RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 DEF6Q9H4E7 631 aa12.59□□□□□ -0.39
TOP3A-201ENST00000321105 TCP11L1Q9NUJ3 509 aa12.59□□□□□ -0.39
TOP3A-201ENST00000321105 PXDNQ92626 1479 aa12.59□□□□□ -0.39
TOP3A-201ENST00000321105 PRDX5P30044 214 aa12.59□□□□□ -0.39
TOP3A-201ENST00000321105 SIGLEC1Q9BZZ2 1709 aa12.59□□□□□ -0.39
TOP3A-201ENST00000321105 CDC25AP30304 524 aa12.59□□□□□ -0.39
TOP3A-201ENST00000321105 NR5A1Q13285 461 aa12.59□□□□□ -0.39
TOP3A-201ENST00000321105 JAKMIP3Q5VZ66 844 aa12.59□□□□□ -0.39
TOP3A-201ENST00000321105 GPKOWQ92917 476 aaPredicted RBP eCLIP12.59□□□□□ -0.39
TOP3A-201ENST00000321105 APOA5Q6Q788 366 aa12.58□□□□□ -0.39
TOP3A-201ENST00000321105 MARCH10Q8NA82 808 aaPredicted RBP12.58□□□□□ -0.39
TOP3A-201ENST00000321105 CAGE1Q8TC20 777 aa12.58□□□□□ -0.39
TOP3A-201ENST00000321105 KCNH3Q9ULD8 1083 aa12.58□□□□□ -0.39
TOP3A-201ENST00000321105 N4BP3O15049 544 aa12.58□□□□□ -0.4
TOP3A-201ENST00000321105 CBFA2T2O43439 604 aa12.58□□□□□ -0.4
TOP3A-201ENST00000321105 CIAO1O76071 339 aa12.58□□□□□ -0.4
TOP3A-201ENST00000321105 HLA-DOAP06340 250 aa12.58□□□□□ -0.4
TOP3A-201ENST00000321105 KRI1Q8N9T8 703 aaKnown RBP12.58□□□□□ -0.4
TOP3A-201ENST00000321105 NUP88Q99567 741 aaPredicted RBP12.58□□□□□ -0.4
TOP3A-201ENST00000321105 ISCA1Q9BUE6 129 aa12.58□□□□□ -0.4
TOP3A-201ENST00000321105 RNF216Q9NWF9 866 aaPredicted RBP12.58□□□□□ -0.4
TOP3A-201ENST00000321105 PCDHA7Q9UN72 937 aa12.58□□□□□ -0.4
TOP3A-201ENST00000321105 PARP3Q9Y6F1 533 aa12.58□□□□□ -0.4
TOP3A-201ENST00000321105 ARHGAP29Q52LW3 1261 aa12.58□□□□□ -0.4
TOP3A-201ENST00000321105 TTC14Q96N46 770 aa12.58□□□□□ -0.4
TOP3A-201ENST00000321105 LLPHQ9BRT6 129 aaKnown RBP12.58□□□□□ -0.4
TOP3A-201ENST00000321105 CPVLQ9H3G5 476 aa12.58□□□□□ -0.4
TOP3A-201ENST00000321105 BMP2KQ9NSY1 1161 aaPredicted RBP12.58□□□□□ -0.4
TOP3A-201ENST00000321105 NDUFA8P51970 172 aa12.57□□□□□ -0.4
TOP3A-201ENST00000321105 CHMP4BP1P59074 171 aa12.57□□□□□ -0.4
TOP3A-201ENST00000321105 PNOCQ13519 176 aa12.57□□□□□ -0.4
TOP3A-201ENST00000321105 UVSSAQ2YD98 709 aa12.57□□□□□ -0.4
TOP3A-201ENST00000321105 TBC1D9BQ66K14 1250 aa12.57□□□□□ -0.4
TOP3A-201ENST00000321105 BRAPQ7Z569 592 aa12.57□□□□□ -0.4
TOP3A-201ENST00000321105 SLF2Q8IX21 1173 aa12.57□□□□□ -0.4
TOP3A-201ENST00000321105 FBXO18Q8NFZ0 1043 aa12.57□□□□□ -0.4
TOP3A-201ENST00000321105 RASGRP4Q8TDF6 673 aa12.57□□□□□ -0.4
TOP3A-201ENST00000321105 DYNLL2Q96FJ2 89 aa12.57□□□□□ -0.4
TOP3A-201ENST00000321105 PRDM10Q9NQV6 1147 aa12.57□□□□□ -0.4
TOP3A-201ENST00000321105 MYOM1P52179 1685 aa12.57□□□□□ -0.4
TOP3A-201ENST00000321105 EPB41L2O43491 1005 aaKnown RBP12.57□□□□□ -0.4
TOP3A-201ENST00000321105 KRT2P35908 639 aa12.57□□□□□ -0.4
TOP3A-201ENST00000321105 STAT6P42226 847 aa12.57□□□□□ -0.4
TOP3A-201ENST00000321105 FANCBQ8NB91 859 aa12.57□□□□□ -0.4
TOP3A-201ENST00000321105 CLSTN2Q9H4D0 955 aa12.57□□□□□ -0.4
TOP3A-201ENST00000321105 ZNF804BA4D1E1 1349 aa12.57□□□□□ -0.4
TOP3A-201ENST00000321105 FSD2A1L4K1 749 aa12.57□□□□□ -0.4
TOP3A-201ENST00000321105 USP17L8P0C7I0 530 aa12.57□□□□□ -0.4
TOP3A-201ENST00000321105 GSTO1P78417 241 aa12.57□□□□□ -0.4
TOP3A-201ENST00000321105 COL9A3Q14050 684 aaPredicted RBP12.57□□□□□ -0.4
TOP3A-201ENST00000321105 WDR78Q5VTH9 848 aa12.57□□□□□ -0.4
TOP3A-201ENST00000321105 TBC1D10CQ8IV04 446 aa12.57□□□□□ -0.4
TOP3A-201ENST00000321105 RAD51AP2Q09MP3 1159 aa12.57□□□□□ -0.4
TOP3A-201ENST00000321105 DPP8Q6V1X1 898 aaPredicted RBP12.57□□□□□ -0.4
TOP3A-201ENST00000321105 ZNF274Q96GC6 653 aaPredicted RBP12.57□□□□□ -0.4
TOP3A-201ENST00000321105 SEPT12Q8IYM1 358 aa12.56□□□□□ -0.4
TOP3A-201ENST00000321105 BLZF1Q9H2G9 400 aa12.56□□□□□ -0.4
TOP3A-201ENST00000321105 NRBP1Q9UHY1 535 aa12.56□□□□□ -0.4
TOP3A-201ENST00000321105 SPDYE4A6NLX3 237 aa12.56□□□□□ -0.4
TOP3A-201ENST00000321105 CYP2D6P10635 497 aa12.56□□□□□ -0.4
TOP3A-201ENST00000321105 CCT6AP40227 531 aaKnown RBP12.56□□□□□ -0.4
TOP3A-201ENST00000321105 UBE3CQ15386 1083 aa12.56□□□□□ -0.4
TOP3A-201ENST00000321105 ZNF771Q7L3S4 317 aaPredicted RBP12.56□□□□□ -0.4
TOP3A-201ENST00000321105 ZNHIT6Q9NWK9 470 aaKnown RBP12.56□□□□□ -0.4
TOP3A-201ENST00000321105 TTF2Q9UNY4 1162 aaKnown RBP12.56□□□□□ -0.4
TOP3A-201ENST00000321105 MEGF6O75095 1541 aa12.56□□□□□ -0.4
TOP3A-201ENST00000321105 NMT2O60551 498 aa12.56□□□□□ -0.4
TOP3A-201ENST00000321105 DEXIO95424 95 aa12.56□□□□□ -0.4
TOP3A-201ENST00000321105 ITPK1Q13572 414 aa12.56□□□□□ -0.4
TOP3A-201ENST00000321105 CEP89Q96ST8 783 aa12.56□□□□□ -0.4
TOP3A-201ENST00000321105 RFX5P48382 616 aaPredicted RBP12.55□□□□□ -0.4
TOP3A-201ENST00000321105 TRIM47Q96LD4 638 aa12.55□□□□□ -0.4
TOP3A-201ENST00000321105 GPR108Q9NPR9 543 aa12.55□□□□□ -0.4
TOP3A-201ENST00000321105 SEPT11Q9NVA2 429 aaKnown RBP12.55□□□□□ -0.4
TOP3A-201ENST00000321105 PKD2L1Q9P0L9 805 aa12.55□□□□□ -0.4
TOP3A-201ENST00000321105 MTIF2P46199 727 aaKnown RBP12.55□□□□□ -0.4
TOP3A-201ENST00000321105 CBX1P83916 185 aa12.55□□□□□ -0.4
TOP3A-201ENST00000321105 RABL6Q3YEC7 729 aaPredicted RBP12.55□□□□□ -0.4
TOP3A-201ENST00000321105 LRRC47Q8N1G4 583 aaKnown RBP12.55□□□□□ -0.4
TOP3A-201ENST00000321105 STRBPQ96SI9 672 aaKnown RBP12.55□□□□□ -0.4
TOP3A-201ENST00000321105 MMRN2Q9H8L6 949 aa12.55□□□□□ -0.4
TOP3A-201ENST00000321105 RICTORQ6R327 1708 aa12.55□□□□□ -0.4
TOP3A-201ENST00000321105 PFKFB1P16118 471 aa12.55□□□□□ -0.4
TOP3A-201ENST00000321105 ASIC1P78348 528 aa12.55□□□□□ -0.4
TOP3A-201ENST00000321105 TCERG1LQ5VWI1 586 aa12.55□□□□□ -0.4
TOP3A-201ENST00000321105 GRAMD1CQ8IYS0 662 aa12.55□□□□□ -0.4
TOP3A-201ENST00000321105 BAZ2BQ9UIF8 2168 aaKnown RBP12.55□□□□□ -0.4
TOP3A-201ENST00000321105 WTIPA6NIX2 430 aaPredicted RBP12.54□□□□□ -0.4
TOP3A-201ENST00000321105 FCHSD1Q86WN1 690 aa12.54□□□□□ -0.4
TOP3A-201ENST00000321105 OGFOD1Q8N543 542 aa12.54□□□□□ -0.4
TOP3A-201ENST00000321105 SLC44A5Q8NCS7 719 aa12.54□□□□□ -0.4
TOP3A-201ENST00000321105 FRMPD2Q68DX3 1309 aaPredicted RBP12.54□□□□□ -0.4
TOP3A-201ENST00000321105 CACNB3P54284 484 aa12.54□□□□□ -0.4
TOP3A-201ENST00000321105 CYB5R4Q7L1T6 521 aa12.54□□□□□ -0.4
TOP3A-201ENST00000321105 FNBP4Q8N3X1 1017 aaPredicted RBP12.54□□□□□ -0.4
TOP3A-201ENST00000321105 KIF18AQ8NI77 898 aa12.54□□□□□ -0.4
TOP3A-201ENST00000321105 RBM17Q96I25 401 aaKnown RBP12.54□□□□□ -0.4
TOP3A-201ENST00000321105 DBNDD1Q9H9R9 158 aa12.54□□□□□ -0.4
TOP3A-201ENST00000321105 SERPINB2P05120 415 aa12.54□□□□□ -0.4
TOP3A-201ENST00000321105 TXKP42681 527 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms