RNA–Protein interactions for RNA: ENST00000312849.4

LSMEM1-201, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSMEM1, Length 1,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-201ENST00000312849 CCDC196A0A1B0GTZ2 297 aa11.13□□□□□ -0.63
LSMEM1-201ENST00000312849 IFIT3O14879 490 aaKnown RBP11.13□□□□□ -0.63
LSMEM1-201ENST00000312849 SFPQP23246 707 aaKnown RBP eCLIP11.13□□□□□ -0.63
LSMEM1-201ENST00000312849 CDC27P30260 824 aa11.13□□□□□ -0.63
LSMEM1-201ENST00000312849 NCBP1Q09161 790 aaKnown RBP11.13□□□□□ -0.63
LSMEM1-201ENST00000312849 NCAPHQ15003 741 aa11.13□□□□□ -0.63
LSMEM1-201ENST00000312849 RAB11FIP4Q86YS3 637 aa11.13□□□□□ -0.63
LSMEM1-201ENST00000312849 STAG1Q8WVM7 1258 aa11.13□□□□□ -0.63
LSMEM1-201ENST00000312849 WWC3Q9ULE0 1092 aa11.13□□□□□ -0.63
LSMEM1-201ENST00000312849 PNPLA7Q6ZV29 1317 aa11.13□□□□□ -0.63
LSMEM1-201ENST00000312849 RTL9Q8NET4 1388 aa11.13□□□□□ -0.63
LSMEM1-201ENST00000312849 MARCKSP29966 332 aaPredicted RBP11.12□□□□□ -0.63
LSMEM1-201ENST00000312849 FANCCQ00597 558 aa11.12□□□□□ -0.63
LSMEM1-201ENST00000312849 MYL5Q02045 173 aa11.12□□□□□ -0.63
LSMEM1-201ENST00000312849 ARID5BQ14865 1188 aa11.12□□□□□ -0.63
LSMEM1-201ENST00000312849 PPP2R5BQ15173 497 aa11.12□□□□□ -0.63
LSMEM1-201ENST00000312849 MFSD6Q6ZSS7 791 aa11.12□□□□□ -0.63
LSMEM1-201ENST00000312849 TMC6Q7Z403 805 aa11.12□□□□□ -0.63
LSMEM1-201ENST00000312849 MICU3Q86XE3 530 aa11.12□□□□□ -0.63
LSMEM1-201ENST00000312849 TRIM22Q8IYM9 498 aa11.12□□□□□ -0.63
LSMEM1-201ENST00000312849 KRI1Q8N9T8 703 aaKnown RBP11.12□□□□□ -0.63
LSMEM1-201ENST00000312849 ERCC4Q92889 916 aaPredicted RBP11.12□□□□□ -0.63
LSMEM1-201ENST00000312849 RNF41Q9H4P4 317 aaPredicted RBP11.12□□□□□ -0.63
LSMEM1-201ENST00000312849 FAM217BQ9NTX9 383 aaPredicted RBP11.12□□□□□ -0.63
LSMEM1-201ENST00000312849 ZBTB1Q9Y2K1 713 aa11.12□□□□□ -0.63
LSMEM1-201ENST00000312849 MROH7-TTC4A0A0A0MT08 1334 aa11.12□□□□□ -0.63
LSMEM1-201ENST00000312849 KAT6BQ8WYB5 2073 aa11.12□□□□□ -0.63
LSMEM1-201ENST00000312849 RREB1Q92766 1687 aa11.12□□□□□ -0.63
LSMEM1-201ENST00000312849 A0A087WWV3 80 aa11.12□□□□□ -0.63
LSMEM1-201ENST00000312849 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.12□□□□□ -0.63
LSMEM1-201ENST00000312849 MBD4O95243 580 aa11.12□□□□□ -0.63
LSMEM1-201ENST00000312849 PARP10Q53GL7 1025 aa11.12□□□□□ -0.63
LSMEM1-201ENST00000312849 SHC4Q6S5L8 630 aa11.12□□□□□ -0.63
LSMEM1-201ENST00000312849 MAGEB6Q8N7X4 407 aa11.12□□□□□ -0.63
LSMEM1-201ENST00000312849 FBXW7Q969H0 707 aa11.12□□□□□ -0.63
LSMEM1-201ENST00000312849 ERO1AQ96HE7 468 aa11.12□□□□□ -0.63
LSMEM1-201ENST00000312849 AIFM3Q96NN9 605 aa11.12□□□□□ -0.63
LSMEM1-201ENST00000312849 FOXP1Q9H334 677 aaPredicted RBP11.12□□□□□ -0.63
LSMEM1-201ENST00000312849 GJB4Q9NTQ9 266 aa11.12□□□□□ -0.63
LSMEM1-201ENST00000312849 ZSWIM5Q9P217 1185 aa11.12□□□□□ -0.63
LSMEM1-201ENST00000312849 MORC2Q9Y6X9 1032 aaPredicted RBP11.12□□□□□ -0.63
LSMEM1-201ENST00000312849 PHLPP1O60346 1717 aa11.12□□□□□ -0.63
LSMEM1-201ENST00000312849 UBN2Q6ZU65 1347 aa11.12□□□□□ -0.63
LSMEM1-201ENST00000312849 ERICH2A1L162 156 aa11.11□□□□□ -0.63
LSMEM1-201ENST00000312849 FAM177BA6PVY3 158 aa11.11□□□□□ -0.63
LSMEM1-201ENST00000312849 GSG1L2A8MUP6 293 aa11.11□□□□□ -0.63
LSMEM1-201ENST00000312849 EXOC5O00471 708 aa11.11□□□□□ -0.63
LSMEM1-201ENST00000312849 BIN1O00499 593 aa11.11□□□□□ -0.63
LSMEM1-201ENST00000312849 RILPL1Q5EBL4 403 aa11.11□□□□□ -0.63
LSMEM1-201ENST00000312849 KANK3Q6NY19 840 aa11.11□□□□□ -0.63
LSMEM1-201ENST00000312849 KRBA2Q6ZNG9 492 aa11.11□□□□□ -0.63
LSMEM1-201ENST00000312849 NOSTRINQ8IVI9 506 aa11.11□□□□□ -0.63
LSMEM1-201ENST00000312849 ZNF579Q8NAF0 562 aaKnown RBP11.11□□□□□ -0.63
LSMEM1-201ENST00000312849 ZNF592Q92610 1267 aa11.11□□□□□ -0.63
LSMEM1-201ENST00000312849 PHKBQ93100 1093 aa11.11□□□□□ -0.63
LSMEM1-201ENST00000312849 SLC4A9Q96Q91 983 aa11.11□□□□□ -0.63
LSMEM1-201ENST00000312849 MPHOSPH8Q99549 860 aa11.11□□□□□ -0.63
LSMEM1-201ENST00000312849 SLC26A6Q9BXS9 759 aa11.11□□□□□ -0.63
LSMEM1-201ENST00000312849 BTG4Q9NY30 223 aa11.11□□□□□ -0.63
LSMEM1-201ENST00000312849 DACH1Q9UI36 760 aa11.11□□□□□ -0.63
LSMEM1-201ENST00000312849 KCNH3Q9ULD8 1083 aa11.11□□□□□ -0.63
LSMEM1-201ENST00000312849 CEP131Q9UPN4 1083 aa11.11□□□□□ -0.63
LSMEM1-201ENST00000312849 CICQ96RK0 1608 aaPredicted RBP11.11□□□□□ -0.63
LSMEM1-201ENST00000312849 USP27XA6NNY8 438 aa11.1□□□□□ -0.63
LSMEM1-201ENST00000312849 RANBP6O60518 1105 aaKnown RBP11.1□□□□□ -0.63
LSMEM1-201ENST00000312849 MMP1P03956 469 aa11.1□□□□□ -0.63
LSMEM1-201ENST00000312849 HSPA2P54652 639 aa11.1□□□□□ -0.63
LSMEM1-201ENST00000312849 WTAPQ15007 396 aa11.1□□□□□ -0.63
LSMEM1-201ENST00000312849 RTN1Q16799 776 aa11.1□□□□□ -0.63
LSMEM1-201ENST00000312849 CCDC152Q4G0S7 254 aa11.1□□□□□ -0.63
LSMEM1-201ENST00000312849 ARMCX5Q6P1M9 558 aa11.1□□□□□ -0.63
LSMEM1-201ENST00000312849 FCHSD1Q86WN1 690 aa11.1□□□□□ -0.63
LSMEM1-201ENST00000312849 CNNM3Q8NE01 707 aa11.1□□□□□ -0.63
LSMEM1-201ENST00000312849 UTP14AQ9BVJ6 771 aaKnown RBP11.1□□□□□ -0.63
LSMEM1-201ENST00000312849 EPB41L4AQ9HCS5 686 aaPredicted RBP11.1□□□□□ -0.63
LSMEM1-201ENST00000312849 OGFRQ9NZT2 677 aa11.1□□□□□ -0.63
LSMEM1-201ENST00000312849 SLU7O95391 586 aaKnown RBP11.1□□□□□ -0.63
LSMEM1-201ENST00000312849 DEXIO95424 95 aa11.1□□□□□ -0.63
LSMEM1-201ENST00000312849 IGHMBP2P38935 993 aaKnown RBP11.1□□□□□ -0.63
LSMEM1-201ENST00000312849 TDO2P48775 406 aa11.1□□□□□ -0.63
LSMEM1-201ENST00000312849 UBASH3AP57075 661 aa11.1□□□□□ -0.63
LSMEM1-201ENST00000312849 RASGRF1Q13972 1273 aa11.1□□□□□ -0.63
LSMEM1-201ENST00000312849 UTP14CQ5TAP6 766 aaKnown RBP11.1□□□□□ -0.63
LSMEM1-201ENST00000312849 DOT1LQ8TEK3 1739 aa11.1□□□□□ -0.63
LSMEM1-201ENST00000312849 CCDC34Q96HJ3 373 aa11.1□□□□□ -0.63
LSMEM1-201ENST00000312849 CDCA7Q9BWT1 371 aaPredicted RBP11.1□□□□□ -0.63
LSMEM1-201ENST00000312849 SENP2Q9HC62 589 aa11.1□□□□□ -0.63
LSMEM1-201ENST00000312849 DENND2AQ9ULE3 1009 aa11.1□□□□□ -0.63
LSMEM1-201ENST00000312849 COL22A1Q8NFW1 1626 aaPredicted RBP11.09□□□□□ -0.63
LSMEM1-201ENST00000312849 SERPINC1P01008 464 aa11.09□□□□□ -0.63
LSMEM1-201ENST00000312849 PTPREP23469 700 aa11.09□□□□□ -0.63
LSMEM1-201ENST00000312849 LMOD1P29536 600 aaPredicted RBP11.09□□□□□ -0.63
LSMEM1-201ENST00000312849 EIF5P55010 431 aaKnown RBP11.09□□□□□ -0.63
LSMEM1-201ENST00000312849 CTDSPL2Q05D32 466 aa11.09□□□□□ -0.63
LSMEM1-201ENST00000312849 CT47A1Q5JQC4 288 aaPredicted RBP11.09□□□□□ -0.63
LSMEM1-201ENST00000312849 E4F1Q66K89 784 aaPredicted RBP11.09□□□□□ -0.63
LSMEM1-201ENST00000312849 TRIML1Q8N9V2 468 aa11.09□□□□□ -0.63
LSMEM1-201ENST00000312849 ZNF397Q8NF99 534 aaPredicted RBP11.09□□□□□ -0.63
LSMEM1-201ENST00000312849 CDC5LQ99459 802 aaKnown RBP11.09□□□□□ -0.63
LSMEM1-201ENST00000312849 GTPBP4Q9BZE4 634 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms