RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 LDHBP07195 334 aaKnown RBP9.9□□□□□ -0.82
CHD6-201ENST00000309279 PRDX5P30044 214 aa9.9□□□□□ -0.82
CHD6-201ENST00000309279 PDE1AP54750 535 aa9.9□□□□□ -0.82
CHD6-201ENST00000309279 CASC1Q6TDU7 716 aa9.9□□□□□ -0.82
CHD6-201ENST00000309279 TBC1D9Q6ZT07 1266 aa9.9□□□□□ -0.82
CHD6-201ENST00000309279 USP50Q70EL3 339 aaPredicted RBP9.9□□□□□ -0.82
CHD6-201ENST00000309279 SAMD7Q7Z3H4 446 aa9.9□□□□□ -0.82
CHD6-201ENST00000309279 PLEKHM2Q8IWE5 1019 aa9.9□□□□□ -0.82
CHD6-201ENST00000309279 ZBED3Q96IU2 234 aaPredicted RBP9.9□□□□□ -0.82
CHD6-201ENST00000309279 BOLA2Q9H3K6 86 aa9.9□□□□□ -0.82
CHD6-201ENST00000309279 MYOZ2Q9NPC6 264 aa9.9□□□□□ -0.82
CHD6-201ENST00000309279 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.9□□□□□ -0.823e-13■■■■■ 105.8
CHD6-201ENST00000309279 SNRKQ9NRH2 765 aa9.9□□□□□ -0.82
CHD6-201ENST00000309279 ABCF2Q9UG63 623 aa9.9□□□□□ -0.82
CHD6-201ENST00000309279 HDAC9Q9UKV0 1011 aa9.9□□□□□ -0.82
CHD6-201ENST00000309279 DOCK2Q92608 1830 aa9.9□□□□□ -0.82
CHD6-201ENST00000309279 MAST3O60307 1309 aa9.9□□□□□ -0.82
CHD6-201ENST00000309279 ADAMTSL1Q8N6G6 1762 aa9.9□□□□□ -0.83
CHD6-201ENST00000309279 MYH2Q9UKX2 1941 aa9.89□□□□□ -0.83
CHD6-201ENST00000309279 ERC2O15083 957 aa9.89□□□□□ -0.83
CHD6-201ENST00000309279 GLRX3O76003 335 aaKnown RBP9.89□□□□□ -0.83
CHD6-201ENST00000309279 EGFRP00533 1210 aa9.89□□□□□ -0.83
CHD6-201ENST00000309279 LIG1P18858 919 aa9.89□□□□□ -0.83
CHD6-201ENST00000309279 HIRAP54198 1017 aaPredicted RBP9.89□□□□□ -0.83
CHD6-201ENST00000309279 TTF1Q15361 905 aaPredicted RBP9.89□□□□□ -0.83
CHD6-201ENST00000309279 WDR78Q5VTH9 848 aa9.89□□□□□ -0.83
CHD6-201ENST00000309279 HHIPL2Q6UWX4 724 aa9.89□□□□□ -0.83
CHD6-201ENST00000309279 FAM163AQ96GL9 167 aaPredicted RBP9.89□□□□□ -0.83
CHD6-201ENST00000309279 ANTXR1Q9H6X2 564 aa9.89□□□□□ -0.83
CHD6-201ENST00000309279 PGAP2Q9UHJ9 254 aa9.89□□□□□ -0.83
CHD6-201ENST00000309279 NDUFB9Q9Y6M9 179 aa9.89□□□□□ -0.83
CHD6-201ENST00000309279 AOX1Q06278 1338 aa9.89□□□□□ -0.83
CHD6-201ENST00000309279 POLR2AP24928 1970 aaKnown RBP9.89□□□□□ -0.83
CHD6-201ENST00000309279 F8W031 263 aaPredicted RBP9.89□□□□□ -0.83
CHD6-201ENST00000309279 WNT10BO00744 389 aa9.89□□□□□ -0.83
CHD6-201ENST00000309279 PDE4AP27815 886 aa9.89□□□□□ -0.83
CHD6-201ENST00000309279 CRKP46108 304 aa9.89□□□□□ -0.83
CHD6-201ENST00000309279 MKRN4PQ13434 485 aaPredicted RBP9.89□□□□□ -0.83
CHD6-201ENST00000309279 KIF4BQ2VIQ3 1234 aa9.89□□□□□ -0.83
CHD6-201ENST00000309279 AXDND1Q5T1B0 1012 aaPredicted RBP9.89□□□□□ -0.83
CHD6-201ENST00000309279 TSHZ3Q63HK5 1081 aa9.89□□□□□ -0.83
CHD6-201ENST00000309279 DPH6Q7L8W6 267 aa9.89□□□□□ -0.83
CHD6-201ENST00000309279 TRPM4Q8TD43 1214 aa9.89□□□□□ -0.83
CHD6-201ENST00000309279 ZNF384Q8TF68 577 aa9.89□□□□□ -0.83
CHD6-201ENST00000309279 NSUN4Q96CB9 384 aaKnown RBP9.89□□□□□ -0.83
CHD6-201ENST00000309279 PIH1D3Q9NQM4 214 aaKnown RBP9.89□□□□□ -0.83
CHD6-201ENST00000309279 PAG1Q9NWQ8 432 aa9.89□□□□□ -0.83
CHD6-201ENST00000309279 LRP2BPQ9P2M1 347 aa9.89□□□□□ -0.83
CHD6-201ENST00000309279 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.89□□□□□ -0.83
CHD6-201ENST00000309279 ECM29Q5VYK3 1845 aa9.88□□□□□ -0.83
CHD6-201ENST00000309279 KIF4AO95239 1232 aa9.88□□□□□ -0.83
CHD6-201ENST00000309279 MECOMQ03112 1051 aa9.88□□□□□ -0.83
CHD6-201ENST00000309279 CFAP100Q494V2 611 aa9.88□□□□□ -0.83
CHD6-201ENST00000309279 TBC1D10BQ4KMP7 808 aaPredicted RBP9.88□□□□□ -0.83
CHD6-201ENST00000309279 TEKT1Q969V4 418 aa9.88□□□□□ -0.83
CHD6-201ENST00000309279 ZDHHC15Q96MV8 337 aa9.88□□□□□ -0.83
CHD6-201ENST00000309279 SPOCK3Q9BQ16 436 aa9.88□□□□□ -0.83
CHD6-201ENST00000309279 USTQ9Y2C2 406 aa9.88□□□□□ -0.83
CHD6-201ENST00000309279 SH3BP1Q9Y3L3 701 aa9.88□□□□□ -0.83
CHD6-201ENST00000309279 CARNS1A5YM72 827 aa9.87□□□□□ -0.83
CHD6-201ENST00000309279 SPDYE2BA6NHP3 402 aa9.87□□□□□ -0.83
CHD6-201ENST00000309279 GOLIM4O00461 696 aa9.87□□□□□ -0.83
CHD6-201ENST00000309279 SPDYE6P0CI01 402 aa9.87□□□□□ -0.83
CHD6-201ENST00000309279 DLGAP5Q15398 846 aa9.87□□□□□ -0.83
CHD6-201ENST00000309279 NBPF9Q3BBW0 867 aa9.87□□□□□ -0.83
CHD6-201ENST00000309279 APOBEC3HQ6NTF7 200 aaKnown RBP9.87□□□□□ -0.83
CHD6-201ENST00000309279 LDHDQ86WU2 507 aa9.87□□□□□ -0.83
CHD6-201ENST00000309279 DZIP1Q86YF9 867 aaKnown RBP9.87□□□□□ -0.83
CHD6-201ENST00000309279 SLF2Q8IX21 1173 aa9.87□□□□□ -0.83
CHD6-201ENST00000309279 EDC3Q96F86 508 aaKnown RBP9.87□□□□□ -0.83
CHD6-201ENST00000309279 PRMT6Q96LA8 375 aaPredicted RBP9.87□□□□□ -0.83
CHD6-201ENST00000309279 GOPCQ9HD26 462 aa9.87□□□□□ -0.83
CHD6-201ENST00000309279 MYH7P12883 1935 aa9.87□□□□□ -0.83
CHD6-201ENST00000309279 GAKO14976 1311 aa9.87□□□□□ -0.83
CHD6-201ENST00000309279 MAST2Q6P0Q8 1798 aa9.86□□□□□ -0.83
CHD6-201ENST00000309279 TOMM70O94826 608 aa9.86□□□□□ -0.83
CHD6-201ENST00000309279 POTEIP0CG38 1075 aa9.86□□□□□ -0.83
CHD6-201ENST00000309279 POTEJP0CG39 1038 aa9.86□□□□□ -0.83
CHD6-201ENST00000309279 ZNF16P17020 682 aaPredicted RBP9.86□□□□□ -0.83
CHD6-201ENST00000309279 GSTO1P78417 241 aa9.86□□□□□ -0.83
CHD6-201ENST00000309279 MAP3K12Q12852 859 aa9.86□□□□□ -0.83
CHD6-201ENST00000309279 SF3A1Q15459 793 aaKnown RBP9.86□□□□□ -0.83
CHD6-201ENST00000309279 DIXDC1Q155Q3 683 aa9.86□□□□□ -0.83
CHD6-201ENST00000309279 NAALADL2Q58DX5 795 aa9.86□□□□□ -0.83
CHD6-201ENST00000309279 KBTBD3Q8NAB2 608 aa9.86□□□□□ -0.83
CHD6-201ENST00000309279 RAI14Q9P0K7 980 aa9.86□□□□□ -0.83
CHD6-201ENST00000309279 DAGLAQ9Y4D2 1042 aa9.86□□□□□ -0.83
CHD6-201ENST00000309279 PCDHAC2Q9Y5I4 1007 aa9.86□□□□□ -0.83
CHD6-201ENST00000309279 GPR75-ASB3A0A0A6YYF3 556 aa9.85□□□□□ -0.83
CHD6-201ENST00000309279 IDH1O75874 414 aaKnown RBP9.85□□□□□ -0.83
CHD6-201ENST00000309279 LDHCP07864 332 aa9.85□□□□□ -0.83
CHD6-201ENST00000309279 RBM5P52756 815 aaKnown RBP eCLIP9.85□□□□□ -0.83
CHD6-201ENST00000309279 NBPF20Q3BBV1 942 aa9.85□□□□□ -0.83
CHD6-201ENST00000309279 EAPPQ56P03 285 aaPredicted RBP9.85□□□□□ -0.83
CHD6-201ENST00000309279 NAA16Q6N069 864 aaPredicted RBP9.85□□□□□ -0.83
CHD6-201ENST00000309279 FAN1Q9Y2M0 1017 aa9.85□□□□□ -0.83
CHD6-201ENST00000309279 MROH7-TTC4A0A0A0MT08 1334 aa9.85□□□□□ -0.83
CHD6-201ENST00000309279 PITPNM2Q9BZ72 1349 aa9.85□□□□□ -0.83
CHD6-201ENST00000309279 MYO1BO43795 1136 aa9.85□□□□□ -0.83
CHD6-201ENST00000309279 SLC9C2Q5TAH2 1124 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms