RNA–Protein interactions for RNA: ENST00000303795.8

APLF-201, Transcript of aprataxin and PNKP like factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APLF, Length 3,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-201ENST00000303795 PSD3Q9NYI0 1048 aa13.59□□□□□ -0.23
APLF-201ENST00000303795 TOP1P11387 765 aaKnown RBP13.58□□□□□ -0.23
APLF-201ENST00000303795 SCARF1Q14162 830 aa13.58□□□□□ -0.23
APLF-201ENST00000303795 KARSQ15046 597 aaKnown RBP13.58□□□□□ -0.23
APLF-201ENST00000303795 FAM98CQ17RN3 349 aaKnown RBP13.58□□□□□ -0.23
APLF-201ENST00000303795 LONRF3Q496Y0 759 aa13.58□□□□□ -0.23
APLF-201ENST00000303795 VPS18Q9P253 973 aa13.58□□□□□ -0.23
APLF-201ENST00000303795 DENND2AQ9ULE3 1009 aa13.58□□□□□ -0.23
APLF-201ENST00000303795 ZNF174Q15697 407 aa13.58□□□□□ -0.24
APLF-201ENST00000303795 FAM47AQ5JRC9 791 aa13.58□□□□□ -0.24
APLF-201ENST00000303795 NBPF5PQ86XG9 351 aaPredicted RBP13.58□□□□□ -0.24
APLF-201ENST00000303795 PGBD1Q96JS3 809 aa13.58□□□□□ -0.24
APLF-201ENST00000303795 SAP30BPQ9UHR5 308 aaKnown RBP13.58□□□□□ -0.24
APLF-201ENST00000303795 RPS6KA5O75582 802 aa13.58□□□□□ -0.24
APLF-201ENST00000303795 GNG11P61952 73 aa13.58□□□□□ -0.24
APLF-201ENST00000303795 PICALMQ13492 652 aa13.58□□□□□ -0.24
APLF-201ENST00000303795 STX1AQ16623 288 aa13.58□□□□□ -0.24
APLF-201ENST00000303795 TANGO6Q9C0B7 1094 aa13.58□□□□□ -0.24
APLF-201ENST00000303795 FMN2Q9NZ56 1722 aa13.58□□□□□ -0.24
APLF-201ENST00000303795 BAZ2BQ9UIF8 2168 aaKnown RBP13.57□□□□□ -0.24
APLF-201ENST00000303795 M0R2C6 588 aa13.57□□□□□ -0.24
APLF-201ENST00000303795 KIF2AO00139 706 aaPredicted RBP13.57□□□□□ -0.24
APLF-201ENST00000303795 RIMBP2O15034 1052 aa13.57□□□□□ -0.24
APLF-201ENST00000303795 GSCP56915 257 aaPredicted RBP13.57□□□□□ -0.24
APLF-201ENST00000303795 CLIC4Q9Y696 253 aa13.57□□□□□ -0.24
APLF-201ENST00000303795 H0YHG0 523 aa13.57□□□□□ -0.24
APLF-201ENST00000303795 ATP5JP18859 108 aa13.57□□□□□ -0.24
APLF-201ENST00000303795 UBASH3AP57075 661 aa13.57□□□□□ -0.24
APLF-201ENST00000303795 EVCP57679 992 aa13.57□□□□□ -0.24
APLF-201ENST00000303795 E2F4Q16254 413 aa13.57□□□□□ -0.24
APLF-201ENST00000303795 GUCY2CP25092 1073 aa13.57□□□□□ -0.24
APLF-201ENST00000303795 KCNJ6P48051 423 aa13.57□□□□□ -0.24
APLF-201ENST00000303795 ARFGAP3Q9NP61 516 aa13.57□□□□□ -0.24
APLF-201ENST00000303795 NEMFO60524 1076 aa13.56□□□□□ -0.24
APLF-201ENST00000303795 CDKL5O76039 1030 aa13.56□□□□□ -0.24
APLF-201ENST00000303795 IDEP14735 1019 aa13.56□□□□□ -0.24
APLF-201ENST00000303795 PPFIBP1Q86W92 1011 aa13.56□□□□□ -0.24
APLF-201ENST00000303795 CLSTN2Q9H4D0 955 aa13.56□□□□□ -0.24
APLF-201ENST00000303795 RABEP2Q9H5N1 569 aa13.56□□□□□ -0.24
APLF-201ENST00000303795 AOX1Q06278 1338 aa13.56□□□□□ -0.24
APLF-201ENST00000303795 CDC25AP30304 524 aa13.56□□□□□ -0.24
APLF-201ENST00000303795 POLA2Q14181 598 aa13.56□□□□□ -0.24
APLF-201ENST00000303795 NECTIN1Q15223 517 aa13.56□□□□□ -0.24
APLF-201ENST00000303795 RTN1Q16799 776 aa13.56□□□□□ -0.24
APLF-201ENST00000303795 OSBPL5Q9H0X9 879 aaPredicted RBP13.56□□□□□ -0.24
APLF-201ENST00000303795 NBPF26B4DH59 902 aa13.56□□□□□ -0.24
APLF-201ENST00000303795 CASQ1P31415 396 aa13.56□□□□□ -0.24
APLF-201ENST00000303795 NBPF14Q5TI25 921 aa13.56□□□□□ -0.24
APLF-201ENST00000303795 NBPF10Q6P3W6 841 aaKnown RBP13.56□□□□□ -0.24
APLF-201ENST00000303795 C11orf57Q6ZUT1 292 aaPredicted RBP13.56□□□□□ -0.24
APLF-201ENST00000303795 IQCA1Q86XH1 822 aa13.56□□□□□ -0.24
APLF-201ENST00000303795 NBPF15Q8N660 670 aa13.56□□□□□ -0.24
APLF-201ENST00000303795 CTCFLQ8NI51 663 aaPredicted RBP13.56□□□□□ -0.24
APLF-201ENST00000303795 AATFQ9NY61 560 aaKnown RBP eCLIP13.56□□□□□ -0.24
APLF-201ENST00000303795 V9GY48 417 aaPredicted RBP13.56□□□□□ -0.24
APLF-201ENST00000303795 JCADQ9P266 1359 aa13.55□□□□□ -0.24
APLF-201ENST00000303795 TADA3O75528 432 aa13.55□□□□□ -0.24
APLF-201ENST00000303795 IPO7O95373 1038 aaKnown RBP13.55□□□□□ -0.24
APLF-201ENST00000303795 MCM7P33993 719 aa13.55□□□□□ -0.24
APLF-201ENST00000303795 TTC31Q49AM3 519 aaPredicted RBP13.55□□□□□ -0.24
APLF-201ENST00000303795 ICE2Q659A1 982 aa13.55□□□□□ -0.24
APLF-201ENST00000303795 GRAMD1CQ8IYS0 662 aa13.55□□□□□ -0.24
APLF-201ENST00000303795 GPR101Q96P66 508 aaPredicted RBP13.55□□□□□ -0.24
APLF-201ENST00000303795 LOC102724159A0A0B4J2E5 919 aa13.55□□□□□ -0.24
APLF-201ENST00000303795 PWP2Q15269 919 aaKnown RBP13.55□□□□□ -0.24
APLF-201ENST00000303795 ANKRD20A12PQ8NF67 263 aa13.55□□□□□ -0.24
APLF-201ENST00000303795 ZNF622Q969S3 477 aaKnown RBP eCLIP13.55□□□□□ -0.24
APLF-201ENST00000303795 MCM9Q9NXL9 1143 aa13.55□□□□□ -0.24
APLF-201ENST00000303795 VPS54Q9P1Q0 977 aa13.55□□□□□ -0.24
APLF-201ENST00000303795 DLC1Q96QB1 1528 aa13.55□□□□□ -0.24
APLF-201ENST00000303795 PNOCQ13519 176 aa13.55□□□□□ -0.24
APLF-201ENST00000303795 SMC1AQ14683 1233 aaKnown RBP13.55□□□□□ -0.24
APLF-201ENST00000303795 AXDND1Q5T1B0 1012 aaPredicted RBP13.55□□□□□ -0.24
APLF-201ENST00000303795 CCDC102BQ68D86 513 aa13.55□□□□□ -0.24
APLF-201ENST00000303795 ZSCAN16Q9H4T2 348 aaPredicted RBP13.55□□□□□ -0.24
APLF-201ENST00000303795 LZTFL1Q9NQ48 299 aa13.55□□□□□ -0.24
APLF-201ENST00000303795 NPHP4O75161 1426 aaPredicted RBP13.55□□□□□ -0.24
APLF-201ENST00000303795 KDRP35968 1356 aa13.54□□□□□ -0.24
APLF-201ENST00000303795 H3BQF6 201 aa13.54□□□□□ -0.24
APLF-201ENST00000303795 CPP00450 1065 aa13.54□□□□□ -0.24
APLF-201ENST00000303795 TCIRG1Q13488 830 aa13.54□□□□□ -0.24
APLF-201ENST00000303795 NAA16Q6N069 864 aaPredicted RBP13.54□□□□□ -0.24
APLF-201ENST00000303795 FBXO18Q8NFZ0 1043 aa13.54□□□□□ -0.24
APLF-201ENST00000303795 UTP14AQ9BVJ6 771 aaKnown RBP13.54□□□□□ -0.24
APLF-201ENST00000303795 CEP170BQ9Y4F5 1589 aaPredicted RBP13.54□□□□□ -0.24
APLF-201ENST00000303795 ZNF335Q9H4Z2 1342 aaPredicted RBP13.54□□□□□ -0.24
APLF-201ENST00000303795 BTBD18B2RXH4 712 aa13.54□□□□□ -0.24
APLF-201ENST00000303795 MNAT1P51948 309 aa13.54□□□□□ -0.24
APLF-201ENST00000303795 PPP1R13BQ96KQ4 1090 aa13.54□□□□□ -0.24
APLF-201ENST00000303795 PLEKHA4Q9H4M7 779 aa13.54□□□□□ -0.24
APLF-201ENST00000303795 MAST3O60307 1309 aa13.54□□□□□ -0.24
APLF-201ENST00000303795 SPATA31D1Q6ZQQ2 1576 aa13.54□□□□□ -0.24
APLF-201ENST00000303795 VWA3AA6NCI4 1184 aa13.54□□□□□ -0.24
APLF-201ENST00000303795 UBE2Q2LH0YL09 131 aa13.54□□□□□ -0.24
APLF-201ENST00000303795 MAP2K7O14733 419 aa13.54□□□□□ -0.24
APLF-201ENST00000303795 POLR2DO15514 142 aaKnown RBP13.54□□□□□ -0.24
APLF-201ENST00000303795 CCT6AP40227 531 aaKnown RBP13.54□□□□□ -0.24
APLF-201ENST00000303795 ANKRD18AQ8IVF6 992 aa13.54□□□□□ -0.24
APLF-201ENST00000303795 CAGE1Q8TC20 777 aa13.54□□□□□ -0.24
APLF-201ENST00000303795 ADAMTSL3P82987 1691 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms