RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 ZSWIM5Q9P217 1185 aa8.39□□□□□ -1.07
RGPD3-201ENST00000304514 BCAMP50895 628 aa8.38□□□□□ -1.07
RGPD3-201ENST00000304514 CCDC152Q4G0S7 254 aa8.38□□□□□ -1.07
RGPD3-201ENST00000304514 LINC00116Q8NCU8 138 aa8.38□□□□□ -1.07
RGPD3-201ENST00000304514 AIDAQ96BJ3 306 aa8.38□□□□□ -1.07
RGPD3-201ENST00000304514 CDKL5O76039 1030 aa8.38□□□□□ -1.07
RGPD3-201ENST00000304514 GNAT2P19087 354 aa8.38□□□□□ -1.07
RGPD3-201ENST00000304514 RXRAP19793 462 aa8.38□□□□□ -1.07
RGPD3-201ENST00000304514 KRT40Q6A162 431 aa8.38□□□□□ -1.07
RGPD3-201ENST00000304514 KIAA1468Q9P260 1216 aa8.38□□□□□ -1.07
RGPD3-201ENST00000304514 FGRP09769 529 aa8.38□□□□□ -1.07
RGPD3-201ENST00000304514 RCAN1P53805 252 aa8.38□□□□□ -1.07
RGPD3-201ENST00000304514 NCAPHQ15003 741 aa8.38□□□□□ -1.07
RGPD3-201ENST00000304514 UBE2Q2Q8WVN8 375 aa8.38□□□□□ -1.07
RGPD3-201ENST00000304514 PHKBQ93100 1093 aa8.38□□□□□ -1.07
RGPD3-201ENST00000304514 ALG1Q9BT22 464 aa8.38□□□□□ -1.07
RGPD3-201ENST00000304514 CNNM2Q9H8M5 875 aa8.38□□□□□ -1.07
RGPD3-201ENST00000304514 TUBE1Q9UJT0 475 aa8.38□□□□□ -1.07
RGPD3-201ENST00000304514 LOC102724428A0A0B4J2F2 783 aa8.38□□□□□ -1.07
RGPD3-201ENST00000304514 KINO60870 393 aaKnown RBP8.38□□□□□ -1.07
RGPD3-201ENST00000304514 GUCY1A2P33402 732 aa8.38□□□□□ -1.07
RGPD3-201ENST00000304514 SIK1P57059 783 aa8.38□□□□□ -1.07
RGPD3-201ENST00000304514 DPCR1Q3MIW9 517 aa8.38□□□□□ -1.07
RGPD3-201ENST00000304514 ZNF384Q8TF68 577 aa8.38□□□□□ -1.07
RGPD3-201ENST00000304514 CACTINQ8WUQ7 758 aaKnown RBP8.38□□□□□ -1.07
RGPD3-201ENST00000304514 ERCC4Q92889 916 aaPredicted RBP8.38□□□□□ -1.07
RGPD3-201ENST00000304514 MORC2Q9Y6X9 1032 aaPredicted RBP8.38□□□□□ -1.07
RGPD3-201ENST00000304514 RGL2O15211 777 aa8.37□□□□□ -1.07
RGPD3-201ENST00000304514 TOB1P50616 345 aaPredicted RBP8.37□□□□□ -1.07
RGPD3-201ENST00000304514 SF3A1Q15459 793 aaKnown RBP8.37□□□□□ -1.07
RGPD3-201ENST00000304514 AKNAD1Q5T1N1 836 aa8.37□□□□□ -1.07
RGPD3-201ENST00000304514 MTA3Q9BTC8 594 aa8.37□□□□□ -1.07
RGPD3-201ENST00000304514 TRIM5Q9C035 493 aa8.37□□□□□ -1.07
RGPD3-201ENST00000304514 KRT23Q9C075 422 aa8.37□□□□□ -1.07
RGPD3-201ENST00000304514 SNAP23O00161 211 aa8.37□□□□□ -1.07
RGPD3-201ENST00000304514 ZBTB22O15209 634 aa8.37□□□□□ -1.07
RGPD3-201ENST00000304514 ZNF202O95125 648 aa8.37□□□□□ -1.07
RGPD3-201ENST00000304514 MMP1P03956 469 aa8.37□□□□□ -1.07
RGPD3-201ENST00000304514 RBM10P98175 930 aaKnown RBP8.37□□□□□ -1.07
RGPD3-201ENST00000304514 PLCB2Q00722 1185 aa8.37□□□□□ -1.07
RGPD3-201ENST00000304514 VPS37DQ86XT2 251 aa8.37□□□□□ -1.07
RGPD3-201ENST00000304514 AOPEPQ8N6M6 819 aa8.37□□□□□ -1.07
RGPD3-201ENST00000304514 MAP3K12Q12852 859 aa8.37□□□□□ -1.07
RGPD3-201ENST00000304514 STK11IPQ8N1F8 1099 aa8.37□□□□□ -1.07
RGPD3-201ENST00000304514 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.37□□□□□ -1.07
RGPD3-201ENST00000304514 ZBTB43O43298 467 aa8.37□□□□□ -1.07
RGPD3-201ENST00000304514 STK38Q15208 465 aa8.37□□□□□ -1.07
RGPD3-201ENST00000304514 SEC23AQ15436 765 aa8.37□□□□□ -1.07
RGPD3-201ENST00000304514 ERFEQ4G0M1 354 aa8.37□□□□□ -1.07
RGPD3-201ENST00000304514 SYTL4Q96C24 671 aaPredicted RBP8.37□□□□□ -1.07
RGPD3-201ENST00000304514 MYL10Q9BUA6 226 aa8.37□□□□□ -1.07
RGPD3-201ENST00000304514 PDS5AQ29RF7 1337 aaKnown RBP8.37□□□□□ -1.07
RGPD3-201ENST00000304514 ARID5BQ14865 1188 aa8.37□□□□□ -1.07
RGPD3-201ENST00000304514 TMEM67Q5HYA8 995 aa8.37□□□□□ -1.07
RGPD3-201ENST00000304514 ANKRD7Q92527 254 aa8.37□□□□□ -1.07
RGPD3-201ENST00000304514 ACSBG1Q96GR2 724 aa8.37□□□□□ -1.07
RGPD3-201ENST00000304514 RIOK1Q9BRS2 568 aaKnown RBP8.37□□□□□ -1.07
RGPD3-201ENST00000304514 OSBPL5Q9H0X9 879 aaPredicted RBP8.37□□□□□ -1.07
RGPD3-201ENST00000304514 GOLGA8AA7E2F4 631 aa8.36□□□□□ -1.07
RGPD3-201ENST00000304514 PPARAQ07869 468 aa8.36□□□□□ -1.07
RGPD3-201ENST00000304514 TRDNQ13061 729 aa8.36□□□□□ -1.07
RGPD3-201ENST00000304514 CNTNAP4Q9C0A0 1308 aa8.36□□□□□ -1.07
RGPD3-201ENST00000304514 USP27XA6NNY8 438 aa8.36□□□□□ -1.07
RGPD3-201ENST00000304514 SSRP1Q08945 709 aaKnown RBP8.36□□□□□ -1.07
RGPD3-201ENST00000304514 DDB1Q16531 1140 aa8.36□□□□□ -1.07
RGPD3-201ENST00000304514 NYAP1Q6ZVC0 841 aa8.36□□□□□ -1.07
RGPD3-201ENST00000304514 SLC4A4Q9Y6R1 1079 aa8.36□□□□□ -1.07
RGPD3-201ENST00000304514 NRXN2Q9P2S2 1712 aa8.36□□□□□ -1.07
RGPD3-201ENST00000304514 METTL16Q86W50 562 aaKnown RBP8.36□□□□□ -1.07
RGPD3-201ENST00000304514 CPLX1O14810 134 aa8.36□□□□□ -1.07
RGPD3-201ENST00000304514 NT5DC1Q5TFE4 455 aa8.36□□□□□ -1.07
RGPD3-201ENST00000304514 CEP57L1Q8IYX8 460 aa8.36□□□□□ -1.07
RGPD3-201ENST00000304514 ADAMTSL1Q8N6G6 1762 aa8.36□□□□□ -1.07
RGPD3-201ENST00000304514 NAT10Q9H0A0 1025 aaKnown RBP8.36□□□□□ -1.07
RGPD3-201ENST00000304514 BSDC1Q9NW68 430 aaPredicted RBP8.36□□□□□ -1.07
RGPD3-201ENST00000304514 FBXO2Q9UK22 296 aaPredicted RBP8.36□□□□□ -1.07
RGPD3-201ENST00000304514 WTIPA6NIX2 430 aaPredicted RBP8.35□□□□□ -1.07
RGPD3-201ENST00000304514 RIOK3O14730 519 aaKnown RBP8.35□□□□□ -1.07
RGPD3-201ENST00000304514 IFNAR1P17181 557 aa8.35□□□□□ -1.07
RGPD3-201ENST00000304514 SF3B3Q15393 1217 aaKnown RBP8.35□□□□□ -1.07
RGPD3-201ENST00000304514 BCL2L12Q9HB09 334 aa8.35□□□□□ -1.07
RGPD3-201ENST00000304514 NIP7Q9Y221 180 aaKnown RBP eCLIP8.35□□□□□ -1.07
RGPD3-201ENST00000304514 SLC12A7Q9Y666 1083 aa8.35□□□□□ -1.07
RGPD3-201ENST00000304514 IKBKBO14920 756 aa8.35□□□□□ -1.07
RGPD3-201ENST00000304514 MFSD6Q6ZSS7 791 aa8.35□□□□□ -1.07
RGPD3-201ENST00000304514 MICU3Q86XE3 530 aa8.35□□□□□ -1.07
RGPD3-201ENST00000304514 IMPACTQ9P2X3 320 aa8.35□□□□□ -1.07
RGPD3-201ENST00000304514 APPP05067 770 aa8.35□□□□□ -1.07
RGPD3-201ENST00000304514 IGHMBP2P38935 993 aaKnown RBP8.35□□□□□ -1.07
RGPD3-201ENST00000304514 CLEC4GQ6UXB4 293 aa8.35□□□□□ -1.07
RGPD3-201ENST00000304514 CRACR2BQ8N4Y2 399 aaPredicted RBP8.35□□□□□ -1.07
RGPD3-201ENST00000304514 NAPBQ9H115 298 aa8.35□□□□□ -1.07
RGPD3-201ENST00000304514 GREB1LQ9C091 1923 aaPredicted RBP8.35□□□□□ -1.07
RGPD3-201ENST00000304514 CCDC69A6NI79 296 aa8.35□□□□□ -1.07
RGPD3-201ENST00000304514 NEMFO60524 1076 aa8.35□□□□□ -1.07
RGPD3-201ENST00000304514 FUT2Q10981 343 aa8.35□□□□□ -1.07
RGPD3-201ENST00000304514 NOSTRINQ8IVI9 506 aa8.35□□□□□ -1.07
RGPD3-201ENST00000304514 CDC5LQ99459 802 aaKnown RBP8.35□□□□□ -1.07
RGPD3-201ENST00000304514 FOXP1Q9H334 677 aaPredicted RBP8.35□□□□□ -1.07
RGPD3-201ENST00000304514 CUTAO60888 179 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms