RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 MYO5AQ9Y4I1 1855 aaKnown RBP17.97■□□□□ 0.47
SHROOM1-201ENST00000319854 HNRNPH2P55795 449 aaKnown RBP17.97■□□□□ 0.47
SHROOM1-201ENST00000319854 VPS37DQ86XT2 251 aa17.97■□□□□ 0.47
SHROOM1-201ENST00000319854 IFNL3Q8IZI9 196 aa17.97■□□□□ 0.47
SHROOM1-201ENST00000319854 DHX16O60231 1041 aaKnown RBP17.97■□□□□ 0.47
SHROOM1-201ENST00000319854 CDC25BP30305 580 aa17.97■□□□□ 0.47
SHROOM1-201ENST00000319854 SYNE3Q6ZMZ3 975 aa17.97■□□□□ 0.47
SHROOM1-201ENST00000319854 CCAR2Q8N163 923 aaKnown RBP17.97■□□□□ 0.47
SHROOM1-201ENST00000319854 SLU7O95391 586 aaKnown RBP17.96■□□□□ 0.47
SHROOM1-201ENST00000319854 ATP2B1P20020 1258 aa17.96■□□□□ 0.47
SHROOM1-201ENST00000319854 UBE3CQ15386 1083 aa17.96■□□□□ 0.47
SHROOM1-201ENST00000319854 NUP133Q8WUM0 1156 aa17.96■□□□□ 0.47
SHROOM1-201ENST00000319854 ALG1Q9BT22 464 aa17.96■□□□□ 0.47
SHROOM1-201ENST00000319854 ZSWIM5Q9P217 1185 aa17.96■□□□□ 0.47
SHROOM1-201ENST00000319854 RCOR1Q9UKL0 485 aa17.96■□□□□ 0.47
SHROOM1-201ENST00000319854 FHOD1Q9Y613 1164 aa17.96■□□□□ 0.47
SHROOM1-201ENST00000319854 FGFR2P21802 821 aa17.96■□□□□ 0.47
SHROOM1-201ENST00000319854 FBXO18Q8NFZ0 1043 aa17.96■□□□□ 0.47
SHROOM1-201ENST00000319854 NOL10Q9BSC4 688 aaKnown RBP17.96■□□□□ 0.47
SHROOM1-201ENST00000319854 TCRBV5S4A2TA0A5A2 114 aa17.95■□□□□ 0.46
SHROOM1-201ENST00000319854 ARID4AP29374 1257 aaPredicted RBP17.95■□□□□ 0.46
SHROOM1-201ENST00000319854 NGLY1Q96IV0 654 aa17.95■□□□□ 0.46
SHROOM1-201ENST00000319854 CALCOCO1Q9P1Z2 691 aa17.95■□□□□ 0.46
SHROOM1-201ENST00000319854 TACC3Q9Y6A5 838 aa17.95■□□□□ 0.46
SHROOM1-201ENST00000319854 CYP7A1P22680 504 aa17.95■□□□□ 0.46
SHROOM1-201ENST00000319854 CYP2C19P33261 490 aa17.95■□□□□ 0.46
SHROOM1-201ENST00000319854 SLC26A6Q9BXS9 759 aa17.95■□□□□ 0.46
SHROOM1-201ENST00000319854 SRP68Q9UHB9 627 aaKnown RBP17.95■□□□□ 0.46
SHROOM1-201ENST00000319854 SLIT2O94813 1529 aa17.95■□□□□ 0.46
SHROOM1-201ENST00000319854 CYP2D7A0A087X1C5 515 aa17.95■□□□□ 0.46
SHROOM1-201ENST00000319854 GOLGA8AA7E2F4 631 aa17.95■□□□□ 0.46
SHROOM1-201ENST00000319854 NTSR2O95665 410 aa17.95■□□□□ 0.46
SHROOM1-201ENST00000319854 NDUFA8P51970 172 aa17.95■□□□□ 0.46
SHROOM1-201ENST00000319854 APOA5Q6Q788 366 aa17.95■□□□□ 0.46
SHROOM1-201ENST00000319854 GOLGA6L19H0YKK7 550 aa17.94■□□□□ 0.46
SHROOM1-201ENST00000319854 ZBTB43O43298 467 aa17.94■□□□□ 0.46
SHROOM1-201ENST00000319854 PRDM1O75626 825 aa17.94■□□□□ 0.46
SHROOM1-201ENST00000319854 SLC51AQ86UW1 340 aa17.94■□□□□ 0.46
SHROOM1-201ENST00000319854 H2AFXP16104 143 aaPredicted RBP17.94■□□□□ 0.46
SHROOM1-201ENST00000319854 ADGRA1Q86SQ6 560 aa17.94■□□□□ 0.46
SHROOM1-201ENST00000319854 NUP98P52948 1817 aa17.94■□□□□ 0.46
SHROOM1-201ENST00000319854 hCG_1642624A0A1W2PR95 340 aa17.93■□□□□ 0.46
SHROOM1-201ENST00000319854 PLA2G4AP47712 749 aa17.93■□□□□ 0.46
SHROOM1-201ENST00000319854 CLCN6P51797 869 aa17.93■□□□□ 0.46
SHROOM1-201ENST00000319854 SARM1Q6SZW1 724 aa17.93■□□□□ 0.46
SHROOM1-201ENST00000319854 LINC00116Q8NCU8 138 aa17.93■□□□□ 0.46
SHROOM1-201ENST00000319854 MRFAP1L1Q96HT8 127 aa17.93■□□□□ 0.46
SHROOM1-201ENST00000319854 ROBO1Q9Y6N7 1651 aa17.93■□□□□ 0.46
SHROOM1-201ENST00000319854 BECN2A8MW95 431 aa17.93■□□□□ 0.46
SHROOM1-201ENST00000319854 SH2B2O14492 632 aaPredicted RBP17.93■□□□□ 0.46
SHROOM1-201ENST00000319854 SNW1Q13573 536 aaKnown RBP17.93■□□□□ 0.46
SHROOM1-201ENST00000319854 SLC12A7Q9Y666 1083 aa17.93■□□□□ 0.46
SHROOM1-201ENST00000319854 NHSL1Q5SYE7 1610 aa17.93■□□□□ 0.46
SHROOM1-201ENST00000319854 GSG1L2A8MUP6 293 aa17.93■□□□□ 0.46
SHROOM1-201ENST00000319854 PATL2C9JE40 543 aaKnown RBP17.93■□□□□ 0.46
SHROOM1-201ENST00000319854 MYSM1Q5VVJ2 828 aa17.93■□□□□ 0.46
SHROOM1-201ENST00000319854 MFSD6Q6ZSS7 791 aa17.93■□□□□ 0.46
SHROOM1-201ENST00000319854 TFCP2L1Q9NZI6 479 aa17.93■□□□□ 0.46
SHROOM1-201ENST00000319854 KLRK1P26718 216 aa17.92■□□□□ 0.46
SHROOM1-201ENST00000319854 PAXIP1Q6ZW49 1069 aaPredicted RBP17.92■□□□□ 0.46
SHROOM1-201ENST00000319854 LRP6O75581 1613 aa17.92■□□□□ 0.46
SHROOM1-201ENST00000319854 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.92■□□□□ 0.46
SHROOM1-201ENST00000319854 NWD2Q9ULI1 1742 aa17.92■□□□□ 0.46
SHROOM1-201ENST00000319854 SPECC1Q5M775 1068 aa17.92■□□□□ 0.46
SHROOM1-201ENST00000319854 CELF1Q92879 486 aaKnown RBP17.92■□□□□ 0.46
SHROOM1-201ENST00000319854 SPTLC2O15270 562 aa17.91■□□□□ 0.46
SHROOM1-201ENST00000319854 IARSP41252 1262 aaKnown RBP17.91■□□□□ 0.46
SHROOM1-201ENST00000319854 FAM160A1Q05DH4 1040 aa17.91■□□□□ 0.46
SHROOM1-201ENST00000319854 ANKRD18AQ8IVF6 992 aa17.91■□□□□ 0.46
SHROOM1-201ENST00000319854 DHX40Q8IX18 779 aaKnown RBP17.91■□□□□ 0.46
SHROOM1-201ENST00000319854 MRPS27Q92552 414 aaKnown RBP17.91■□□□□ 0.46
SHROOM1-201ENST00000319854 KCNJ14Q9UNX9 436 aa17.91■□□□□ 0.46
SHROOM1-201ENST00000319854 AKAP11Q9UKA4 1901 aa17.91■□□□□ 0.46
SHROOM1-201ENST00000319854 GUCY1A2P33402 732 aa17.91■□□□□ 0.46
SHROOM1-201ENST00000319854 DYNLL1P63167 89 aaKnown RBP17.91■□□□□ 0.46
SHROOM1-201ENST00000319854 BMS1Q14692 1282 aaKnown RBP17.91■□□□□ 0.46
SHROOM1-201ENST00000319854 ZRSR1Q15695 479 aaKnown RBP17.91■□□□□ 0.46
SHROOM1-201ENST00000319854 PARP10Q53GL7 1025 aa17.91■□□□□ 0.46
SHROOM1-201ENST00000319854 E4F1Q66K89 784 aaPredicted RBP17.91■□□□□ 0.46
SHROOM1-201ENST00000319854 KRT40Q6A162 431 aa17.91■□□□□ 0.46
SHROOM1-201ENST00000319854 LINC00301Q8NCQ3 95 aa17.91■□□□□ 0.46
SHROOM1-201ENST00000319854 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.91■□□□□ 0.46
SHROOM1-201ENST00000319854 PNMA6AP0CW24 399 aaPredicted RBP17.91■□□□□ 0.46
SHROOM1-201ENST00000319854 SYT10Q6XYQ8 523 aa17.91■□□□□ 0.46
SHROOM1-201ENST00000319854 IGDCC4Q8TDY8 1250 aa17.91■□□□□ 0.46
SHROOM1-201ENST00000319854 TRIM34Q9BYJ4 488 aa17.91■□□□□ 0.46
SHROOM1-201ENST00000319854 LY9Q9HBG7 655 aa17.91■□□□□ 0.46
SHROOM1-201ENST00000319854 NEMFO60524 1076 aa17.9■□□□□ 0.46
SHROOM1-201ENST00000319854 KIF23Q02241 960 aaPredicted RBP17.9■□□□□ 0.46
SHROOM1-201ENST00000319854 EVX2Q03828 476 aa17.9■□□□□ 0.46
SHROOM1-201ENST00000319854 TBC1D9BQ66K14 1250 aa17.9■□□□□ 0.46
SHROOM1-201ENST00000319854 CPLX2Q6PUV4 134 aaKnown RBP17.9■□□□□ 0.46
SHROOM1-201ENST00000319854 SPATA31A5Q5VU36 1347 aa17.9■□□□□ 0.46
SHROOM1-201ENST00000319854 SPATA31A7Q8IWB4 1347 aa17.9■□□□□ 0.46
SHROOM1-201ENST00000319854 RANBP6O60518 1105 aaKnown RBP17.9■□□□□ 0.46
SHROOM1-201ENST00000319854 EVCP57679 992 aa17.9■□□□□ 0.46
SHROOM1-201ENST00000319854 NBPF11Q86T75 865 aa17.9■□□□□ 0.46
SHROOM1-201ENST00000319854 CLIC6Q96NY7 704 aa17.9■□□□□ 0.46
SHROOM1-201ENST00000319854 ZNF652Q9Y2D9 606 aa17.9■□□□□ 0.46
SHROOM1-201ENST00000319854 ZMYM6O95789 1325 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms