RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 VEGFAP15692 232 aaPredicted RBP10.9□□□□□ -0.66
CAPN3-201ENST00000318023 GTF2IP78347 998 aa10.9□□□□□ -0.66
CAPN3-201ENST00000318023 CAMK4Q16566 473 aa10.9□□□□□ -0.66
CAPN3-201ENST00000318023 GORABQ5T7V8 394 aa10.9□□□□□ -0.66
CAPN3-201ENST00000318023 SIRT2Q8IXJ6 389 aa10.9□□□□□ -0.66
CAPN3-201ENST00000318023 NEUROD6Q96NK8 337 aa10.9□□□□□ -0.66
CAPN3-201ENST00000318023 ZNF804BA4D1E1 1349 aa10.9□□□□□ -0.66
CAPN3-201ENST00000318023 XDHP47989 1333 aa10.9□□□□□ -0.66
CAPN3-201ENST00000318023 KIAA0825Q8IV33 1275 aa10.9□□□□□ -0.66
CAPN3-201ENST00000318023 ZNRF3Q9ULT6 936 aa10.9□□□□□ -0.66
CAPN3-201ENST00000318023 SUFUQ9UMX1 484 aa10.9□□□□□ -0.66
CAPN3-201ENST00000318023 GPS2Q13227 327 aa10.89□□□□□ -0.67
CAPN3-201ENST00000318023 TTC22Q5TAA0 569 aa10.89□□□□□ -0.67
CAPN3-201ENST00000318023 CC2D2BQ6DHV5 1058 aa10.89□□□□□ -0.67
CAPN3-201ENST00000318023 PSMD1Q99460 953 aa10.89□□□□□ -0.67
CAPN3-201ENST00000318023 UBE2HP62256 183 aa10.89□□□□□ -0.67
CAPN3-201ENST00000318023 CIAPIN1Q6FI81 312 aa10.89□□□□□ -0.67
CAPN3-201ENST00000318023 UPF3BQ9BZI7 483 aaKnown RBP10.89□□□□□ -0.67
CAPN3-201ENST00000318023 CLIP2Q9UDT6 1046 aa10.89□□□□□ -0.67
CAPN3-201ENST00000318023 CCDC192P0DO97 292 aa10.89□□□□□ -0.67
CAPN3-201ENST00000318023 SDSP20132 328 aa10.89□□□□□ -0.67
CAPN3-201ENST00000318023 LMOD1P29536 600 aaPredicted RBP10.89□□□□□ -0.67
CAPN3-201ENST00000318023 TIMM10P62072 90 aa10.89□□□□□ -0.67
CAPN3-201ENST00000318023 FOXR1Q6PIV2 292 aa10.89□□□□□ -0.67
CAPN3-201ENST00000318023 KIAA1551Q9HCM1 1747 aa10.88□□□□□ -0.67
CAPN3-201ENST00000318023 GNAI2P04899 355 aa10.88□□□□□ -0.67
CAPN3-201ENST00000318023 PRAMEF18Q5VWM3 479 aa10.88□□□□□ -0.67
CAPN3-201ENST00000318023 CKAP2LQ8IYA6 745 aa10.88□□□□□ -0.67
CAPN3-201ENST00000318023 FBXO18Q8NFZ0 1043 aa10.88□□□□□ -0.67
CAPN3-201ENST00000318023 DONSONQ9NYP3 566 aa10.88□□□□□ -0.67
CAPN3-201ENST00000318023 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.88□□□□□ -0.67
CAPN3-201ENST00000318023 NRXN2Q9P2S2 1712 aa10.88□□□□□ -0.67
CAPN3-201ENST00000318023 COL4A5P29400 1685 aa10.88□□□□□ -0.67
CAPN3-201ENST00000318023 POTECB2RU33 542 aa10.88□□□□□ -0.67
CAPN3-201ENST00000318023 TDO2P48775 406 aa10.88□□□□□ -0.67
CAPN3-201ENST00000318023 BCAMP50895 628 aa10.88□□□□□ -0.67
CAPN3-201ENST00000318023 TMCO3Q6UWJ1 677 aa10.88□□□□□ -0.67
CAPN3-201ENST00000318023 SUPT20HQ8NEM7 779 aa10.88□□□□□ -0.67
CAPN3-201ENST00000318023 FAM200AQ8TCP9 573 aa10.88□□□□□ -0.67
CAPN3-201ENST00000318023 EYA3Q99504 573 aa10.88□□□□□ -0.67
CAPN3-201ENST00000318023 SURF6O75683 361 aaKnown RBP10.87□□□□□ -0.67
CAPN3-201ENST00000318023 SCNN1DP51172 638 aa10.87□□□□□ -0.67
CAPN3-201ENST00000318023 C1QTNF8P60827 252 aa10.87□□□□□ -0.67
CAPN3-201ENST00000318023 MICALL2Q8IY33 904 aa10.87□□□□□ -0.67
CAPN3-201ENST00000318023 ASTN2O75129 1339 aaPredicted RBP10.87□□□□□ -0.67
CAPN3-201ENST00000318023 WDR33Q9C0J8 1336 aaKnown RBP10.87□□□□□ -0.67
CAPN3-201ENST00000318023 GNAI3P08754 354 aa10.87□□□□□ -0.67
CAPN3-201ENST00000318023 EPHX2P34913 555 aa10.87□□□□□ -0.67
CAPN3-201ENST00000318023 ZNF75DP51815 510 aa10.87□□□□□ -0.67
CAPN3-201ENST00000318023 RBM5P52756 815 aaKnown RBP eCLIP10.87□□□□□ -0.67
CAPN3-201ENST00000318023 SATB1Q01826 763 aa10.87□□□□□ -0.67
CAPN3-201ENST00000318023 TTLL5Q6EMB2 1281 aa10.87□□□□□ -0.67
CAPN3-201ENST00000318023 NYAP1Q6ZVC0 841 aa10.87□□□□□ -0.67
CAPN3-201ENST00000318023 GOLGA5Q8TBA6 731 aa10.87□□□□□ -0.67
CAPN3-201ENST00000318023 CNOT7Q9UIV1 285 aaKnown RBP10.87□□□□□ -0.67
CAPN3-201ENST00000318023 PCDHAC2Q9Y5I4 1007 aa10.87□□□□□ -0.67
CAPN3-201ENST00000318023 SASH3O75995 380 aa10.87□□□□□ -0.67
CAPN3-201ENST00000318023 PTPN12Q05209 780 aaKnown RBP10.87□□□□□ -0.67
CAPN3-201ENST00000318023 NOM1Q5C9Z4 860 aaKnown RBP10.87□□□□□ -0.67
CAPN3-201ENST00000318023 REXO1L1PQ8IX06 675 aa10.87□□□□□ -0.67
CAPN3-201ENST00000318023 LARP6Q9BRS8 491 aaKnown RBP10.87□□□□□ -0.67
CAPN3-201ENST00000318023 PLA2G12BQ9BX93 195 aa10.87□□□□□ -0.67
CAPN3-201ENST00000318023 EPC1Q9H2F5 836 aa10.87□□□□□ -0.67
CAPN3-201ENST00000318023 IL1RAPL2Q9NP60 686 aa10.87□□□□□ -0.67
CAPN3-201ENST00000318023 PALD1Q9ULE6 856 aa10.87□□□□□ -0.67
CAPN3-201ENST00000318023 COL24A1Q17RW2 1714 aa10.87□□□□□ -0.67
CAPN3-201ENST00000318023 FZD9O00144 591 aa10.86□□□□□ -0.67
CAPN3-201ENST00000318023 TRAF5O00463 557 aa10.86□□□□□ -0.67
CAPN3-201ENST00000318023 SKILP12757 684 aa10.86□□□□□ -0.67
CAPN3-201ENST00000318023 ATP2B4P23634 1241 aa10.86□□□□□ -0.67
CAPN3-201ENST00000318023 PRKG1Q13976 671 aa10.86□□□□□ -0.67
CAPN3-201ENST00000318023 CASC1Q6TDU7 716 aa10.86□□□□□ -0.67
CAPN3-201ENST00000318023 CCDC91Q7Z6B0 441 aa10.86□□□□□ -0.67
CAPN3-201ENST00000318023 TRPM4Q8TD43 1214 aa10.86□□□□□ -0.67
CAPN3-201ENST00000318023 MRVI1Q9Y6F6 885 aa10.86□□□□□ -0.67
CAPN3-201ENST00000318023 ZRANB2O95218 330 aaKnown RBP eCLIP10.86□□□□□ -0.67
CAPN3-201ENST00000318023 CASTP20810 708 aaKnown RBP10.86□□□□□ -0.67
CAPN3-201ENST00000318023 MAGEA9P43362 315 aa10.86□□□□□ -0.67
CAPN3-201ENST00000318023 CUL4AQ13619 759 aa10.86□□□□□ -0.67
CAPN3-201ENST00000318023 ANO6Q4KMQ2 910 aa10.86□□□□□ -0.67
CAPN3-201ENST00000318023 RNF217Q8TC41 542 aa10.86□□□□□ -0.67
CAPN3-201ENST00000318023 CBX8Q9HC52 389 aa10.86□□□□□ -0.67
CAPN3-201ENST00000318023 HACL1Q9UJ83 578 aa10.86□□□□□ -0.67
CAPN3-201ENST00000318023 CCDC171Q6TFL3 1326 aa10.86□□□□□ -0.67
CAPN3-201ENST00000318023 KIF13BQ9NQT8 1826 aa10.86□□□□□ -0.67
CAPN3-201ENST00000318023 EIF3CLB5ME19 914 aaKnown RBP10.85□□□□□ -0.67
CAPN3-201ENST00000318023 GOLIM4O00461 696 aa10.85□□□□□ -0.67
CAPN3-201ENST00000318023 IRF6O14896 467 aa10.85□□□□□ -0.67
CAPN3-201ENST00000318023 ZBTB7BO15156 539 aaPredicted RBP10.85□□□□□ -0.67
CAPN3-201ENST00000318023 SASH1O94885 1247 aa10.85□□□□□ -0.67
CAPN3-201ENST00000318023 ADORA1P30542 326 aa10.85□□□□□ -0.67
CAPN3-201ENST00000318023 TYRO3Q06418 890 aa10.85□□□□□ -0.67
CAPN3-201ENST00000318023 TFCP2Q12800 502 aa10.85□□□□□ -0.67
CAPN3-201ENST00000318023 FAM43BQ6ZT52 329 aaPredicted RBP10.85□□□□□ -0.67
CAPN3-201ENST00000318023 ARHGAP45Q92619 1136 aa10.85□□□□□ -0.67
CAPN3-201ENST00000318023 EIF3CQ99613 913 aaKnown RBP10.85□□□□□ -0.67
CAPN3-201ENST00000318023 TAF1DQ9H5J8 278 aaPredicted RBP10.85□□□□□ -0.67
CAPN3-201ENST00000318023 PDRG1Q9NUG6 133 aa10.85□□□□□ -0.67
CAPN3-201ENST00000318023 CEP126Q9P2H0 1117 aa10.85□□□□□ -0.67
CAPN3-201ENST00000318023 RPAP1Q9BWH6 1393 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms