RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 AK9Q5TCS8 1911 aa17.66■□□□□ 0.42
RPP40-201ENST00000319533 BCRP11274 1271 aa17.66■□□□□ 0.42
RPP40-201ENST00000319533 HOXD10P28358 340 aa17.66■□□□□ 0.42
RPP40-201ENST00000319533 PSMC4P43686 418 aa17.66■□□□□ 0.42
RPP40-201ENST00000319533 RGS3P49796 1198 aa17.66■□□□□ 0.42
RPP40-201ENST00000319533 MTX1Q13505 466 aa17.66■□□□□ 0.42
RPP40-201ENST00000319533 RASGRF1Q13972 1273 aa17.66■□□□□ 0.42
RPP40-201ENST00000319533 ARHGAP45Q92619 1136 aa17.66■□□□□ 0.42
RPP40-201ENST00000319533 MEIS3Q99687 375 aa17.66■□□□□ 0.42
RPP40-201ENST00000319533 MYH2Q9UKX2 1941 aa17.66■□□□□ 0.42
RPP40-201ENST00000319533 DOCK2Q92608 1830 aa17.65■□□□□ 0.42
RPP40-201ENST00000319533 A0A0G2JLL6 359 aaPredicted RBP17.65■□□□□ 0.42
RPP40-201ENST00000319533 OSBPP22059 807 aa17.65■□□□□ 0.42
RPP40-201ENST00000319533 TIMM10P62072 90 aa17.65■□□□□ 0.42
RPP40-201ENST00000319533 PRRT2Q7Z6L0 340 aaPredicted RBP17.65■□□□□ 0.42
RPP40-201ENST00000319533 SLF2Q8IX21 1173 aa17.65■□□□□ 0.42
RPP40-201ENST00000319533 SCYL3Q8IZE3 742 aa17.65■□□□□ 0.42
RPP40-201ENST00000319533 PARK7Q99497 189 aaKnown RBP17.65■□□□□ 0.42
RPP40-201ENST00000319533 PTPRAP18433 802 aa17.64■□□□□ 0.41
RPP40-201ENST00000319533 RARSP54136 660 aaKnown RBP17.64■□□□□ 0.41
RPP40-201ENST00000319533 FASTKD5Q7L8L6 764 aaKnown RBP17.64■□□□□ 0.41
RPP40-201ENST00000319533 SLC45A1Q9Y2W3 748 aa17.64■□□□□ 0.41
RPP40-201ENST00000319533 AFG3L2Q9Y4W6 797 aa17.64■□□□□ 0.41
RPP40-201ENST00000319533 DDTLA6NHG4 134 aaPredicted RBP17.63■□□□□ 0.41
RPP40-201ENST00000319533 FMNL1O95466 1100 aaPredicted RBP17.63■□□□□ 0.41
RPP40-201ENST00000319533 GRK4P32298 578 aa17.63■□□□□ 0.41
RPP40-201ENST00000319533 MTFR1Q15390 333 aa17.63■□□□□ 0.41
RPP40-201ENST00000319533 SPTY2D1Q68D10 685 aaPredicted RBP17.63■□□□□ 0.41
RPP40-201ENST00000319533 DZIP1Q86YF9 867 aaKnown RBP17.63■□□□□ 0.41
RPP40-201ENST00000319533 SHISA4Q96DD7 197 aa17.63■□□□□ 0.41
RPP40-201ENST00000319533 XAGE2Q96GT9 111 aa17.63■□□□□ 0.41
RPP40-201ENST00000319533 DDX4Q9NQI0 724 aaKnown RBP17.63■□□□□ 0.41
RPP40-201ENST00000319533 AKAP2Q9Y2D5 859 aa17.63■□□□□ 0.41
RPP40-201ENST00000319533 ZHX2Q9Y6X8 837 aa17.63■□□□□ 0.41
RPP40-201ENST00000319533 GPR75-ASB3A0A0A6YYF3 556 aa17.62■□□□□ 0.41
RPP40-201ENST00000319533 A0A1B0GUL7 405 aa17.62■□□□□ 0.41
RPP40-201ENST00000319533 CTNND1O60716 968 aaKnown RBP17.62■□□□□ 0.41
RPP40-201ENST00000319533 MYCP01106 439 aaPredicted RBP17.62■□□□□ 0.41
RPP40-201ENST00000319533 GNAI3P08754 354 aa17.62■□□□□ 0.41
RPP40-201ENST00000319533 CYP2C8P10632 490 aa17.62■□□□□ 0.41
RPP40-201ENST00000319533 RHBDL3P58872 404 aa17.62■□□□□ 0.41
RPP40-201ENST00000319533 MVPQ14764 893 aaKnown RBP17.62■□□□□ 0.41
RPP40-201ENST00000319533 RAET1EQ8TD07 263 aa17.62■□□□□ 0.41
RPP40-201ENST00000319533 ZNF384Q8TF68 577 aa17.62■□□□□ 0.41
RPP40-201ENST00000319533 PICK1Q9NRD5 415 aa17.62■□□□□ 0.41
RPP40-201ENST00000319533 ABCF2Q9UG63 623 aa17.62■□□□□ 0.41
RPP40-201ENST00000319533 MROH7-TTC4A0A0A0MT08 1334 aa17.62■□□□□ 0.41
RPP40-201ENST00000319533 MYPNQ86TC9 1320 aa17.62■□□□□ 0.41
RPP40-201ENST00000319533 CEP290O15078 2479 aa17.62■□□□□ 0.41
RPP40-201ENST00000319533 SRGAP3O43295 1099 aa17.61■□□□□ 0.41
RPP40-201ENST00000319533 TBC1D12O60347 775 aa17.61■□□□□ 0.41
RPP40-201ENST00000319533 BTDP43251 543 aa17.61■□□□□ 0.41
RPP40-201ENST00000319533 FCGRTP55899 365 aa17.61■□□□□ 0.41
RPP40-201ENST00000319533 TFCP2Q12800 502 aa17.61■□□□□ 0.41
RPP40-201ENST00000319533 UBE2Q1Q7Z7E8 422 aa17.61■□□□□ 0.41
RPP40-201ENST00000319533 NKX2-3Q8TAU0 364 aa17.61■□□□□ 0.41
RPP40-201ENST00000319533 PHIPQ8WWQ0 1821 aa17.61■□□□□ 0.41
RPP40-201ENST00000319533 MAP4K4O95819 1239 aaPredicted RBP17.6■□□□□ 0.41
RPP40-201ENST00000319533 GJB1P08034 283 aa17.6■□□□□ 0.41
RPP40-201ENST00000319533 GJA8P48165 433 aa17.6■□□□□ 0.41
RPP40-201ENST00000319533 FXR1P51114 621 aaKnown RBP eCLIP17.6■□□□□ 0.41
RPP40-201ENST00000319533 MECOMQ03112 1051 aa17.6■□□□□ 0.41
RPP40-201ENST00000319533 ZSCAN29Q8IWY8 852 aaPredicted RBP17.6■□□□□ 0.41
RPP40-201ENST00000319533 MIER1Q8N108 512 aa17.6■□□□□ 0.41
RPP40-201ENST00000319533 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.6■□□□□ 0.41
RPP40-201ENST00000319533 DOCK1Q14185 1865 aa17.6■□□□□ 0.41
RPP40-201ENST00000319533 PTPRFP10586 1907 aa17.6■□□□□ 0.41
RPP40-201ENST00000319533 MGAMO43451 1857 aa17.59■□□□□ 0.41
RPP40-201ENST00000319533 COL2A1P02458 1487 aaPredicted RBP17.59■□□□□ 0.41
RPP40-201ENST00000319533 ECM2O94769 699 aaPredicted RBP17.59■□□□□ 0.41
RPP40-201ENST00000319533 SLURP2P0DP57 97 aa17.59■□□□□ 0.41
RPP40-201ENST00000319533 PRKCZQ05513 592 aa17.59■□□□□ 0.41
RPP40-201ENST00000319533 ERICH6Q7L0X2 663 aa17.59■□□□□ 0.41
RPP40-201ENST00000319533 HMG20BQ9P0W2 317 aa17.59■□□□□ 0.41
RPP40-201ENST00000319533 COLQQ9Y215 455 aaPredicted RBP17.59■□□□□ 0.41
RPP40-201ENST00000319533 H0YGN5 161 aa17.58■□□□□ 0.4
RPP40-201ENST00000319533 CCL5P13501 91 aa17.58■□□□□ 0.4
RPP40-201ENST00000319533 SLAIN1Q8ND83 568 aa17.58■□□□□ 0.4
RPP40-201ENST00000319533 NSUN4Q96CB9 384 aaKnown RBP17.58■□□□□ 0.4
RPP40-201ENST00000319533 ARID4AP29374 1257 aaPredicted RBP17.57■□□□□ 0.4
RPP40-201ENST00000319533 UBXN2AP68543 259 aa17.57■□□□□ 0.4
RPP40-201ENST00000319533 PICALMQ13492 652 aa17.57■□□□□ 0.4
RPP40-201ENST00000319533 GADL1Q6ZQY3 521 aa17.57■□□□□ 0.4
RPP40-201ENST00000319533 SPATA5Q8NB90 893 aa17.57■□□□□ 0.4
RPP40-201ENST00000319533 GABRQQ9UN88 632 aa17.57■□□□□ 0.4
RPP40-201ENST00000319533 LDHCP07864 332 aa17.56■□□□□ 0.4
RPP40-201ENST00000319533 CAPN2P17655 700 aa17.56■□□□□ 0.4
RPP40-201ENST00000319533 GSTO1P78417 241 aa17.56■□□□□ 0.4
RPP40-201ENST00000319533 IRF5Q13568 498 aa17.56■□□□□ 0.4
RPP40-201ENST00000319533 PXYLP1Q8TE99 480 aa17.56■□□□□ 0.4
RPP40-201ENST00000319533 RNF208Q9H0X6 261 aa17.56■□□□□ 0.4
RPP40-201ENST00000319533 OSBPL5Q9H0X9 879 aaPredicted RBP17.56■□□□□ 0.4
RPP40-201ENST00000319533 AGTPBP1Q9UPW5 1226 aa17.56■□□□□ 0.4
RPP40-201ENST00000319533 IPO8O15397 1037 aaKnown RBP17.55■□□□□ 0.4
RPP40-201ENST00000319533 GNAI2P04899 355 aa17.55■□□□□ 0.4
RPP40-201ENST00000319533 TRIM27P14373 513 aa17.55■□□□□ 0.4
RPP40-201ENST00000319533 FLT3LGP49771 235 aa17.55■□□□□ 0.4
RPP40-201ENST00000319533 NEUROD6Q96NK8 337 aa17.55■□□□□ 0.4
RPP40-201ENST00000319533 TBC1D2Q9BYX2 928 aa17.55■□□□□ 0.4
RPP40-201ENST00000319533 TRIOBPQ9H2D6 2365 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms