RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 EZH2Q15910 746 aaKnown RBP12.41□□□□□ -0.42
CLP1-201ENST00000302731 STYK1Q6J9G0 422 aa12.41□□□□□ -0.42
CLP1-201ENST00000302731 CTR9Q6PD62 1173 aa12.41□□□□□ -0.42
CLP1-201ENST00000302731 SLC51AQ86UW1 340 aa12.41□□□□□ -0.42
CLP1-201ENST00000302731 SLF2Q8IX21 1173 aa12.41□□□□□ -0.42
CLP1-201ENST00000302731 KLHL34Q8N239 644 aa12.41□□□□□ -0.42
CLP1-201ENST00000302731 MPNDQ8N594 471 aa12.41□□□□□ -0.42
CLP1-201ENST00000302731 DDX11Q96FC9 970 aa12.41□□□□□ -0.42
CLP1-201ENST00000302731 CNPY2Q9Y2B0 182 aa12.41□□□□□ -0.42
CLP1-201ENST00000302731 ELP1O95163 1332 aa12.41□□□□□ -0.42
CLP1-201ENST00000302731 COL11A2P13942 1736 aaPredicted RBP12.41□□□□□ -0.42
CLP1-201ENST00000302731 TCHHQ07283 1943 aa12.41□□□□□ -0.42
CLP1-201ENST00000302731 MINDY4BA8MYZ0 360 aa12.4□□□□□ -0.42
CLP1-201ENST00000302731 C6orf229H3BNL8 230 aa12.4□□□□□ -0.42
CLP1-201ENST00000302731 ZBTB43O43298 467 aa12.4□□□□□ -0.42
CLP1-201ENST00000302731 ORC4O43929 436 aa12.4□□□□□ -0.42
CLP1-201ENST00000302731 SLC3A2P08195 630 aaKnown RBP12.4□□□□□ -0.42
CLP1-201ENST00000302731 METAP2P50579 478 aaKnown RBP eCLIP12.4□□□□□ -0.42
CLP1-201ENST00000302731 DNM1Q05193 864 aaKnown RBP12.4□□□□□ -0.42
CLP1-201ENST00000302731 RESTQ13127 1097 aa12.4□□□□□ -0.42
CLP1-201ENST00000302731 PPP2R5BQ15173 497 aa12.4□□□□□ -0.42
CLP1-201ENST00000302731 ATL3Q6DD88 541 aa12.4□□□□□ -0.42
CLP1-201ENST00000302731 NKX2-3Q8TAU0 364 aa12.4□□□□□ -0.42
CLP1-201ENST00000302731 SYAP1Q96A49 352 aaPredicted RBP12.4□□□□□ -0.42
CLP1-201ENST00000302731 NOL10Q9BSC4 688 aaKnown RBP12.4□□□□□ -0.42
CLP1-201ENST00000302731 SCAND2PQ9GZW5 306 aaPredicted RBP12.4□□□□□ -0.42
CLP1-201ENST00000302731 ANO8Q9HCE9 1232 aaPredicted RBP12.4□□□□□ -0.42
CLP1-201ENST00000302731 MKRN1Q9UHC7 482 aaKnown RBP12.4□□□□□ -0.42
CLP1-201ENST00000302731 SLC12A7Q9Y666 1083 aa12.4□□□□□ -0.42
CLP1-201ENST00000302731 LAMB1P07942 1786 aa12.4□□□□□ -0.42
CLP1-201ENST00000302731 MROH7-TTC4A0A0A0MT08 1334 aa12.4□□□□□ -0.42
CLP1-201ENST00000302731 CCDC69A6NI79 296 aa12.4□□□□□ -0.42
CLP1-201ENST00000302731 USP17L12C9JPN9 530 aa12.4□□□□□ -0.42
CLP1-201ENST00000302731 USP17L21D6R901 530 aa12.4□□□□□ -0.42
CLP1-201ENST00000302731 FDPSP14324 419 aaKnown RBP12.4□□□□□ -0.42
CLP1-201ENST00000302731 PLCG2P16885 1265 aa12.4□□□□□ -0.42
CLP1-201ENST00000302731 EN1Q05925 392 aaPredicted RBP12.4□□□□□ -0.42
CLP1-201ENST00000302731 WTAPQ15007 396 aa12.4□□□□□ -0.42
CLP1-201ENST00000302731 CAVIN1Q6NZI2 390 aaKnown RBP12.4□□□□□ -0.42
CLP1-201ENST00000302731 SYNE3Q6ZMZ3 975 aa12.4□□□□□ -0.42
CLP1-201ENST00000302731 NFXL1Q6ZNB6 911 aa12.4□□□□□ -0.42
CLP1-201ENST00000302731 GPR101Q96P66 508 aaPredicted RBP12.4□□□□□ -0.42
CLP1-201ENST00000302731 INCENPQ9NQS7 918 aa12.4□□□□□ -0.42
CLP1-201ENST00000302731 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.4□□□□□ -0.42
CLP1-201ENST00000302731 GPR75-ASB3A0A0A6YYF3 556 aa12.39□□□□□ -0.43
CLP1-201ENST00000302731 H0YIN7 160 aa12.39□□□□□ -0.43
CLP1-201ENST00000302731 DTNBO60941 627 aa12.39□□□□□ -0.43
CLP1-201ENST00000302731 FOXD4L6Q3SYB3 417 aaPredicted RBP12.39□□□□□ -0.43
CLP1-201ENST00000302731 RRP12Q5JTH9 1297 aaKnown RBP12.39□□□□□ -0.43
CLP1-201ENST00000302731 FOXD4L3Q6VB84 417 aaPredicted RBP12.39□□□□□ -0.43
CLP1-201ENST00000302731 EYA3Q99504 573 aa12.39□□□□□ -0.43
CLP1-201ENST00000302731 UBAC1Q9BSL1 405 aa12.39□□□□□ -0.43
CLP1-201ENST00000302731 ZC3H12CQ9C0D7 883 aaKnown RBP12.39□□□□□ -0.43
CLP1-201ENST00000302731 GDPD2Q9HCC8 539 aa12.39□□□□□ -0.43
CLP1-201ENST00000302731 TOMM22Q9NS69 142 aa12.39□□□□□ -0.43
CLP1-201ENST00000302731 ORC3Q9UBD5 711 aaPredicted RBP12.39□□□□□ -0.43
CLP1-201ENST00000302731 JAG2Q9Y219 1238 aa12.39□□□□□ -0.43
CLP1-201ENST00000302731 BAZ2AQ9UIF9 1905 aaKnown RBP12.38□□□□□ -0.43
CLP1-201ENST00000302731 ROBO3Q96MS0 1386 aa12.38□□□□□ -0.43
CLP1-201ENST00000302731 GAKO14976 1311 aa12.38□□□□□ -0.43
CLP1-201ENST00000302731 STK36Q9NRP7 1315 aa12.38□□□□□ -0.43
CLP1-201ENST00000302731 CCDC196A0A1B0GTZ2 297 aa12.38□□□□□ -0.43
CLP1-201ENST00000302731 FIBPO43427 364 aa12.38□□□□□ -0.43
CLP1-201ENST00000302731 BAG6P46379 1132 aa12.38□□□□□ -0.43
CLP1-201ENST00000302731 MRE11P49959 708 aa12.38□□□□□ -0.43
CLP1-201ENST00000302731 SEC23AQ15436 765 aa12.38□□□□□ -0.43
CLP1-201ENST00000302731 ZSCAN23Q3MJ62 389 aa12.38□□□□□ -0.43
CLP1-201ENST00000302731 MFSD14BQ5SR56 506 aa12.38□□□□□ -0.43
CLP1-201ENST00000302731 MSL1Q68DK7 614 aa12.38□□□□□ -0.43
CLP1-201ENST00000302731 DPP8Q6V1X1 898 aaPredicted RBP12.38□□□□□ -0.43
CLP1-201ENST00000302731 FERMT3Q86UX7 667 aa12.38□□□□□ -0.43
CLP1-201ENST00000302731 IQCA1Q86XH1 822 aa12.38□□□□□ -0.43
CLP1-201ENST00000302731 C2CD5Q86YS7 1000 aa12.38□□□□□ -0.43
CLP1-201ENST00000302731 CNKSR1Q969H4 720 aa12.38□□□□□ -0.43
CLP1-201ENST00000302731 RTFDC1Q9BY42 306 aaPredicted RBP12.38□□□□□ -0.43
CLP1-201ENST00000302731 CFAP45Q9UL16 551 aa12.38□□□□□ -0.43
CLP1-201ENST00000302731 GOLGA8AA7E2F4 631 aa12.37□□□□□ -0.43
CLP1-201ENST00000302731 GADD45BO75293 160 aaPredicted RBP12.37□□□□□ -0.43
CLP1-201ENST00000302731 PDE4BQ07343 736 aa12.37□□□□□ -0.43
CLP1-201ENST00000302731 SF3B2Q13435 895 aaKnown RBP12.37□□□□□ -0.43
CLP1-201ENST00000302731 NTRK3Q16288 839 aa12.37□□□□□ -0.43
CLP1-201ENST00000302731 MICU3Q86XE3 530 aa12.37□□□□□ -0.43
CLP1-201ENST00000302731 AMOTL1Q8IY63 956 aa12.37□□□□□ -0.43
CLP1-201ENST00000302731 FBXO18Q8NFZ0 1043 aa12.37□□□□□ -0.43
CLP1-201ENST00000302731 C8orf76Q96K31 380 aa12.37□□□□□ -0.43
CLP1-201ENST00000302731 FAM217BQ9NTX9 383 aaPredicted RBP12.37□□□□□ -0.43
CLP1-201ENST00000302731 TMEM63CQ9P1W3 806 aa12.37□□□□□ -0.43
CLP1-201ENST00000302731 MYH2Q9UKX2 1941 aa12.37□□□□□ -0.43
CLP1-201ENST00000302731 TNKSO95271 1327 aa12.37□□□□□ -0.43
CLP1-201ENST00000302731 IFNAR1P17181 557 aa12.37□□□□□ -0.43
CLP1-201ENST00000302731 ADD1P35611 737 aaKnown RBP12.37□□□□□ -0.43
CLP1-201ENST00000302731 DIXDC1Q155Q3 683 aa12.37□□□□□ -0.43
CLP1-201ENST00000302731 GRIK5Q16478 980 aa12.37□□□□□ -0.43
CLP1-201ENST00000302731 C12orf60Q5U649 245 aa12.37□□□□□ -0.43
CLP1-201ENST00000302731 CC2D2BQ6DHV5 1058 aa12.37□□□□□ -0.43
CLP1-201ENST00000302731 ZNF622Q969S3 477 aaKnown RBP eCLIP12.37□□□□□ -0.43
CLP1-201ENST00000302731 ZSCAN10Q96SZ4 725 aaPredicted RBP12.37□□□□□ -0.43
CLP1-201ENST00000302731 SENP2Q9HC62 589 aa12.37□□□□□ -0.43
CLP1-201ENST00000302731 MCM9Q9NXL9 1143 aa12.37□□□□□ -0.43
CLP1-201ENST00000302731 DLEC1Q9Y238 1755 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms