RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 ZNF112Q9UJU3 913 aa10.09□□□□□ -0.79
TPM3-203ENST00000312970 LAMA3Q16787 3333 aa10.09□□□□□ -0.79
TPM3-203ENST00000312970 IRF6O14896 467 aa10.08□□□□□ -0.8
TPM3-203ENST00000312970 BCAR3O75815 825 aa10.08□□□□□ -0.8
TPM3-203ENST00000312970 ADORA1P30542 326 aa10.08□□□□□ -0.8
TPM3-203ENST00000312970 TFCP2Q12800 502 aa10.08□□□□□ -0.8
TPM3-203ENST00000312970 PPIL2Q13356 520 aa10.08□□□□□ -0.8
TPM3-203ENST00000312970 MTX1Q13505 466 aa10.08□□□□□ -0.8
TPM3-203ENST00000312970 SPTY2D1Q68D10 685 aaPredicted RBP10.08□□□□□ -0.8
TPM3-203ENST00000312970 ATF7IPQ6VMQ6 1270 aa10.08□□□□□ -0.8
TPM3-203ENST00000312970 SLF2Q8IX21 1173 aa10.08□□□□□ -0.8
TPM3-203ENST00000312970 FRAT1Q92837 279 aaPredicted RBP10.08□□□□□ -0.8
TPM3-203ENST00000312970 FAM163AQ96GL9 167 aaPredicted RBP10.08□□□□□ -0.8
TPM3-203ENST00000312970 XAGE2Q96GT9 111 aa10.08□□□□□ -0.8
TPM3-203ENST00000312970 ZCCHC17Q9NP64 241 aaKnown RBP10.08□□□□□ -0.8
TPM3-203ENST00000312970 FAM198AQ9UFP1 575 aa10.08□□□□□ -0.8
TPM3-203ENST00000312970 ABCF2Q9UG63 623 aa10.08□□□□□ -0.8
TPM3-203ENST00000312970 RPAP1Q9BWH6 1393 aaPredicted RBP10.08□□□□□ -0.8
TPM3-203ENST00000312970 MYH13Q9UKX3 1938 aa10.07□□□□□ -0.8
TPM3-203ENST00000312970 A0A1B0GUL7 405 aa10.07□□□□□ -0.8
TPM3-203ENST00000312970 BTBD19C9JJ37 291 aa10.07□□□□□ -0.8
TPM3-203ENST00000312970 TLR2O60603 784 aa10.07□□□□□ -0.8
TPM3-203ENST00000312970 GNAI2P04899 355 aa10.07□□□□□ -0.8
TPM3-203ENST00000312970 TRIM27P14373 513 aa10.07□□□□□ -0.8
TPM3-203ENST00000312970 INPP5BP32019 993 aa10.07□□□□□ -0.8
TPM3-203ENST00000312970 NFIAQ12857 509 aa10.07□□□□□ -0.8
TPM3-203ENST00000312970 MVPQ14764 893 aaKnown RBP10.07□□□□□ -0.8
TPM3-203ENST00000312970 KIF22Q14807 665 aa10.07□□□□□ -0.8
TPM3-203ENST00000312970 DZIP1Q86YF9 867 aaKnown RBP10.07□□□□□ -0.8
TPM3-203ENST00000312970 NEUROD6Q96NK8 337 aa10.07□□□□□ -0.8
TPM3-203ENST00000312970 IDI2Q9BXS1 227 aa10.07□□□□□ -0.8
TPM3-203ENST00000312970 AK9Q5TCS8 1911 aa10.07□□□□□ -0.8
TPM3-203ENST00000312970 PDS5AQ29RF7 1337 aaKnown RBP10.07□□□□□ -0.8
TPM3-203ENST00000312970 ENTPD3O75355 529 aa10.06□□□□□ -0.8
TPM3-203ENST00000312970 CAP1Q01518 475 aa10.06□□□□□ -0.8
TPM3-203ENST00000312970 G3BP1Q13283 466 aaKnown RBP eCLIP10.06□□□□□ -0.88e-7■■□□□ 13.8
TPM3-203ENST00000312970 RASGRF1Q13972 1273 aa10.06□□□□□ -0.8
TPM3-203ENST00000312970 GORABQ5T7V8 394 aa10.06□□□□□ -0.8
TPM3-203ENST00000312970 NBPF11Q86T75 865 aa10.06□□□□□ -0.8
TPM3-203ENST00000312970 ZFPM1Q8IX07 1006 aa10.06□□□□□ -0.8
TPM3-203ENST00000312970 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.06□□□□□ -0.8
TPM3-203ENST00000312970 KCNV2Q8TDN2 545 aa10.06□□□□□ -0.8
TPM3-203ENST00000312970 CLUAP1Q96AJ1 413 aa10.06□□□□□ -0.8
TPM3-203ENST00000312970 GAKO14976 1311 aa10.06□□□□□ -0.8
TPM3-203ENST00000312970 DLL1O00548 723 aa10.05□□□□□ -0.8
TPM3-203ENST00000312970 GNRH1P01148 92 aa10.05□□□□□ -0.8
TPM3-203ENST00000312970 LDHCP07864 332 aa10.05□□□□□ -0.8
TPM3-203ENST00000312970 RGS3P49796 1198 aa10.05□□□□□ -0.8
TPM3-203ENST00000312970 NOL9Q5SY16 702 aaKnown RBP10.05□□□□□ -0.8
TPM3-203ENST00000312970 ANKRD23Q86SG2 305 aa10.05□□□□□ -0.8
TPM3-203ENST00000312970 ZSCAN29Q8IWY8 852 aaPredicted RBP10.05□□□□□ -0.8
TPM3-203ENST00000312970 ARMC5Q96C12 935 aa10.05□□□□□ -0.8
TPM3-203ENST00000312970 ZMYND15Q9H091 742 aa10.05□□□□□ -0.8
TPM3-203ENST00000312970 SLC24A3Q9HC58 644 aa10.05□□□□□ -0.8
TPM3-203ENST00000312970 KCNH4Q9UQ05 1017 aa10.05□□□□□ -0.8
TPM3-203ENST00000312970 TNNQ9UQP3 1299 aa10.05□□□□□ -0.8
TPM3-203ENST00000312970 UNC80Q8N2C7 3258 aa10.04□□□□□ -0.8
TPM3-203ENST00000312970 GPR75-ASB3A0A0A6YYF3 556 aa10.04□□□□□ -0.8
TPM3-203ENST00000312970 PNMA6EA0A0J9YXQ4 647 aa10.04□□□□□ -0.8
TPM3-203ENST00000312970 PHF20L1A8MW92 1017 aa10.04□□□□□ -0.8
TPM3-203ENST00000312970 PDHXO00330 501 aa10.04□□□□□ -0.8
TPM3-203ENST00000312970 CXCL11O14625 94 aa10.04□□□□□ -0.8
TPM3-203ENST00000312970 BTDP43251 543 aa10.04□□□□□ -0.8
TPM3-203ENST00000312970 LACTBP83111 547 aaPredicted RBP10.04□□□□□ -0.8
TPM3-203ENST00000312970 MAP3K10Q02779 954 aa10.04□□□□□ -0.8
TPM3-203ENST00000312970 MECOMQ03112 1051 aa10.04□□□□□ -0.8
TPM3-203ENST00000312970 ZKSCAN2Q63HK3 967 aa10.04□□□□□ -0.8
TPM3-203ENST00000312970 C17orf99Q6UX52 265 aa10.04□□□□□ -0.8
TPM3-203ENST00000312970 SPATA5Q8NB90 893 aa10.04□□□□□ -0.8
TPM3-203ENST00000312970 TMEM106CQ9BVX2 250 aa10.04□□□□□ -0.8
TPM3-203ENST00000312970 HMG20BQ9P0W2 317 aa10.04□□□□□ -0.8
TPM3-203ENST00000312970 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.04□□□□□ -0.8
TPM3-203ENST00000312970 ZSWIM8A7E2V4 1837 aa10.04□□□□□ -0.8
TPM3-203ENST00000312970 MYH2Q9UKX2 1941 aa10.03□□□□□ -0.8
TPM3-203ENST00000312970 H0YGN5 161 aa10.03□□□□□ -0.8
TPM3-203ENST00000312970 MAP4K4O95819 1239 aaPredicted RBP10.03□□□□□ -0.8
TPM3-203ENST00000312970 UQCRFS1P1P0C7P4 283 aa10.03□□□□□ -0.8
TPM3-203ENST00000312970 PRMT2P55345 433 aa10.03□□□□□ -0.8
TPM3-203ENST00000312970 GSTO1P78417 241 aa10.03□□□□□ -0.8
TPM3-203ENST00000312970 SLC9C1Q4G0N8 1177 aa10.03□□□□□ -0.8
TPM3-203ENST00000312970 SH3BP5LQ7L8J4 393 aa10.03□□□□□ -0.8
TPM3-203ENST00000312970 SCYL3Q8IZE3 742 aa10.03□□□□□ -0.8
TPM3-203ENST00000312970 TMEM57Q8N5G2 664 aa10.03□□□□□ -0.8
TPM3-203ENST00000312970 ARID3AQ99856 593 aa10.03□□□□□ -0.8
TPM3-203ENST00000312970 DDX4Q9NQI0 724 aaKnown RBP10.03□□□□□ -0.8
TPM3-203ENST00000312970 PICK1Q9NRD5 415 aa10.03□□□□□ -0.8
TPM3-203ENST00000312970 PTCH2Q9Y6C5 1203 aa10.03□□□□□ -0.8
TPM3-203ENST00000312970 ZHX2Q9Y6X8 837 aa10.03□□□□□ -0.8
TPM3-203ENST00000312970 MROH7-TTC4A0A0A0MT08 1334 aa10.03□□□□□ -0.8
TPM3-203ENST00000312970 DDTLA6NHG4 134 aaPredicted RBP10.02□□□□□ -0.81
TPM3-203ENST00000312970 TBC1D12O60347 775 aa10.02□□□□□ -0.81
TPM3-203ENST00000312970 CTNND1O60716 968 aaKnown RBP10.02□□□□□ -0.81
TPM3-203ENST00000312970 PTPRAP18433 802 aa10.02□□□□□ -0.81
TPM3-203ENST00000312970 HOXD10P28358 340 aa10.02□□□□□ -0.81
TPM3-203ENST00000312970 ARID4AP29374 1257 aaPredicted RBP10.02□□□□□ -0.81
TPM3-203ENST00000312970 RHBDL3P58872 404 aa10.02□□□□□ -0.81
TPM3-203ENST00000312970 ATP8B2P98198 1209 aa10.02□□□□□ -0.81
TPM3-203ENST00000312970 HNRNPUQ00839 825 aaKnown RBP eCLIP10.02□□□□□ -0.81
TPM3-203ENST00000312970 PICALMQ13492 652 aa10.02□□□□□ -0.81
TPM3-203ENST00000312970 MOGSQ13724 837 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms