322712 SLC12A7Q9Y666 1083 aa23.43■■□□□ 1.34
PDZD3-201ENST00000322712 POLRMTO00411 1230 aaKnown RBP23.43■■□□□ 1.34
PDZD3-201ENST00000322712 LIFRP42702 1097 aa23.43■■□□□ 1.34
PDZD3-201ENST00000322712 EZH2Q15910 746 aaKnown RBP23.43■■□□□ 1.34
PDZD3-201ENST00000322712 CFAP45Q9UL16 551 aa23.43■■□□□ 1.34
PDZD3-201ENST00000322712 XDHP47989 1333 aa23.42■■□□□ 1.34
PDZD3-201ENST00000322712 CCDC69A6NI79 296 aa23.42■■□□□ 1.34
PDZD3-201ENST00000322712 GOLGA8AA7E2F4 631 aa23.42■■□□□ 1.34
PDZD3-201ENST00000322712 RANBP6O60518 1105 aaKnown RBP23.42■■□□□ 1.34
PDZD3-201ENST00000322712 NTRK3Q16288 839 aa23.42■■□□□ 1.34
PDZD3-201ENST00000322712 DACT1Q9NYF0 836 aa23.42■■□□□ 1.34
PDZD3-201ENST00000322712 PDS5AQ29RF7 1337 aaKnown RBP23.42■■□□□ 1.34
PDZD3-201ENST00000322712 SLC4A8Q2Y0W8 1093 aa23.41■■□□□ 1.34
PDZD3-201ENST00000322712 CTR9Q6PD62 1173 aa23.41■■□□□ 1.34
PDZD3-201ENST00000322712 LEMD3Q9Y2U8 911 aa23.41■■□□□ 1.34
PDZD3-201ENST00000322712 RGPD3A6NKT7 1758 aaPredicted RBP23.41■■□□□ 1.34
PDZD3-201ENST00000322712 RGPD4Q7Z3J3 1758 aa23.41■■□□□ 1.34
PDZD3-201ENST00000322712 KIF28PB7ZC32 967 aa23.41■■□□□ 1.34
PDZD3-201ENST00000322712 USP17L12C9JPN9 530 aa23.41■■□□□ 1.34
PDZD3-201ENST00000322712 USP17L21D6R901 530 aa23.41■■□□□ 1.34
PDZD3-201ENST00000322712 NR1I2O75469 434 aa23.4■■□□□ 1.34
PDZD3-201ENST00000322712 CLCN1P35523 988 aa23.4■■□□□ 1.34
PDZD3-201ENST00000322712 WTAPQ15007 396 aa23.4■■□□□ 1.34
PDZD3-201ENST00000322712 CMTR1Q8N1G2 835 aaKnown RBP23.4■■□□□ 1.34
PDZD3-201ENST00000322712 BICD2Q8TD16 824 aa23.4■■□□□ 1.34
PDZD3-201ENST00000322712 BRIP1Q9BX63 1249 aa23.4■■□□□ 1.34
PDZD3-201ENST00000322712 RNF41Q9H4P4 317 aaPredicted RBP23.4■■□□□ 1.34
PDZD3-201ENST00000322712 ANAPC4Q9UJX5 808 aa23.4■■□□□ 1.34
PDZD3-201ENST00000322712 MYH2Q9UKX2 1941 aa23.4■■□□□ 1.34
PDZD3-201ENST00000322712 UFL1O94874 794 aa23.39■■□□□ 1.34
PDZD3-201ENST00000322712 CYP2D6P10635 497 aa23.39■■□□□ 1.34
PDZD3-201ENST00000322712 CCDC173Q0VFZ6 552 aa23.39■■□□□ 1.34
PDZD3-201ENST00000322712 DZIP1Q86YF9 867 aaKnown RBP23.39■■□□□ 1.34
PDZD3-201ENST00000322712 TDRD7Q8NHU6 1098 aaKnown RBP23.39■■□□□ 1.34
PDZD3-201ENST00000322712 ANP32BQ92688 251 aaKnown RBP23.39■■□□□ 1.34
PDZD3-201ENST00000322712 PPP1R9BQ96SB3 815 aa23.39■■□□□ 1.34
PDZD3-201ENST00000322712 ALG1Q9BT22 464 aa23.39■■□□□ 1.34
PDZD3-201ENST00000322712 DIXDC1Q155Q3 683 aa23.39■■□□□ 1.33
PDZD3-201ENST00000322712 CCDC82Q8N4S0 544 aa23.39■■□□□ 1.33
PDZD3-201ENST00000322712 FUCA2Q9BTY2 467 aa23.39■■□□□ 1.33
PDZD3-201ENST00000322712 DCP1AQ9NPI6 582 aaPredicted RBP23.39■■□□□ 1.33
PDZD3-201ENST00000322712 RCOR1Q9UKL0 485 aa23.39■■□□□ 1.33
PDZD3-201ENST00000322712 RBM17Q96I25 401 aaKnown RBP23.38■■□□□ 1.33
PDZD3-201ENST00000322712 LETM1O95202 739 aaPredicted RBP23.37■■□□□ 1.33
PDZD3-201ENST00000322712 SART3Q15020 963 aaKnown RBP23.37■■□□□ 1.33
PDZD3-201ENST00000322712 FLAD1Q8NFF5 587 aa23.37■■□□□ 1.33
PDZD3-201ENST00000322712 CAMKK2Q96RR4 588 aa23.37■■□□□ 1.33
PDZD3-201ENST00000322712 UBAC1Q9BSL1 405 aa23.37■■□□□ 1.33
PDZD3-201ENST00000322712 TNKSO95271 1327 aa23.37■■□□□ 1.33
PDZD3-201ENST00000322712 IARSP41252 1262 aaKnown RBP23.37■■□□□ 1.33
PDZD3-201ENST00000322712 CKAP2LQ8IYA6 745 aa23.37■■□□□ 1.33
PDZD3-201ENST00000322712 NUP133Q8WUM0 1156 aa23.37■■□□□ 1.33
PDZD3-201ENST00000322712 ESR2Q92731 530 aa23.37■■□□□ 1.33
PDZD3-201ENST00000322712 SLC26A6Q9BXS9 759 aa23.37■■□□□ 1.33
PDZD3-201ENST00000322712 NUP62CLQ9H1M0 184 aa23.37■■□□□ 1.33
PDZD3-201ENST00000322712 CLIC4Q9Y696 253 aa23.37■■□□□ 1.33
PDZD3-201ENST00000322712 CCDC88AQ3V6T2 1871 aa23.36■■□□□ 1.33
PDZD3-201ENST00000322712 ERICH2A1L162 156 aa23.36■■□□□ 1.33
PDZD3-201ENST00000322712 CDKL5O76039 1030 aa23.36■■□□□ 1.33
PDZD3-201ENST00000322712 GUCY1A2P33402 732 aa23.36■■□□□ 1.33
PDZD3-201ENST00000322712 ZNF396Q96N95 335 aaPredicted RBP23.36■■□□□ 1.33
PDZD3-201ENST00000322712 CRNKL1Q9BZJ0 848 aaKnown RBP23.36■■□□□ 1.33
PDZD3-201ENST00000322712 POLLQ9UGP5 575 aa23.36■■□□□ 1.33
PDZD3-201ENST00000322712 LDHBP07195 334 aaKnown RBP23.36■■□□□ 1.33
PDZD3-201ENST00000322712 KIF23Q02241 960 aaPredicted RBP23.36■■□□□ 1.33
PDZD3-201ENST00000322712 SEC23AQ15436 765 aa23.36■■□□□ 1.33
PDZD3-201ENST00000322712 SYNE3Q6ZMZ3 975 aa23.36■■□□□ 1.33
PDZD3-201ENST00000322712 ZNF804AQ7Z570 1209 aa23.36■■□□□ 1.33
PDZD3-201ENST00000322712 NLGN1Q8N2Q7 840 aa23.36■■□□□ 1.33
PDZD3-201ENST00000322712 ECM29Q5VYK3 1845 aa23.35■■□□□ 1.33
PDZD3-201ENST00000322712 SF3B2Q13435 895 aaKnown RBP23.35■■□□□ 1.33
PDZD3-201ENST00000322712 KRT40Q6A162 431 aa23.35■■□□□ 1.33
PDZD3-201ENST00000322712 ENAHQ8N8S7 591 aaPredicted RBP23.35■■□□□ 1.33
PDZD3-201ENST00000322712 GOLPH3LQ9H4A5 285 aa23.35■■□□□ 1.33
PDZD3-201ENST00000322712 MSL1Q68DK7 614 aa23.35■■□□□ 1.33
PDZD3-201ENST00000322712 CPLX2Q6PUV4 134 aaKnown RBP23.35■■□□□ 1.33
PDZD3-201ENST00000322712 ZNF654Q8IZM8 581 aa23.35■■□□□ 1.33
PDZD3-201ENST00000322712 GGA1Q9UJY5 639 aa23.35■■□□□ 1.33
PDZD3-201ENST00000322712 DUOX1Q9NRD9 1551 aa23.34■■□□□ 1.33
PDZD3-201ENST00000322712 OLFM4Q6UX06 510 aa23.34■■□□□ 1.33
PDZD3-201ENST00000322712 WDR66Q8TBY9 1149 aa23.34■■□□□ 1.33
PDZD3-201ENST00000322712 TRIM44Q96DX7 344 aaPredicted RBP23.34■■□□□ 1.33
PDZD3-201ENST00000322712 CD209Q9NNX6 404 aa23.34■■□□□ 1.33
PDZD3-201ENST00000322712 NMT2O60551 498 aa23.33■■□□□ 1.33
PDZD3-201ENST00000322712 USP17L8P0C7I0 530 aa23.33■■□□□ 1.33
PDZD3-201ENST00000322712 HOXA10P31260 410 aaPredicted RBP23.33■■□□□ 1.33
PDZD3-201ENST00000322712 ME1P48163 572 aa23.33■■□□□ 1.33
PDZD3-201ENST00000322712 RTN1Q16799 776 aa23.33■■□□□ 1.33
PDZD3-201ENST00000322712 SPTY2D1Q68D10 685 aaPredicted RBP23.33■■□□□ 1.33
PDZD3-201ENST00000322712 DEFB132Q7Z7B7 95 aa23.33■■□□□ 1.33
PDZD3-201ENST00000322712 TNMDQ9H2S6 317 aa23.33■■□□□ 1.33
PDZD3-201ENST00000322712 FAM47AQ5JRC9 791 aa23.33■■□□□ 1.33
PDZD3-201ENST00000322712 MYSM1Q5VVJ2 828 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms