RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 MAP3K9P80192 1104 aa13.82□□□□□ -0.2
CLCC1-201ENST00000302500 TTLL12Q14166 644 aaPredicted RBP13.82□□□□□ -0.2
CLCC1-201ENST00000302500 NOL9Q5SY16 702 aaKnown RBP13.82□□□□□ -0.2
CLCC1-201ENST00000302500 METTL16Q86W50 562 aaKnown RBP13.82□□□□□ -0.2
CLCC1-201ENST00000302500 DCTPP1Q9H773 170 aa13.82□□□□□ -0.2
CLCC1-201ENST00000302500 LOC285556D6RIA3 1793 aa13.82□□□□□ -0.2
CLCC1-201ENST00000302500 ZSWIM8A7E2V4 1837 aa13.82□□□□□ -0.2
CLCC1-201ENST00000302500 TCRBV5S4A2TA0A5A2 114 aa13.81□□□□□ -0.2
CLCC1-201ENST00000302500 RAB11FIP3O75154 756 aa13.81□□□□□ -0.2
CLCC1-201ENST00000302500 TRPA1O75762 1119 aa13.81□□□□□ -0.2
CLCC1-201ENST00000302500 MAP4K4O95819 1239 aaPredicted RBP13.81□□□□□ -0.2
CLCC1-201ENST00000302500 INPP5BP32019 993 aa13.81□□□□□ -0.2
CLCC1-201ENST00000302500 TCP10Q12799 353 aa13.81□□□□□ -0.2
CLCC1-201ENST00000302500 RRP1BQ14684 758 aaKnown RBP13.81□□□□□ -0.2
CLCC1-201ENST00000302500 HSP90AB4PQ58FF6 505 aa13.81□□□□□ -0.2
CLCC1-201ENST00000302500 CCDC158Q5M9N0 1113 aa13.81□□□□□ -0.2
CLCC1-201ENST00000302500 TTC39AQ5SRH9 613 aa13.81□□□□□ -0.2
CLCC1-201ENST00000302500 AACSQ86V21 672 aa13.81□□□□□ -0.2
CLCC1-201ENST00000302500 DZIP1Q86YF9 867 aaKnown RBP13.81□□□□□ -0.2
CLCC1-201ENST00000302500 IFNL1Q8IU54 200 aa13.81□□□□□ -0.2
CLCC1-201ENST00000302500 ZKSCAN4Q969J2 545 aaPredicted RBP13.81□□□□□ -0.2
CLCC1-201ENST00000302500 OPTNQ96CV9 577 aa13.81□□□□□ -0.2
CLCC1-201ENST00000302500 SALL3Q9BXA9 1300 aa13.81□□□□□ -0.2
CLCC1-201ENST00000302500 NAV1Q8NEY1 1877 aa13.8□□□□□ -0.2
CLCC1-201ENST00000302500 MKRN3Q13064 507 aaKnown RBP13.8□□□□□ -0.2
CLCC1-201ENST00000302500 OS9Q13438 667 aaPredicted RBP13.8□□□□□ -0.2
CLCC1-201ENST00000302500 MIGA2Q7L4E1 593 aa13.8□□□□□ -0.2
CLCC1-201ENST00000302500 TNS4Q8IZW8 715 aa13.8□□□□□ -0.2
CLCC1-201ENST00000302500 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.8□□□□□ -0.2
CLCC1-201ENST00000302500 BRI3BPQ8WY22 251 aa13.8□□□□□ -0.2
CLCC1-201ENST00000302500 SLC10A4Q96EP9 437 aa13.8□□□□□ -0.2
CLCC1-201ENST00000302500 DNAJC18Q9H819 358 aa13.8□□□□□ -0.2
CLCC1-201ENST00000302500 ELP3Q9H9T3 547 aa13.8□□□□□ -0.2
CLCC1-201ENST00000302500 TNRC18O15417 2968 aaPredicted RBP13.79□□□□□ -0.2
CLCC1-201ENST00000302500 MANSC4A6NHS7 340 aaPredicted RBP13.79□□□□□ -0.2
CLCC1-201ENST00000302500 TBC1D12O60347 775 aa13.79□□□□□ -0.2
CLCC1-201ENST00000302500 HMMRO75330 724 aa13.79□□□□□ -0.2
CLCC1-201ENST00000302500 GORABQ5T7V8 394 aa13.79□□□□□ -0.2
CLCC1-201ENST00000302500 SH3RF3Q8TEJ3 882 aaPredicted RBP13.79□□□□□ -0.2
CLCC1-201ENST00000302500 WRNIP1Q96S55 665 aa13.79□□□□□ -0.2
CLCC1-201ENST00000302500 RIOK1Q9BRS2 568 aaKnown RBP13.79□□□□□ -0.2
CLCC1-201ENST00000302500 OSBPL5Q9H0X9 879 aaPredicted RBP13.79□□□□□ -0.2
CLCC1-201ENST00000302500 CHMP4BQ9H444 224 aaKnown RBP13.79□□□□□ -0.2
CLCC1-201ENST00000302500 TMOD2Q9NZR1 351 aa13.79□□□□□ -0.2
CLCC1-201ENST00000302500 KCNH4Q9UQ05 1017 aa13.79□□□□□ -0.2
CLCC1-201ENST00000302500 IRF6O14896 467 aa13.78□□□□□ -0.2
CLCC1-201ENST00000302500 ATP5JP18859 108 aa13.78□□□□□ -0.2
CLCC1-201ENST00000302500 INHBEP58166 350 aa13.78□□□□□ -0.2
CLCC1-201ENST00000302500 SREBF2Q12772 1141 aa13.78□□□□□ -0.2
CLCC1-201ENST00000302500 ERO1BQ86YB8 467 aa13.78□□□□□ -0.2
CLCC1-201ENST00000302500 SLF2Q8IX21 1173 aa13.78□□□□□ -0.2
CLCC1-201ENST00000302500 EDC3Q96F86 508 aaKnown RBP13.78□□□□□ -0.2
CLCC1-201ENST00000302500 BEGAINQ9BUH8 593 aa13.78□□□□□ -0.2
CLCC1-201ENST00000302500 ZNF341Q9BYN7 854 aa13.78□□□□□ -0.2
CLCC1-201ENST00000302500 ADGRA2Q96PE1 1338 aa13.78□□□□□ -0.2
CLCC1-201ENST00000302500 TBC1D8O95759 1140 aa13.77□□□□□ -0.21
CLCC1-201ENST00000302500 CHGBP05060 677 aa13.77□□□□□ -0.21
CLCC1-201ENST00000302500 GSTO1P78417 241 aa13.77□□□□□ -0.21
CLCC1-201ENST00000302500 PPIL2Q13356 520 aa13.77□□□□□ -0.21
CLCC1-201ENST00000302500 TMED8Q6PL24 325 aaPredicted RBP13.77□□□□□ -0.21
CLCC1-201ENST00000302500 FAM43AQ8N2R8 423 aa13.77□□□□□ -0.21
CLCC1-201ENST00000302500 ZNF296Q8WUU4 475 aaPredicted RBP13.77□□□□□ -0.21
CLCC1-201ENST00000302500 AATFQ9NY61 560 aaKnown RBP eCLIP13.77□□□□□ -0.21
CLCC1-201ENST00000302500 RAI14Q9P0K7 980 aa13.77□□□□□ -0.21
CLCC1-201ENST00000302500 LRP2BPQ9P2M1 347 aa13.77□□□□□ -0.21
CLCC1-201ENST00000302500 FLT1P17948 1338 aa13.77□□□□□ -0.21
CLCC1-201ENST00000302500 SMARCA5O60264 1052 aaPredicted RBP13.76□□□□□ -0.21
CLCC1-201ENST00000302500 LDHCP07864 332 aa13.76□□□□□ -0.21
CLCC1-201ENST00000302500 DYNLL1P63167 89 aaKnown RBP13.76□□□□□ -0.21
CLCC1-201ENST00000302500 JAG1P78504 1218 aa13.76□□□□□ -0.21
CLCC1-201ENST00000302500 PPATQ06203 517 aa13.76□□□□□ -0.21
CLCC1-201ENST00000302500 DCAF15Q66K64 600 aa13.76□□□□□ -0.21
CLCC1-201ENST00000302500 NAA16Q6N069 864 aaPredicted RBP13.76□□□□□ -0.21
CLCC1-201ENST00000302500 CLASRPQ8N2M8 674 aaKnown RBP13.76□□□□□ -0.21
CLCC1-201ENST00000302500 HOOK2Q96ED9 719 aa13.76□□□□□ -0.21
CLCC1-201ENST00000302500 CRBNQ96SW2 442 aa13.76□□□□□ -0.21
CLCC1-201ENST00000302500 BAZ2AQ9UIF9 1905 aaKnown RBP13.76□□□□□ -0.21
CLCC1-201ENST00000302500 GPR25O00155 361 aa13.75□□□□□ -0.21
CLCC1-201ENST00000302500 OTUD5Q96G74 571 aa13.75□□□□□ -0.21
CLCC1-201ENST00000302500 HAUS7Q99871 368 aa13.75□□□□□ -0.21
CLCC1-201ENST00000302500 LRRCC1Q9C099 1032 aa13.75□□□□□ -0.21
CLCC1-201ENST00000302500 MCOLN1Q9GZU1 580 aa13.75□□□□□ -0.21
CLCC1-201ENST00000302500 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.75□□□□□ -0.21
CLCC1-201ENST00000302500 FAM196BA6NMK8 535 aa13.74□□□□□ -0.21
CLCC1-201ENST00000302500 PDE6AP16499 860 aa13.74□□□□□ -0.21
CLCC1-201ENST00000302500 CRHR2Q13324 411 aa13.74□□□□□ -0.21
CLCC1-201ENST00000302500 PICALMQ13492 652 aa13.74□□□□□ -0.21
CLCC1-201ENST00000302500 SLFNL1Q499Z3 407 aa13.74□□□□□ -0.21
CLCC1-201ENST00000302500 GPAT2Q6NUI2 795 aa13.74□□□□□ -0.21
CLCC1-201ENST00000302500 SCYL3Q8IZE3 742 aa13.74□□□□□ -0.21
CLCC1-201ENST00000302500 MAGEB6Q8N7X4 407 aa13.74□□□□□ -0.21
CLCC1-201ENST00000302500 ABHD8Q96I13 439 aa13.74□□□□□ -0.21
CLCC1-201ENST00000302500 GREB1LQ9C091 1923 aaPredicted RBP13.74□□□□□ -0.21
CLCC1-201ENST00000302500 ZCCHC17Q9NP64 241 aaKnown RBP13.74□□□□□ -0.21
CLCC1-201ENST00000302500 AFG3L2Q9Y4W6 797 aa13.74□□□□□ -0.21
CLCC1-201ENST00000302500 CSADQ9Y600 493 aa13.74□□□□□ -0.21
CLCC1-201ENST00000302500 MGAMO43451 1857 aa13.73□□□□□ -0.21
CLCC1-201ENST00000302500 RBBP6Q7Z6E9 1792 aaKnown RBP13.73□□□□□ -0.21
CLCC1-201ENST00000302500 BTBD19C9JJ37 291 aa13.73□□□□□ -0.21
CLCC1-201ENST00000302500 APBB1O00213 710 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms