RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 LIG1P18858 919 aa5.89□□□□□ -1.47
SMCO3-201ENST00000316048 C19orf57Q0VDD7 668 aa5.89□□□□□ -1.47
SMCO3-201ENST00000316048 MKL1Q969V6 931 aa5.89□□□□□ -1.47
SMCO3-201ENST00000316048 CRBNQ96SW2 442 aa5.89□□□□□ -1.47
SMCO3-201ENST00000316048 MSRB2Q9Y3D2 182 aa5.89□□□□□ -1.47
SMCO3-201ENST00000316048 ALAS2P22557 587 aa5.89□□□□□ -1.47
SMCO3-201ENST00000316048 POU4F3Q15319 338 aa5.89□□□□□ -1.47
SMCO3-201ENST00000316048 TNNI3KQ59H18 835 aa5.89□□□□□ -1.47
SMCO3-201ENST00000316048 GOLGA6L1Q8N7Z2 621 aa5.89□□□□□ -1.47
SMCO3-201ENST00000316048 DNAJC7Q99615 494 aa5.89□□□□□ -1.47
SMCO3-201ENST00000316048 SOX17Q9H6I2 414 aaPredicted RBP5.89□□□□□ -1.47
SMCO3-201ENST00000316048 EHMT1Q9H9B1 1298 aa5.89□□□□□ -1.47
SMCO3-201ENST00000316048 NSFL1CQ9UNZ2 370 aaKnown RBP5.89□□□□□ -1.47
SMCO3-201ENST00000316048 CSADQ9Y600 493 aa5.89□□□□□ -1.47
SMCO3-201ENST00000316048 FAM86C2PA6NEL3 165 aa5.88□□□□□ -1.47
SMCO3-201ENST00000316048 DCDC2CA8MYV0 355 aa5.88□□□□□ -1.47
SMCO3-201ENST00000316048 ADAM11O75078 769 aa5.88□□□□□ -1.47
SMCO3-201ENST00000316048 HTR3BO95264 441 aa5.88□□□□□ -1.47
SMCO3-201ENST00000316048 PIP4K2BP78356 416 aa5.88□□□□□ -1.47
SMCO3-201ENST00000316048 PDE3AQ14432 1141 aa5.88□□□□□ -1.47
SMCO3-201ENST00000316048 ZYXQ15942 572 aaKnown RBP5.88□□□□□ -1.47
SMCO3-201ENST00000316048 LILRB2Q8N423 598 aa5.88□□□□□ -1.47
SMCO3-201ENST00000316048 CORO1BQ9BR76 489 aa5.88□□□□□ -1.47
SMCO3-201ENST00000316048 USP26Q9BXU7 913 aa5.88□□□□□ -1.47
SMCO3-201ENST00000316048 SHISA8B8ZZ34 492 aa5.87□□□□□ -1.47
SMCO3-201ENST00000316048 GJB6O95452 261 aa5.87□□□□□ -1.47
SMCO3-201ENST00000316048 SETDB1Q15047 1291 aa5.87□□□□□ -1.47
SMCO3-201ENST00000316048 PRAMEF27A3QJZ7 478 aa5.87□□□□□ -1.47
SMCO3-201ENST00000316048 LILRB5O75023 590 aa5.87□□□□□ -1.47
SMCO3-201ENST00000316048 ATE1O95260 518 aa5.87□□□□□ -1.47
SMCO3-201ENST00000316048 ADAMTS2O95450 1211 aa5.87□□□□□ -1.47
SMCO3-201ENST00000316048 CYP11A1P05108 521 aa5.87□□□□□ -1.47
SMCO3-201ENST00000316048 VSIG8P0DPA2 414 aa5.87□□□□□ -1.47
SMCO3-201ENST00000316048 MSL1Q68DK7 614 aa5.87□□□□□ -1.47
SMCO3-201ENST00000316048 OVOS1Q6IE37 1185 aa5.87□□□□□ -1.47
SMCO3-201ENST00000316048 CHSY3Q70JA7 882 aa5.87□□□□□ -1.47
SMCO3-201ENST00000316048 WFDC8Q8IUA0 241 aa5.87□□□□□ -1.47
SMCO3-201ENST00000316048 RBBP8NLQ8NC74 664 aaPredicted RBP5.87□□□□□ -1.47
SMCO3-201ENST00000316048 DDX54Q8TDD1 881 aaKnown RBP5.87□□□□□ -1.47
SMCO3-201ENST00000316048 GPATCH3Q96I76 525 aa5.87□□□□□ -1.47
SMCO3-201ENST00000316048 KCNK4Q9NYG8 393 aa5.87□□□□□ -1.47
SMCO3-201ENST00000316048 REV1Q9UBZ9 1251 aa5.87□□□□□ -1.47
SMCO3-201ENST00000316048 GDF2Q9UK05 429 aaPredicted RBP5.87□□□□□ -1.47
SMCO3-201ENST00000316048 LOC100289279A0A1B0GTE1 492 aa5.86□□□□□ -1.47
SMCO3-201ENST00000316048 A0A1W2PQH9 124 aa5.86□□□□□ -1.47
SMCO3-201ENST00000316048 ACRP10323 421 aa5.86□□□□□ -1.47
SMCO3-201ENST00000316048 COL9A3Q14050 684 aaPredicted RBP5.86□□□□□ -1.47
SMCO3-201ENST00000316048 FOXD4L6Q3SYB3 417 aaPredicted RBP5.86□□□□□ -1.47
SMCO3-201ENST00000316048 MRM1Q6IN84 353 aaKnown RBP5.86□□□□□ -1.47
SMCO3-201ENST00000316048 C6orf15Q6UXA7 325 aaPredicted RBP5.86□□□□□ -1.47
SMCO3-201ENST00000316048 FOXD4L3Q6VB84 417 aaPredicted RBP5.86□□□□□ -1.47
SMCO3-201ENST00000316048 TTC6Q86TZ1 520 aa5.86□□□□□ -1.47
SMCO3-201ENST00000316048 C12orf40Q86WS4 652 aa5.86□□□□□ -1.47
SMCO3-201ENST00000316048 GALNT6Q8NCL4 622 aa5.86□□□□□ -1.47
SMCO3-201ENST00000316048 SH3TC2Q8TF17 1288 aa5.86□□□□□ -1.47
SMCO3-201ENST00000316048 UPK3BL1B0FP48 263 aa5.86□□□□□ -1.47
SMCO3-201ENST00000316048 UPK3BL2E5RIL1 263 aa5.86□□□□□ -1.47
SMCO3-201ENST00000316048 SRSF11Q05519 484 aaKnown RBP5.86□□□□□ -1.47
SMCO3-201ENST00000316048 DMRTC2Q8IXT2 367 aaPredicted RBP5.86□□□□□ -1.47
SMCO3-201ENST00000316048 EDARADDQ8WWZ3 215 aa5.86□□□□□ -1.47
SMCO3-201ENST00000316048 PRR36Q9H6K5 1346 aa5.85□□□□□ -1.47
SMCO3-201ENST00000316048 DEAF1O75398 565 aaPredicted RBP5.85□□□□□ -1.47
SMCO3-201ENST00000316048 IMPDH2P12268 514 aa5.85□□□□□ -1.47
SMCO3-201ENST00000316048 FAM117BQ6P1L5 589 aa5.85□□□□□ -1.47
SMCO3-201ENST00000316048 SPATC1Q76KD6 591 aa5.85□□□□□ -1.47
SMCO3-201ENST00000316048 OR6P1Q8NGX9 317 aa5.85□□□□□ -1.47
SMCO3-201ENST00000316048 TMEM40Q8WWA1 233 aa5.85□□□□□ -1.47
SMCO3-201ENST00000316048 ELMO3Q96BJ8 720 aa5.85□□□□□ -1.47
SMCO3-201ENST00000316048 WDR18Q9BV38 432 aa5.85□□□□□ -1.47
SMCO3-201ENST00000316048 KLHL3Q9UH77 587 aa5.85□□□□□ -1.47
SMCO3-201ENST00000316048 PFDN2Q9UHV9 154 aa5.85□□□□□ -1.47
SMCO3-201ENST00000316048 PCDHB10Q9UN67 800 aa5.85□□□□□ -1.47
SMCO3-201ENST00000316048 PCDHGC5Q9Y5F6 944 aa5.85□□□□□ -1.47
SMCO3-201ENST00000316048 MEIS3P2A8K0S8 358 aa5.84□□□□□ -1.47
SMCO3-201ENST00000316048 PDPK1O15530 556 aa5.84□□□□□ -1.47
SMCO3-201ENST00000316048 DDAH1O94760 285 aa5.84□□□□□ -1.47
SMCO3-201ENST00000316048 HMGB1P09429 215 aaKnown RBP5.84□□□□□ -1.47
SMCO3-201ENST00000316048 ARL4DP49703 201 aa5.84□□□□□ -1.47
SMCO3-201ENST00000316048 CASP7P55210 303 aa5.84□□□□□ -1.47
SMCO3-201ENST00000316048 UBASH3BQ8TF42 649 aa5.84□□□□□ -1.47
SMCO3-201ENST00000316048 OSGEPQ9NPF4 335 aa5.84□□□□□ -1.47
SMCO3-201ENST00000316048 KRT82Q9NSB4 513 aa5.84□□□□□ -1.47
SMCO3-201ENST00000316048 ESYT3A0FGR9 886 aa5.84□□□□□ -1.47
SMCO3-201ENST00000316048 ENPP3O14638 875 aa5.84□□□□□ -1.47
SMCO3-201ENST00000316048 DIAPH1O60610 1272 aaKnown RBP5.84□□□□□ -1.47
SMCO3-201ENST00000316048 NID1P14543 1247 aa5.84□□□□□ -1.47
SMCO3-201ENST00000316048 PLCG1P19174 1290 aa5.84□□□□□ -1.47
SMCO3-201ENST00000316048 GUCY2CP25092 1073 aa5.84□□□□□ -1.47
SMCO3-201ENST00000316048 HSD3B2P26439 372 aa5.84□□□□□ -1.47
SMCO3-201ENST00000316048 POLR2BP30876 1174 aaKnown RBP5.84□□□□□ -1.47
SMCO3-201ENST00000316048 LCE2CQ5TA81 110 aa5.84□□□□□ -1.47
SMCO3-201ENST00000316048 SCARA3Q6AZY7 606 aa5.84□□□□□ -1.47
SMCO3-201ENST00000316048 CYFIP1Q7L576 1253 aa5.84□□□□□ -1.47
SMCO3-201ENST00000316048 CACTIN-AS1Q8N1I8 211 aa5.84□□□□□ -1.47
SMCO3-201ENST00000316048 WNT8BQ93098 351 aa5.84□□□□□ -1.47
SMCO3-201ENST00000316048 CCDC113Q9H0I3 377 aa5.84□□□□□ -1.47
SMCO3-201ENST00000316048 FANCLQ9NW38 375 aa5.84□□□□□ -1.47
SMCO3-201ENST00000316048 LEMD3Q9Y2U8 911 aa5.84□□□□□ -1.47
SMCO3-201ENST00000316048 LTBP3Q9NS15 1303 aa5.84□□□□□ -1.48
SMCO3-201ENST00000316048 SLC22A31A6NKX4 558 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms