RNA–Protein interactions for RNA: ENST00000304621.10

TTC39C-201, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TTC39C, Length 2,304 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-201ENST00000304621 GPR75-ASB3A0A0A6YYF3 556 aa6.84□□□□□ -1.31
TTC39C-201ENST00000304621 MINDY4BA8MYZ0 360 aa6.84□□□□□ -1.31
TTC39C-201ENST00000304621 USP17L12C9JPN9 530 aa6.84□□□□□ -1.31
TTC39C-201ENST00000304621 USP17L21D6R901 530 aa6.84□□□□□ -1.31
TTC39C-201ENST00000304621 HSP90AA1P07900 732 aaKnown RBP6.84□□□□□ -1.31
TTC39C-201ENST00000304621 USP17L8P0C7I0 530 aa6.84□□□□□ -1.31
TTC39C-201ENST00000304621 RHBDL3P58872 404 aa6.84□□□□□ -1.31
TTC39C-201ENST00000304621 PPP4CP60510 307 aa6.84□□□□□ -1.31
TTC39C-201ENST00000304621 STK3Q13188 491 aa6.84□□□□□ -1.31
TTC39C-201ENST00000304621 CC2D2BQ6DHV5 1058 aa6.84□□□□□ -1.31
TTC39C-201ENST00000304621 PODNQ7Z5L7 613 aa6.84□□□□□ -1.31
TTC39C-201ENST00000304621 TBC1D22AQ8WUA7 517 aa6.84□□□□□ -1.31
TTC39C-201ENST00000304621 BRF1Q92994 677 aa6.84□□□□□ -1.31
TTC39C-201ENST00000304621 PSMD1Q99460 953 aa6.84□□□□□ -1.31
TTC39C-201ENST00000304621 ZDHHC9Q9Y397 364 aa6.84□□□□□ -1.31
TTC39C-201ENST00000304621 FER1L6Q2WGJ9 1857 aa6.84□□□□□ -1.31
TTC39C-201ENST00000304621 PSME4Q14997 1843 aa6.84□□□□□ -1.31
TTC39C-201ENST00000304621 G3V3G9 751 aa6.84□□□□□ -1.31
TTC39C-201ENST00000304621 NFKBIEO00221 500 aa6.84□□□□□ -1.31
TTC39C-201ENST00000304621 PRC1O43663 620 aa6.84□□□□□ -1.31
TTC39C-201ENST00000304621 GSTO1P78417 241 aa6.84□□□□□ -1.31
TTC39C-201ENST00000304621 DALRD3Q5D0E6 543 aaKnown RBP6.84□□□□□ -1.31
TTC39C-201ENST00000304621 AKNAD1Q5T1N1 836 aa6.84□□□□□ -1.31
TTC39C-201ENST00000304621 DCAF8Q5TAQ9 597 aa6.84□□□□□ -1.31
TTC39C-201ENST00000304621 NCOA7Q8NI08 942 aa6.84□□□□□ -1.31
TTC39C-201ENST00000304621 TGFBRAP1Q8WUH2 860 aa6.84□□□□□ -1.31
TTC39C-201ENST00000304621 STAG1Q8WVM7 1258 aa6.84□□□□□ -1.31
TTC39C-201ENST00000304621 FAM163AQ96GL9 167 aaPredicted RBP6.84□□□□□ -1.31
TTC39C-201ENST00000304621 CRNKL1Q9BZJ0 848 aaKnown RBP6.84□□□□□ -1.31
TTC39C-201ENST00000304621 NACAP1Q9BZK3 213 aa6.84□□□□□ -1.31
TTC39C-201ENST00000304621 CHMP5Q9NZZ3 219 aa6.84□□□□□ -1.31
TTC39C-201ENST00000304621 ANAPC4Q9UJX5 808 aa6.84□□□□□ -1.31
TTC39C-201ENST00000304621 BRPF3Q9ULD4 1205 aa6.84□□□□□ -1.31
TTC39C-201ENST00000304621 TTF2Q9UNY4 1162 aaKnown RBP6.84□□□□□ -1.31
TTC39C-201ENST00000304621 CD2APQ9Y5K6 639 aa6.84□□□□□ -1.31
TTC39C-201ENST00000304621 FOCADQ5VW36 1801 aa6.83□□□□□ -1.32
TTC39C-201ENST00000304621 HMGB1P09429 215 aaKnown RBP6.83□□□□□ -1.32
TTC39C-201ENST00000304621 STRIP1Q5VSL9 837 aa6.83□□□□□ -1.32
TTC39C-201ENST00000304621 RAB11FIP4Q86YS3 637 aa6.83□□□□□ -1.32
TTC39C-201ENST00000304621 KIAA0825Q8IV33 1275 aa6.83□□□□□ -1.32
TTC39C-201ENST00000304621 MAPKAPK5Q8IW41 473 aa6.83□□□□□ -1.32
TTC39C-201ENST00000304621 RTKN2Q8IZC4 609 aa6.83□□□□□ -1.32
TTC39C-201ENST00000304621 SUPT20HQ8NEM7 779 aa6.83□□□□□ -1.32
TTC39C-201ENST00000304621 ZSWIM5Q9P217 1185 aa6.83□□□□□ -1.32
TTC39C-201ENST00000304621 SAP30BPQ9UHR5 308 aaKnown RBP6.83□□□□□ -1.32
TTC39C-201ENST00000304621 USP17L3A6NCW0 530 aa6.83□□□□□ -1.32
TTC39C-201ENST00000304621 USP17L4A6NCW7 530 aa6.83□□□□□ -1.32
TTC39C-201ENST00000304621 KDM4AO75164 1064 aa6.83□□□□□ -1.32
TTC39C-201ENST00000304621 PRDM1O75626 825 aa6.83□□□□□ -1.32
TTC39C-201ENST00000304621 RAD17O75943 681 aa6.83□□□□□ -1.32
TTC39C-201ENST00000304621 LDHCP07864 332 aa6.83□□□□□ -1.32
TTC39C-201ENST00000304621 MCM5P33992 734 aa6.83□□□□□ -1.32
TTC39C-201ENST00000304621 RASSF7Q02833 373 aa6.83□□□□□ -1.32
TTC39C-201ENST00000304621 RRP12Q5JTH9 1297 aaKnown RBP6.83□□□□□ -1.32
TTC39C-201ENST00000304621 APOBEC3HQ6NTF7 200 aaKnown RBP6.83□□□□□ -1.32
TTC39C-201ENST00000304621 GIMAP6Q6P9H5 292 aa6.83□□□□□ -1.32
TTC39C-201ENST00000304621 USP17L1Q7RTZ2 530 aa6.83□□□□□ -1.32
TTC39C-201ENST00000304621 IGDCC4Q8TDY8 1250 aa6.83□□□□□ -1.32
TTC39C-201ENST00000304621 DYNLL2Q96FJ2 89 aa6.83□□□□□ -1.32
TTC39C-201ENST00000304621 INTS4Q96HW7 963 aaKnown RBP6.83□□□□□ -1.32
TTC39C-201ENST00000304621 CHAMP1Q96JM3 812 aa6.83□□□□□ -1.32
TTC39C-201ENST00000304621 ZKSCAN3Q9BRR0 538 aa6.83□□□□□ -1.32
TTC39C-201ENST00000304621 NCOA5Q9HCD5 579 aaKnown RBP6.83□□□□□ -1.32
TTC39C-201ENST00000304621 DDX4Q9NQI0 724 aaKnown RBP6.83□□□□□ -1.32
TTC39C-201ENST00000304621 ATP8A2Q9NTI2 1148 aa6.83□□□□□ -1.32
TTC39C-201ENST00000304621 BCS1LQ9Y276 419 aa6.83□□□□□ -1.32
TTC39C-201ENST00000304621 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.83□□□□□ -1.32
TTC39C-201ENST00000304621 FLT1P17948 1338 aa6.82□□□□□ -1.32
TTC39C-201ENST00000304621 SH2B2O14492 632 aaPredicted RBP6.82□□□□□ -1.32
TTC39C-201ENST00000304621 PPFIA3O75145 1194 aa6.82□□□□□ -1.32
TTC39C-201ENST00000304621 CTDNEP1O95476 244 aa6.82□□□□□ -1.32
TTC39C-201ENST00000304621 USP5P45974 858 aa6.82□□□□□ -1.32
TTC39C-201ENST00000304621 PLCD1P51178 756 aa6.82□□□□□ -1.32
TTC39C-201ENST00000304621 SCRN1Q12765 414 aa6.82□□□□□ -1.32
TTC39C-201ENST00000304621 RAB3GAP1Q15042 981 aa6.82□□□□□ -1.32
TTC39C-201ENST00000304621 SBK1Q52WX2 424 aa6.82□□□□□ -1.32
TTC39C-201ENST00000304621 C12orf60Q5U649 245 aa6.82□□□□□ -1.32
TTC39C-201ENST00000304621 TMED8Q6PL24 325 aaPredicted RBP6.82□□□□□ -1.32
TTC39C-201ENST00000304621 MFSD6Q6ZSS7 791 aa6.82□□□□□ -1.32
TTC39C-201ENST00000304621 RALYLQ86SE5 291 aaKnown RBP6.82□□□□□ -1.32
TTC39C-201ENST00000304621 TEX11Q8IYF3 940 aa6.82□□□□□ -1.32
TTC39C-201ENST00000304621 LARGE2Q8N3Y3 721 aa6.82□□□□□ -1.32
TTC39C-201ENST00000304621 FBXL16Q8N461 479 aa6.82□□□□□ -1.32
TTC39C-201ENST00000304621 ZSCAN31Q96LW9 406 aaPredicted RBP6.82□□□□□ -1.32
TTC39C-201ENST00000304621 SH2B1Q9NRF2 756 aaPredicted RBP6.82□□□□□ -1.32
TTC39C-201ENST00000304621 MCM9Q9NXL9 1143 aa6.82□□□□□ -1.32
TTC39C-201ENST00000304621 CIZ1Q9ULV3 898 aaPredicted RBP6.82□□□□□ -1.32
TTC39C-201ENST00000304621 HPS5Q9UPZ3 1129 aa6.82□□□□□ -1.32
TTC39C-201ENST00000304621 SUGT1Q9Y2Z0 365 aa6.82□□□□□ -1.32
TTC39C-201ENST00000304621 PSMD14O00487 310 aa6.82□□□□□ -1.32
TTC39C-201ENST00000304621 JAK2O60674 1132 aa6.82□□□□□ -1.32
TTC39C-201ENST00000304621 PFKFB2O60825 505 aa6.82□□□□□ -1.32
TTC39C-201ENST00000304621 IGSF3O75054 1194 aa6.82□□□□□ -1.32
TTC39C-201ENST00000304621 WDHD1O75717 1129 aaPredicted RBP6.82□□□□□ -1.32
TTC39C-201ENST00000304621 BAG3O95817 575 aa6.82□□□□□ -1.32
TTC39C-201ENST00000304621 FGRP09769 529 aa6.82□□□□□ -1.32
TTC39C-201ENST00000304621 SLURP2P0DP57 97 aa6.82□□□□□ -1.32
TTC39C-201ENST00000304621 PDIA3P30101 505 aaKnown RBP6.82□□□□□ -1.32
TTC39C-201ENST00000304621 IARSP41252 1262 aaKnown RBP6.82□□□□□ -1.32
TTC39C-201ENST00000304621 CRKP46108 304 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms