RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 FOCADQ5VW36 1801 aa8.26□□□□□ -1.09
PTCD2-201ENST00000308077 SMIM22K7EJ46 135 aa8.26□□□□□ -1.09
PTCD2-201ENST00000308077 EXOSC10Q01780 885 aaKnown RBP8.26□□□□□ -1.09
PTCD2-201ENST00000308077 CTDSPL2Q05D32 466 aa8.26□□□□□ -1.09
PTCD2-201ENST00000308077 MAPK8IP2Q13387 824 aaPredicted RBP8.26□□□□□ -1.09
PTCD2-201ENST00000308077 CUL4AQ13619 759 aa8.26□□□□□ -1.09
PTCD2-201ENST00000308077 PODNQ7Z5L7 613 aa8.26□□□□□ -1.09
PTCD2-201ENST00000308077 PSMD1Q99460 953 aa8.26□□□□□ -1.09
PTCD2-201ENST00000308077 LRRC2Q9BYS8 371 aa8.26□□□□□ -1.09
PTCD2-201ENST00000308077 YDJCA8MPS7 323 aa8.25□□□□□ -1.09
PTCD2-201ENST00000308077 G3V3G9 751 aa8.25□□□□□ -1.09
PTCD2-201ENST00000308077 PPIP5K2O43314 1243 aa8.25□□□□□ -1.09
PTCD2-201ENST00000308077 TDO2P48775 406 aa8.25□□□□□ -1.09
PTCD2-201ENST00000308077 GSTO1P78417 241 aa8.25□□□□□ -1.09
PTCD2-201ENST00000308077 ST3GAL1Q11201 340 aa8.25□□□□□ -1.09
PTCD2-201ENST00000308077 DCAF8Q5TAQ9 597 aa8.25□□□□□ -1.09
PTCD2-201ENST00000308077 MB21D2Q8IYB1 491 aaPredicted RBP8.25□□□□□ -1.09
PTCD2-201ENST00000308077 RTKN2Q8IZC4 609 aa8.25□□□□□ -1.09
PTCD2-201ENST00000308077 SUPT20HQ8NEM7 779 aa8.25□□□□□ -1.09
PTCD2-201ENST00000308077 SH3RF3Q8TEJ3 882 aaPredicted RBP8.25□□□□□ -1.09
PTCD2-201ENST00000308077 P2RX7Q99572 595 aaKnown RBP8.25□□□□□ -1.09
PTCD2-201ENST00000308077 NACAP1Q9BZK3 213 aa8.25□□□□□ -1.09
PTCD2-201ENST00000308077 INCENPQ9NQS7 918 aa8.25□□□□□ -1.09
PTCD2-201ENST00000308077 LIMCH1Q9UPQ0 1083 aa8.25□□□□□ -1.09
PTCD2-201ENST00000308077 CD2APQ9Y5K6 639 aa8.25□□□□□ -1.09
PTCD2-201ENST00000308077 GAKO14976 1311 aa8.25□□□□□ -1.09
PTCD2-201ENST00000308077 NEDD4P46934 1319 aa8.25□□□□□ -1.09
PTCD2-201ENST00000308077 ARFGEF1Q9Y6D6 1849 aa8.25□□□□□ -1.09
PTCD2-201ENST00000308077 HSP90AA1P07900 732 aaKnown RBP8.25□□□□□ -1.09
PTCD2-201ENST00000308077 BTDP43251 543 aa8.25□□□□□ -1.09
PTCD2-201ENST00000308077 ANTXR2P58335 489 aa8.25□□□□□ -1.09
PTCD2-201ENST00000308077 PPP4CP60510 307 aa8.25□□□□□ -1.09
PTCD2-201ENST00000308077 EVX2Q03828 476 aa8.25□□□□□ -1.09
PTCD2-201ENST00000308077 GRIPAP1Q4V328 841 aa8.25□□□□□ -1.09
PTCD2-201ENST00000308077 Q6ZUG5 572 aa8.25□□□□□ -1.09
PTCD2-201ENST00000308077 DHX32Q7L7V1 743 aaKnown RBP8.25□□□□□ -1.09
PTCD2-201ENST00000308077 CHST3Q7LGC8 479 aa8.25□□□□□ -1.09
PTCD2-201ENST00000308077 CRNKL1Q9BZJ0 848 aaKnown RBP8.25□□□□□ -1.09
PTCD2-201ENST00000308077 DCP1AQ9NPI6 582 aaPredicted RBP8.25□□□□□ -1.09
PTCD2-201ENST00000308077 ZNF277Q9NRM2 450 aaPredicted RBP8.25□□□□□ -1.09
PTCD2-201ENST00000308077 TPCN1Q9ULQ1 816 aa8.25□□□□□ -1.09
PTCD2-201ENST00000308077 CYP2D7A0A087X1C5 515 aa8.24□□□□□ -1.09
PTCD2-201ENST00000308077 GPR75-ASB3A0A0A6YYF3 556 aa8.24□□□□□ -1.09
PTCD2-201ENST00000308077 F8W031 263 aaPredicted RBP8.24□□□□□ -1.09
PTCD2-201ENST00000308077 LDHCP07864 332 aa8.24□□□□□ -1.09
PTCD2-201ENST00000308077 HMGB1P09429 215 aaKnown RBP8.24□□□□□ -1.09
PTCD2-201ENST00000308077 PPARAQ07869 468 aa8.24□□□□□ -1.09
PTCD2-201ENST00000308077 NBR1Q14596 966 aa8.24□□□□□ -1.09
PTCD2-201ENST00000308077 ME3Q16798 604 aa8.24□□□□□ -1.09
PTCD2-201ENST00000308077 DALRD3Q5D0E6 543 aaKnown RBP8.24□□□□□ -1.09
PTCD2-201ENST00000308077 DACT2Q5SW24 774 aa8.24□□□□□ -1.09
PTCD2-201ENST00000308077 GIMAP6Q6P9H5 292 aa8.24□□□□□ -1.09
PTCD2-201ENST00000308077 CTR9Q6PD62 1173 aa8.24□□□□□ -1.09
PTCD2-201ENST00000308077 NCOA7Q8NI08 942 aa8.24□□□□□ -1.09
PTCD2-201ENST00000308077 FAM163AQ96GL9 167 aaPredicted RBP8.24□□□□□ -1.09
PTCD2-201ENST00000308077 AGXT2Q9BYV1 514 aa8.24□□□□□ -1.09
PTCD2-201ENST00000308077 SUGT1Q9Y2Z0 365 aa8.24□□□□□ -1.09
PTCD2-201ENST00000308077 DAGLAQ9Y4D2 1042 aa8.24□□□□□ -1.09
PTCD2-201ENST00000308077 ECM29Q5VYK3 1845 aa8.24□□□□□ -1.09
PTCD2-201ENST00000308077 RHBDL3P58872 404 aa8.24□□□□□ -1.09
PTCD2-201ENST00000308077 STRIP1Q5VSL9 837 aa8.24□□□□□ -1.09
PTCD2-201ENST00000308077 CYB5R4Q7L1T6 521 aa8.24□□□□□ -1.09
PTCD2-201ENST00000308077 STAG1Q8WVM7 1258 aa8.24□□□□□ -1.09
PTCD2-201ENST00000308077 GPHNQ9NQX3 736 aaPredicted RBP8.24□□□□□ -1.09
PTCD2-201ENST00000308077 ANAPC4Q9UJX5 808 aa8.24□□□□□ -1.09
PTCD2-201ENST00000308077 TTF2Q9UNY4 1162 aaKnown RBP8.24□□□□□ -1.09
PTCD2-201ENST00000308077 MYH1P12882 1939 aa8.23□□□□□ -1.09
PTCD2-201ENST00000308077 USP17L3A6NCW0 530 aa8.23□□□□□ -1.09
PTCD2-201ENST00000308077 USP17L4A6NCW7 530 aa8.23□□□□□ -1.09
PTCD2-201ENST00000308077 MINDY4BA8MYZ0 360 aa8.23□□□□□ -1.09
PTCD2-201ENST00000308077 B4E1Z4 1266 aa8.23□□□□□ -1.09
PTCD2-201ENST00000308077 PRC1O43663 620 aa8.23□□□□□ -1.09
PTCD2-201ENST00000308077 BAG3O95817 575 aa8.23□□□□□ -1.09
PTCD2-201ENST00000308077 CYP2D6P10635 497 aa8.23□□□□□ -1.09
PTCD2-201ENST00000308077 SCNN1DP51172 638 aa8.23□□□□□ -1.09
PTCD2-201ENST00000308077 FKBP1AP62942 108 aaKnown RBP8.23□□□□□ -1.09
PTCD2-201ENST00000308077 DGKZQ13574 1117 aa8.23□□□□□ -1.09
PTCD2-201ENST00000308077 ANKRD1Q15327 319 aa8.23□□□□□ -1.09
PTCD2-201ENST00000308077 AKNAD1Q5T1N1 836 aa8.23□□□□□ -1.09
PTCD2-201ENST00000308077 SOGA3Q5TF21 947 aa8.23□□□□□ -1.09
PTCD2-201ENST00000308077 USP17L1Q7RTZ2 530 aa8.23□□□□□ -1.09
PTCD2-201ENST00000308077 STK11IPQ8N1F8 1099 aa8.23□□□□□ -1.09
PTCD2-201ENST00000308077 BRF1Q92994 677 aa8.23□□□□□ -1.09
PTCD2-201ENST00000308077 ZSCAN31Q96LW9 406 aaPredicted RBP8.23□□□□□ -1.09
PTCD2-201ENST00000308077 ATP8A2Q9NTI2 1148 aa8.23□□□□□ -1.09
PTCD2-201ENST00000308077 CHMP5Q9NZZ3 219 aa8.23□□□□□ -1.09
PTCD2-201ENST00000308077 GOLGB1Q14789 3259 aaKnown RBP8.22□□□□□ -1.09
PTCD2-201ENST00000308077 USP17L12C9JPN9 530 aa8.22□□□□□ -1.09
PTCD2-201ENST00000308077 USP17L21D6R901 530 aa8.22□□□□□ -1.09
PTCD2-201ENST00000308077 NFKBIEO00221 500 aa8.22□□□□□ -1.09
PTCD2-201ENST00000308077 DTNBO60941 627 aa8.22□□□□□ -1.09
PTCD2-201ENST00000308077 MCM5P33992 734 aa8.22□□□□□ -1.09
PTCD2-201ENST00000308077 VEGFBP49765 207 aa8.22□□□□□ -1.09
PTCD2-201ENST00000308077 FOXK2Q01167 660 aa8.22□□□□□ -1.09
PTCD2-201ENST00000308077 RALYLQ86SE5 291 aaKnown RBP8.22□□□□□ -1.09
PTCD2-201ENST00000308077 CCDC83Q8IWF9 413 aa8.22□□□□□ -1.09
PTCD2-201ENST00000308077 SLF2Q8IX21 1173 aa8.22□□□□□ -1.09
PTCD2-201ENST00000308077 LARGE2Q8N3Y3 721 aa8.22□□□□□ -1.09
PTCD2-201ENST00000308077 FBXL16Q8N461 479 aa8.22□□□□□ -1.09
PTCD2-201ENST00000308077 NECAB1Q8N987 351 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms